BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0908 (699 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 56 1e-09 AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 56 1e-09 AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 56 1e-09 AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 56 1e-09 U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 50 5e-08 AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 29 0.011 AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 28 0.33 AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 28 0.33 DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 27 0.57 CR954257-8|CAJ14159.1| 562|Anopheles gambiae putative esterase ... 25 3.0 >AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. Length = 188 Score = 56.0 bits (129), Expect = 1e-09 Identities = 36/84 (42%), Positives = 44/84 (52%), Gaps = 1/84 (1%) Frame = +1 Query: 394 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WS-VSPLTTARSL 570 HYT G E+VD VLD +RK + C LQGF + HS GGGT G S + R + Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60 Query: 571 NWSSPSTPRLRFPLPVVEPYNSIL 642 N S P + VVEPYN+ L Sbjct: 61 NTYS-VVPSPKVSDTVVEPYNATL 83 Score = 37.9 bits (84), Expect = 3e-04 Identities = 17/63 (26%), Positives = 34/63 (53%) Frame = +3 Query: 510 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTARRRALQLYSTTHTTLEHSDCAFMVD 689 GSG +LL+ ++ +Y + +++ P+P+VS + H +E++D + +D Sbjct: 40 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCID 99 Query: 690 NEA 698 NEA Sbjct: 100 NEA 102 >AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. Length = 188 Score = 56.0 bits (129), Expect = 1e-09 Identities = 36/84 (42%), Positives = 44/84 (52%), Gaps = 1/84 (1%) Frame = +1 Query: 394 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WS-VSPLTTARSL 570 HYT G E+VD VLD +RK + C LQGF + HS GGGT G S + R + Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60 Query: 571 NWSSPSTPRLRFPLPVVEPYNSIL 642 N S P + VVEPYN+ L Sbjct: 61 NTYS-VVPSPKVSDTVVEPYNATL 83 Score = 37.9 bits (84), Expect = 3e-04 Identities = 17/63 (26%), Positives = 34/63 (53%) Frame = +3 Query: 510 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTARRRALQLYSTTHTTLEHSDCAFMVD 689 GSG +LL+ ++ +Y + +++ P+P+VS + H +E++D + +D Sbjct: 40 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCID 99 Query: 690 NEA 698 NEA Sbjct: 100 NEA 102 >AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. Length = 188 Score = 56.0 bits (129), Expect = 1e-09 Identities = 36/84 (42%), Positives = 44/84 (52%), Gaps = 1/84 (1%) Frame = +1 Query: 394 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WS-VSPLTTARSL 570 HYT G E+VD VLD +RK + C LQGF + HS GGGT G S + R + Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60 Query: 571 NWSSPSTPRLRFPLPVVEPYNSIL 642 N S P + VVEPYN+ L Sbjct: 61 NTYS-VVPSPKVSDTVVEPYNATL 83 Score = 37.9 bits (84), Expect = 3e-04 Identities = 17/63 (26%), Positives = 34/63 (53%) Frame = +3 Query: 510 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTARRRALQLYSTTHTTLEHSDCAFMVD 689 GSG +LL+ ++ +Y + +++ P+P+VS + H +E++D + +D Sbjct: 40 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCID 99 Query: 690 NEA 698 NEA Sbjct: 100 NEA 102 >AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. Length = 188 Score = 56.0 bits (129), Expect = 1e-09 Identities = 36/84 (42%), Positives = 44/84 (52%), Gaps = 1/84 (1%) Frame = +1 Query: 394 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WS-VSPLTTARSL 570 HYT G E+VD VLD +RK + C LQGF + HS GGGT G S + R + Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60 Query: 571 NWSSPSTPRLRFPLPVVEPYNSIL 642 N S P + VVEPYN+ L Sbjct: 61 NTYS-VVPSPKVSDTVVEPYNATL 83 Score = 37.9 bits (84), Expect = 3e-04 Identities = 17/63 (26%), Positives = 34/63 (53%) Frame = +3 Query: 510 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTARRRALQLYSTTHTTLEHSDCAFMVD 689 GSG +LL+ ++ +Y + +++ P+P+VS + H +E++D + +D Sbjct: 40 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCID 99 Query: 690 NEA 698 NEA Sbjct: 100 NEA 102 >U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles gambiae putativetubulin alpha chain mRNA, complete cds. ). Length = 91 Score = 50.4 bits (115), Expect = 5e-08 Identities = 20/22 (90%), Positives = 21/22 (95%) Frame = +2 Query: 77 MRECISVHVGQAGVQIGNACWE 142 MRECISVHVGQAGVQIGN CW+ Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22 Score = 35.9 bits (79), Expect = 0.001 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = +3 Query: 132 PAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAARTPC 269 P T WS AS+ RCP+TR S E +++ + + P LA + C Sbjct: 19 PCWDCTVWSMASNRTVRCPRTRRS--EAVMTRSTPSSPRLAQASTC 62 >AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase protein. Length = 1248 Score = 29.5 bits (63), Expect(2) = 0.011 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +3 Query: 183 CPQTRPSGVETILSTLSSARPELAARTPCCLR 278 C RPS ++ ++ S RP+LAA + C R Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAANSATCWR 195 Score = 21.8 bits (44), Expect(2) = 0.011 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +3 Query: 126 VMPAGSFTAWSTASSLMARCPQTRPSGV 209 V+ AG F AW TA +T+P G+ Sbjct: 116 VLLAGDFNAWHTAWG----SERTKPKGI 139 >AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. Length = 334 Score = 27.9 bits (59), Expect = 0.33 Identities = 16/43 (37%), Positives = 19/43 (44%) Frame = +1 Query: 547 PLTTARSLNWSSPSTPRLRFPLPVVEPYNSILPPTQPLSTLTV 675 P TT + W+ P T P P S LPP P +T TV Sbjct: 180 PPTTTTTTVWTDP-TATTTTPAPTTTTTWSDLPPPPPTTTTTV 221 >AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. Length = 334 Score = 27.9 bits (59), Expect = 0.33 Identities = 16/43 (37%), Positives = 19/43 (44%) Frame = +1 Query: 547 PLTTARSLNWSSPSTPRLRFPLPVVEPYNSILPPTQPLSTLTV 675 P TT + W+ P T P P S LPP P +T TV Sbjct: 180 PPTTTTTTVWTDP-TATTTTPAPTTTTTWSDLPPPPPTTTTTV 221 >DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. Length = 889 Score = 27.1 bits (57), Expect = 0.57 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +1 Query: 538 SVSPLTTARSLNWSSPSTPRLRFPLPVVEPYNSILPPTQPLS 663 SVSP+ + + PS LR P P +P S+ P ++ LS Sbjct: 360 SVSPVPSLPVRSSPEPSPVLLRSPTPAKKPLISVAPASKLLS 401 >CR954257-8|CAJ14159.1| 562|Anopheles gambiae putative esterase protein. Length = 562 Score = 24.6 bits (51), Expect = 3.0 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +1 Query: 481 LIFHSFGGGTALGSLPY*WSVSPLTTARSLNWSSPSTPRLRF 606 L+ S+ G +PY WSV+ LT + L + T RF Sbjct: 446 LMLGSWPGAMHADDIPYLWSVTDLTISPILPTNHARTVSNRF 487 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 815,433 Number of Sequences: 2352 Number of extensions: 17620 Number of successful extensions: 37 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 31 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 37 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 71086350 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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