Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0908
(699 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 56 1e-09
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 56 1e-09
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 56 1e-09
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 56 1e-09
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 50 5e-08
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 29 0.011
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 28 0.33
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 28 0.33
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 27 0.57
CR954257-8|CAJ14159.1| 562|Anopheles gambiae putative esterase ... 25 3.0
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 56.0 bits (129), Expect = 1e-09
Identities = 36/84 (42%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 394 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WS-VSPLTTARSL 570
HYT G E+VD VLD +RK + C LQGF + HS GGGT G S + R +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 571 NWSSPSTPRLRFPLPVVEPYNSIL 642
N S P + VVEPYN+ L
Sbjct: 61 NTYS-VVPSPKVSDTVVEPYNATL 83
Score = 37.9 bits (84), Expect = 3e-04
Identities = 17/63 (26%), Positives = 34/63 (53%)
Frame = +3
Query: 510 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTARRRALQLYSTTHTTLEHSDCAFMVD 689
GSG +LL+ ++ +Y + +++ P+P+VS + H +E++D + +D
Sbjct: 40 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCID 99
Query: 690 NEA 698
NEA
Sbjct: 100 NEA 102
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 56.0 bits (129), Expect = 1e-09
Identities = 36/84 (42%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 394 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WS-VSPLTTARSL 570
HYT G E+VD VLD +RK + C LQGF + HS GGGT G S + R +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 571 NWSSPSTPRLRFPLPVVEPYNSIL 642
N S P + VVEPYN+ L
Sbjct: 61 NTYS-VVPSPKVSDTVVEPYNATL 83
Score = 37.9 bits (84), Expect = 3e-04
Identities = 17/63 (26%), Positives = 34/63 (53%)
Frame = +3
Query: 510 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTARRRALQLYSTTHTTLEHSDCAFMVD 689
GSG +LL+ ++ +Y + +++ P+P+VS + H +E++D + +D
Sbjct: 40 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCID 99
Query: 690 NEA 698
NEA
Sbjct: 100 NEA 102
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 56.0 bits (129), Expect = 1e-09
Identities = 36/84 (42%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 394 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WS-VSPLTTARSL 570
HYT G E+VD VLD +RK + C LQGF + HS GGGT G S + R +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 571 NWSSPSTPRLRFPLPVVEPYNSIL 642
N S P + VVEPYN+ L
Sbjct: 61 NTYS-VVPSPKVSDTVVEPYNATL 83
Score = 37.9 bits (84), Expect = 3e-04
Identities = 17/63 (26%), Positives = 34/63 (53%)
Frame = +3
Query: 510 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTARRRALQLYSTTHTTLEHSDCAFMVD 689
GSG +LL+ ++ +Y + +++ P+P+VS + H +E++D + +D
Sbjct: 40 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCID 99
Query: 690 NEA 698
NEA
Sbjct: 100 NEA 102
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 56.0 bits (129), Expect = 1e-09
Identities = 36/84 (42%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 394 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTALGSLPY*WS-VSPLTTARSL 570
HYT G E+VD VLD +RK + C LQGF + HS GGGT G S + R +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 571 NWSSPSTPRLRFPLPVVEPYNSIL 642
N S P + VVEPYN+ L
Sbjct: 61 NTYS-VVPSPKVSDTVVEPYNATL 83
Score = 37.9 bits (84), Expect = 3e-04
Identities = 17/63 (26%), Positives = 34/63 (53%)
Frame = +3
Query: 510 GSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTARRRALQLYSTTHTTLEHSDCAFMVD 689
GSG +LL+ ++ +Y + +++ P+P+VS + H +E++D + +D
Sbjct: 40 GSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCID 99
Query: 690 NEA 698
NEA
Sbjct: 100 NEA 102
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 50.4 bits (115), Expect = 5e-08
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWE 142
MRECISVHVGQAGVQIGN CW+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
Score = 35.9 bits (79), Expect = 0.001
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 132 PAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAARTPC 269
P T WS AS+ RCP+TR S E +++ + + P LA + C
Sbjct: 19 PCWDCTVWSMASNRTVRCPRTRRS--EAVMTRSTPSSPRLAQASTC 62
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 29.5 bits (63), Expect(2) = 0.011
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 183 CPQTRPSGVETILSTLSSARPELAARTPCCLR 278
C RPS ++ ++ S RP+LAA + C R
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAANSATCWR 195
Score = 21.8 bits (44), Expect(2) = 0.011
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 126 VMPAGSFTAWSTASSLMARCPQTRPSGV 209
V+ AG F AW TA +T+P G+
Sbjct: 116 VLLAGDFNAWHTAWG----SERTKPKGI 139
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 27.9 bits (59), Expect = 0.33
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +1
Query: 547 PLTTARSLNWSSPSTPRLRFPLPVVEPYNSILPPTQPLSTLTV 675
P TT + W+ P T P P S LPP P +T TV
Sbjct: 180 PPTTTTTTVWTDP-TATTTTPAPTTTTTWSDLPPPPPTTTTTV 221
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 27.9 bits (59), Expect = 0.33
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +1
Query: 547 PLTTARSLNWSSPSTPRLRFPLPVVEPYNSILPPTQPLSTLTV 675
P TT + W+ P T P P S LPP P +T TV
Sbjct: 180 PPTTTTTTVWTDP-TATTTTPAPTTTTTWSDLPPPPPTTTTTV 221
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 27.1 bits (57), Expect = 0.57
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 538 SVSPLTTARSLNWSSPSTPRLRFPLPVVEPYNSILPPTQPLS 663
SVSP+ + + PS LR P P +P S+ P ++ LS
Sbjct: 360 SVSPVPSLPVRSSPEPSPVLLRSPTPAKKPLISVAPASKLLS 401
>CR954257-8|CAJ14159.1| 562|Anopheles gambiae putative esterase
protein.
Length = 562
Score = 24.6 bits (51), Expect = 3.0
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 481 LIFHSFGGGTALGSLPY*WSVSPLTTARSLNWSSPSTPRLRF 606
L+ S+ G +PY WSV+ LT + L + T RF
Sbjct: 446 LMLGSWPGAMHADDIPYLWSVTDLTISPILPTNHARTVSNRF 487
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 815,433
Number of Sequences: 2352
Number of extensions: 17620
Number of successful extensions: 37
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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