Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0907
(637 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 173 1e-43
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 173 1e-43
SB_56| Best HMM Match : Actin (HMM E-Value=0) 173 1e-43
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 173 1e-43
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 173 1e-43
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 2e-31
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 5e-21
SB_54| Best HMM Match : Actin (HMM E-Value=0) 91 9e-19
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 75 5e-14
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 66 3e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 55 4e-08
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 49 3e-06
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 2e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 34 0.084
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_34718| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 32 0.45
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.59
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.59
SB_40551| Best HMM Match : Extensin_2 (HMM E-Value=0.076) 31 0.78
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 31 1.0
SB_23338| Best HMM Match : Homeobox (HMM E-Value=3.1e-26) 31 1.0
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 1.4
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_35006| Best HMM Match : PT (HMM E-Value=3.4) 30 1.8
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 30 1.8
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 30 1.8
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 30 1.8
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 30 1.8
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 2.4
SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94) 29 4.2
SB_41992| Best HMM Match : efhand (HMM E-Value=2.4e-10) 29 4.2
SB_1252| Best HMM Match : POPLD (HMM E-Value=1.9) 29 4.2
SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59) 28 5.5
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_58507| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_18985| Best HMM Match : TUDOR (HMM E-Value=8.3e-37) 28 5.5
SB_6408| Best HMM Match : Keratin_B2 (HMM E-Value=2.5) 28 7.3
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 28 7.3
SB_59689| Best HMM Match : Pkinase (HMM E-Value=0.007) 27 9.7
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 27 9.7
SB_50302| Best HMM Match : DUF963 (HMM E-Value=0.96) 27 9.7
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_18286| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 27 9.7
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 27 9.7
SB_20049| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-05) 27 9.7
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 27 9.7
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 27 9.7
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 27 9.7
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 27 9.7
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 173 bits (420), Expect = 1e-43
Identities = 78/80 (97%), Positives = 79/80 (98%)
Frame = +2
Query: 254 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMF 433
LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 434 ETFNTPAMYVAIQAVLSLYA 493
ETFN+PAMYVAIQAVLSLYA
Sbjct: 126 ETFNSPAMYVAIQAVLSLYA 145
Score = 134 bits (324), Expect = 6e-32
Identities = 62/65 (95%), Positives = 64/65 (98%)
Frame = +3
Query: 60 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGI 254
SKRGI
Sbjct: 61 SKRGI 65
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPHAI 587
GIV+DS DGV HTVPIY+GYALPHAI
Sbjct: 151 GIVMDSGDGVTHTVPIYEGYALPHAI 176
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 173 bits (420), Expect = 1e-43
Identities = 78/80 (97%), Positives = 79/80 (98%)
Frame = +2
Query: 254 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMF 433
LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMF
Sbjct: 65 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 124
Query: 434 ETFNTPAMYVAIQAVLSLYA 493
ETFN+PAMYVAIQAVLSLYA
Sbjct: 125 ETFNSPAMYVAIQAVLSLYA 144
Score = 131 bits (317), Expect = 4e-31
Identities = 60/63 (95%), Positives = 63/63 (100%)
Frame = +3
Query: 66 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 245
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 246 RGI 254
RGI
Sbjct: 62 RGI 64
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPHAI 587
GIV+DS DGV HTVPIY+GYALPHAI
Sbjct: 150 GIVMDSGDGVTHTVPIYEGYALPHAI 175
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 173 bits (420), Expect = 1e-43
Identities = 78/80 (97%), Positives = 79/80 (98%)
Frame = +2
Query: 254 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMF 433
LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMF
Sbjct: 65 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 124
Query: 434 ETFNTPAMYVAIQAVLSLYA 493
ETFN+PAMYVAIQAVLSLYA
Sbjct: 125 ETFNSPAMYVAIQAVLSLYA 144
Score = 132 bits (320), Expect = 2e-31
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +3
Query: 66 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 245
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 246 RGI 254
RGI
Sbjct: 62 RGI 64
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPHAI 587
GIV+DS DGV HTVPIY+GYALPHAI
Sbjct: 150 GIVMDSGDGVTHTVPIYEGYALPHAI 175
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 173 bits (420), Expect = 1e-43
Identities = 78/80 (97%), Positives = 79/80 (98%)
Frame = +2
Query: 254 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMF 433
LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 434 ETFNTPAMYVAIQAVLSLYA 493
ETFN+PAMYVAIQAVLSLYA
Sbjct: 126 ETFNSPAMYVAIQAVLSLYA 145
Score = 138 bits (335), Expect = 3e-33
Identities = 63/65 (96%), Positives = 65/65 (100%)
Frame = +3
Query: 60 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGI 254
SKRGI
Sbjct: 61 SKRGI 65
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPHAI 587
GIV+DS DGV HTVPIY+GYALPHAI
Sbjct: 151 GIVMDSGDGVTHTVPIYEGYALPHAI 176
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 173 bits (420), Expect = 1e-43
Identities = 78/80 (97%), Positives = 79/80 (98%)
Frame = +2
Query: 254 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMF 433
LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMF
Sbjct: 66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 125
Query: 434 ETFNTPAMYVAIQAVLSLYA 493
ETFN+PAMYVAIQAVLSLYA
Sbjct: 126 ETFNSPAMYVAIQAVLSLYA 145
Score = 134 bits (324), Expect = 6e-32
Identities = 60/65 (92%), Positives = 64/65 (98%)
Frame = +3
Query: 60 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 239
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 240 SKRGI 254
SKRGI
Sbjct: 61 SKRGI 65
Score = 35.1 bits (77), Expect = 0.048
Identities = 16/23 (69%), Positives = 19/23 (82%), Gaps = 2/23 (8%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQ--GYA 572
GIV+DS DGV HTVPIY+ GY+
Sbjct: 151 GIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 132 bits (320), Expect = 2e-31
Identities = 60/63 (95%), Positives = 63/63 (100%)
Frame = +3
Query: 66 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 245
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 246 RGI 254
RGI
Sbjct: 62 RGI 64
Score = 54.4 bits (125), Expect = 7e-08
Identities = 23/26 (88%), Positives = 23/26 (88%)
Frame = +2
Query: 254 LTLKYPIEHGIVTNWDDMEKIWHHTF 331
LTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 65 LTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPHAI 587
GIV+DS DGV HTVPIY+GYALPHAI
Sbjct: 113 GIVMDSGDGVTHTVPIYEGYALPHAI 138
Score = 50.8 bits (116), Expect = 9e-07
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +2
Query: 404 NREKMTHIMFETFNTPAMYVAIQAVLSLYA 493
N + M IMFETFN+PAMYVAIQAVLSLYA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYA 107
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 98.3 bits (234), Expect = 5e-21
Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Frame = +2
Query: 242 QKRY-LTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREK 415
Q RY L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREK
Sbjct: 63 QLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREK 122
Query: 416 MTHIMFETFNTPAMYVAIQAVLSLYA 493
M +MFE + +Y+AIQAVL+LYA
Sbjct: 123 MIEVMFENYQFEGVYIAIQAVLTLYA 148
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +3
Query: 78 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKR 248
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLR 65
Score = 42.3 bits (95), Expect = 3e-04
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPH 581
G+V+DS DGV H P+Y+G+ALPH
Sbjct: 154 GVVIDSGDGVTHICPVYEGFALPH 177
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 90.6 bits (215), Expect = 9e-19
Identities = 40/61 (65%), Positives = 50/61 (81%)
Frame = +2
Query: 311 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLY 490
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M +MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 491 A 493
A
Sbjct: 2189 A 2189
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 84 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 185
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPHA 584
G V D DGV HTVP+Y GY LPHA
Sbjct: 2195 GTVFDCGDGVSHTVPVYDGYWLPHA 2219
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 74.9 bits (176), Expect = 5e-14
Identities = 31/45 (68%), Positives = 39/45 (86%)
Frame = +2
Query: 359 EHPVLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYA 493
+HPVLLTEAPLNP+ NREK + FETFN PA+++++QAVLSLYA
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYA 170
Score = 46.4 bits (105), Expect = 2e-05
Identities = 17/26 (65%), Positives = 24/26 (92%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPHAI 587
G+VLD+ DGV H+VPIY+G+A+PH+I
Sbjct: 176 GVVLDAGDGVSHSVPIYEGFAMPHSI 201
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 65.7 bits (153), Expect = 3e-11
Identities = 27/75 (36%), Positives = 47/75 (62%)
Frame = +2
Query: 269 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFNT 448
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T +MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 449 PAMYVAIQAVLSLYA 493
PA ++ +VL+ +A
Sbjct: 63 PAFFLCKNSVLTAFA 77
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 69 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 185
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Frame = +3
Query: 54 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 224
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 225 GDEAQSKRGI 254
GD A +K G+
Sbjct: 753 GDAAVAKSGV 762
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPHAI 587
G+V DS DGV H VPIY+GYALPHAI
Sbjct: 29 GVVFDSGDGVSHNVPIYEGYALPHAI 54
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +2
Query: 425 IMFETFNTPAMYVAIQAVLSLYA 493
IMFE FN+PA+YVAIQAVLSLYA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYA 23
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +2
Query: 239 EQKRYLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 376
++ Y T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 292 DKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 480 SRCTPFRSYHGIVLDSRDGVCHTVPI 557
SR R+ G V+DS DGV H +P+
Sbjct: 347 SRQVGERTLTGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 182 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 66
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 34.3 bits (75), Expect = 0.084
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 480 SRCTPFRSYHGIVLDSRDGVCHTVPIYQGYALPHAI 587
SR R+ G V+DS DGV H +P+ +GY + I
Sbjct: 53 SRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCI 88
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.9 bits (69), Expect = 0.45
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +2
Query: 185 GRDGRYGTEGLLCRR*-GTEQKRYLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 355
GR G + GL G+ + L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 356 EEHPVLLTEAPLNPKANRE 412
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_34718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 31.9 bits (69), Expect = 0.45
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 505 TTVSCWTPATVSATPCPSTKDTHSPTPSCVWT*PVATSQTTS 630
+T+S +P T ++ P + +T P+PS T P AT+ T S
Sbjct: 6 STLSAGSPVTAPSSTRPPSPNTRPPSPSTTATLPSATNSTQS 47
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 31.9 bits (69), Expect = 0.45
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 239 EQKRYLTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 340
E K Y L Y P + G + NWD ++IW +TF E
Sbjct: 280 ECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 72 EVAALVVDNGSGMCKAGFAGDDAPRAV 152
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 157 GNTARGASSPAKPALHIPEPLSTT 86
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.59
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 157 GNTARGASSPAKPALHIPEPLSTT 86
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_40551| Best HMM Match : Extensin_2 (HMM E-Value=0.076)
Length = 1269
Score = 31.1 bits (67), Expect = 0.78
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 494 VPVVPRYRAGLPRRCLPHRAHLPRIRTPPRHPASGL 601
V +VPR + +P + PH + PR+ P HP G+
Sbjct: 653 VAMVPRPQVMVPVQAQPHFSMAPRVAAQPPHPPPGV 688
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = -2
Query: 363 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMG--YLRVRYLFCSVPHLLHKSPSVPYRPS 190
CS + + C + ++V CS Y+ V + CS + H+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 189 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 97
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_23338| Best HMM Match : Homeobox (HMM E-Value=3.1e-26)
Length = 275
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 497 PVVPRYRAGLPRRCLPHRAHLPRIRTPPRHP 589
PV PRY+A P L + LP++ PP P
Sbjct: 188 PVYPRYQAASPLTYLGYSPELPQLHRPPLPP 218
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 157 GNTARGASSPAKPALHIPEPLSTT 86
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 239 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 105
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 216 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 239 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 105
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 411 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_35006| Best HMM Match : PT (HMM E-Value=3.4)
Length = 325
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = -1
Query: 277 FDGVFEGQIPLLLCASSPT*ESFCPIPTITP*WRGLPT 164
+DGV + ++ LLL +SSP S PI TP +GL T
Sbjct: 273 YDGVIDIKLNLLLLSSSPMFLSAVPIAPHTPTLQGLHT 310
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 29.9 bits (64), Expect = 1.8
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = -3
Query: 245 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 81
FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 80 GNFFVAHLELVK 45
G V L+ K
Sbjct: 521 GQVDVLLLDFQK 532
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 239 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 105
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 274 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 239 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 105
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 252 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 239 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 105
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 239 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 105
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 239 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 105
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 128 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 385 SPQPQGQQREDDPYHVRNIQHARHVRRHPSR 477
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 239 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 105
+C ++LSH + H M D +HG RS SCET L T
Sbjct: 176 ICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94)
Length = 450
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 494 VPVVPRYRAGLPRRCLPHRAHLPRIRTPPRHPASGLNRSR-PHRLP 628
VPV PR R+ PRR +P R +P R P S RS P R+P
Sbjct: 273 VPVSPRQRSNSPRR-VPVSPR-QRSNSPRRVPVSPRQRSNSPRRVP 316
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +2
Query: 494 VPVVPRYRAGLPRRCLPHRAHLPRIRTPPRHPASGLNRSRP 616
VPV PR R LPRR +P + + +P R P S +SRP
Sbjct: 315 VPVSPRQRPNLPRR-VPLSSR-QQSNSPRRVPLSPRQQSRP 353
>SB_41992| Best HMM Match : efhand (HMM E-Value=2.4e-10)
Length = 1303
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = +3
Query: 438 HSTRPPCTSPSKPCSRCTPFRSYHGIVLDSRDGVCHTVPIYQG 566
HST PC S C R PFR + RDG C VP G
Sbjct: 1157 HSTPSPCRDGS--C-RDAPFRDGASHDVACRDGSCRDVPFRDG 1196
>SB_1252| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 566
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +3
Query: 438 HSTRPPCTSPSKPCSRCTPFRSYHGIVLDSRDGVCHTVP 554
HS RPP P RC ++ HG V DG+ VP
Sbjct: 129 HSKRPPPRRWKAPLQRCRMPQTQHGAVDRLHDGLGCVVP 167
>SB_40833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 438 HSTRPPCTSPSKPCSRCTPFRSYHGIVLDSRDGVCHT 548
H T C+S C+ C P G+VL + GVC +
Sbjct: 920 HPTCASCSSSGPKCTSCIP-----GLVLSEKGGVCES 951
>SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)
Length = 764
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 418 DPYHV-RNIQHARHVRRHPSRALAVRR 495
DP HV R +RHVRR PS + VRR
Sbjct: 224 DPRHVKRKTLDSRHVRRKPSDSRHVRR 250
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 157 GNTARGASSPAKPALHIPEPLSTT 86
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 157 GNTARGASSPAKPALHIPEPLSTT 86
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_58507| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2353
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 397 QGQQREDDPYHVRNIQHARHVRRHPSRALAVRRSGRTTVSCWTPATVSATPCPSTKDTH- 573
QG+Q+ + P + +Q RH + P + ++ G T +C ++ PS + H
Sbjct: 1105 QGRQKMESPRTAQPLQVIRHTKTSPDK----QKHGTNTATCVNGDIHQSSHAPSVNNKHR 1160
Query: 574 SPTP 585
P P
Sbjct: 1161 RPKP 1164
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 423 ISCSKHSTRPPCTSPSKPCSRCTP 494
+ CS+HS +P C PSK C + P
Sbjct: 1519 VGCSEHSCKPEC--PSKCCMKVLP 1540
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 535 VSATPCPSTKDTHSPTPSCVWT*PVAT 615
VS+TP + + H PTP C PV T
Sbjct: 10 VSSTPSQMSAERHEPTPQCRLKFPVQT 36
>SB_18985| Best HMM Match : TUDOR (HMM E-Value=8.3e-37)
Length = 1219
Score = 28.3 bits (60), Expect = 5.5
Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -2
Query: 615 GRDRLSPDAGWRGGVRILGRWARC-GRHRRGSPARYRGTTGTAYSESTA 472
G RLS DA RGG R L ARC G R AR RG G+ + A
Sbjct: 931 GGKRLSCDARCRGGKR-LSCDARCRGGKRLSCDARCRGKQGSVLRATPA 978
>SB_6408| Best HMM Match : Keratin_B2 (HMM E-Value=2.5)
Length = 280
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +3
Query: 423 ISCSKHSTRPPCTSPSKP--CSRCTP---FRSYHGIVLDSRDGVCHTVPIYQG 566
+ CS + PPCT+ S+ + C P ++ ++LD C T +Y G
Sbjct: 111 VCCSDYGQLPPCTAKSRTVHATACPPGSTIQTARRLILDHSLECCITNAVYTG 163
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 505 TTVSCWTPATVSATPCPSTKDTHSPTPSCVWT*PVATSQTTS 630
T + +TP T S TP PS T S TP+ +T + + TTS
Sbjct: 63 TPTTSYTPTT-SYTPTPSYTPTTSYTPTPSYTSTTSYTPTTS 103
>SB_59689| Best HMM Match : Pkinase (HMM E-Value=0.007)
Length = 881
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = -2
Query: 516 RYRGTTGTAYSESTAWMATYMAGVLNVSN--MIWVIFSLLALGL 391
RYRGT G Y +TAW ++ VS+ ++ VIF ++A+G+
Sbjct: 467 RYRGT-GDVY-HATAWEFRQSPRIILVSSATIVVVIFIIIAIGI 508
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 239 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 105
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 245 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_50302| Best HMM Match : DUF963 (HMM E-Value=0.96)
Length = 427
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = -1
Query: 541 QTPSRESSTIPWYDRNGVQREHGLDGDVHGGRVEC 437
Q P + WY G E G G GGR+ C
Sbjct: 340 QRPLTQQEYFAWYISGGSVPERGRTGSQKGGRILC 374
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 172 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 62
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_18286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 463 RHPSRALAVRRSGRTTVSCWTPATVSATPCPSTKDTHSPTPSC 591
+HPS +SG +VS P A C T T+S +P C
Sbjct: 872 KHPSPC-PYAKSGPYSVSTTPPVQKQAPMCTGTNTTNSVSPVC 913
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 239 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 105
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 106 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 239 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 105
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 1644 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 239 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 105
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 672 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 239 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 105
LC + ++LSH + H L +HG R +SCET L T
Sbjct: 857 LCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 228 LLHKSPSVPYRPS--RPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPT 82
LL +S P +P+ RP GGA P++ ++ + N+ T+ PT
Sbjct: 92 LLDESTEAPPQPATIRPQGGALPQTPVKGKQNKRVSDNKEFTHAMQARRPT 142
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -2
Query: 234 PHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLLRR 64
P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 239 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 105
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 227 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_20049| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-05)
Length = 1023
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = -2
Query: 612 RDRLSPDAGWRGGVRILGRWARCGRHRRGSPARYRGTTGTAYS 484
R LSP AG + I GR GRH P R R ++ +S
Sbjct: 308 RRALSPPAGSAAAIAIPGRPNSPGRHSTHDPVRTRLSSSLDFS 350
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 239 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 105
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 1082 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 469 PSRALAVRRSG-RTTVSCWTPATVSATPCPSTKDTHSPTP 585
PSR ++++ S + S + T++ P P + DT SPTP
Sbjct: 307 PSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 239 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 105
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 25 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 239 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 105
+C ++LSH + H L A +HG R +SCET L T
Sbjct: 106 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,496,679
Number of Sequences: 59808
Number of extensions: 588131
Number of successful extensions: 2374
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 1958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2357
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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