Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0907
(637 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 173 1e-43
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 172 1e-43
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 172 1e-43
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 171 4e-43
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 170 6e-43
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 170 6e-43
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 170 6e-43
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 170 8e-43
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 170 8e-43
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 153 7e-38
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 149 2e-36
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 149 2e-36
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 110 9e-25
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 95 5e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 81 5e-16
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 68 6e-12
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 62 3e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 56 3e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 48 5e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.091
At1g16690.2 68414.m01999 transcription factor-related similar to... 33 0.16
At1g16690.1 68414.m01998 transcription factor-related similar to... 33 0.16
At5g45590.1 68418.m05601 expressed protein 30 1.5
At2g41940.1 68415.m05188 zinc finger (C2H2 type) family protein ... 30 1.5
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 28 4.5
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 28 4.5
At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C... 28 4.5
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 173 bits (420), Expect = 1e-43
Identities = 78/80 (97%), Positives = 79/80 (98%)
Frame = +2
Query: 254 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMF 433
LTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMF
Sbjct: 67 LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 434 ETFNTPAMYVAIQAVLSLYA 493
ETFNTPAMYVAIQAVLSLYA
Sbjct: 127 ETFNTPAMYVAIQAVLSLYA 146
Score = 116 bits (280), Expect = 1e-26
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +3
Query: 69 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 248
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 249 GI 254
GI
Sbjct: 65 GI 66
Score = 53.2 bits (122), Expect = 1e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPHAI 587
GIVLDS DGV HTVPIY+GYALPHAI
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAI 177
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 172 bits (419), Expect = 1e-43
Identities = 78/80 (97%), Positives = 78/80 (97%)
Frame = +2
Query: 254 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMF 433
LTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMF
Sbjct: 67 LTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 434 ETFNTPAMYVAIQAVLSLYA 493
ETFNTPAMYVAIQAVLSLYA
Sbjct: 127 ETFNTPAMYVAIQAVLSLYA 146
Score = 116 bits (280), Expect = 1e-26
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +3
Query: 69 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 248
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 249 GI 254
GI
Sbjct: 65 GI 66
Score = 53.2 bits (122), Expect = 1e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPHAI 587
GIVLDS DGV HTVPIY+GYALPHAI
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAI 177
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 172 bits (419), Expect = 1e-43
Identities = 78/80 (97%), Positives = 78/80 (97%)
Frame = +2
Query: 254 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMF 433
LTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMF
Sbjct: 67 LTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 434 ETFNTPAMYVAIQAVLSLYA 493
ETFNTPAMYVAIQAVLSLYA
Sbjct: 127 ETFNTPAMYVAIQAVLSLYA 146
Score = 116 bits (280), Expect = 1e-26
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +3
Query: 69 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 248
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 249 GI 254
GI
Sbjct: 65 GI 66
Score = 53.2 bits (122), Expect = 1e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPHAI 587
GIVLDS DGV HTVPIY+GYALPHAI
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAI 177
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 171 bits (415), Expect = 4e-43
Identities = 77/80 (96%), Positives = 78/80 (97%)
Frame = +2
Query: 254 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMF 433
LTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT IMF
Sbjct: 67 LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 434 ETFNTPAMYVAIQAVLSLYA 493
ETFN PAMYVAIQAVLSLYA
Sbjct: 127 ETFNVPAMYVAIQAVLSLYA 146
Score = 116 bits (280), Expect = 1e-26
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +3
Query: 69 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 248
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 249 GI 254
GI
Sbjct: 65 GI 66
Score = 53.2 bits (122), Expect = 1e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPHAI 587
GIVLDS DGV HTVPIY+GYALPHAI
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAI 177
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 170 bits (414), Expect = 6e-43
Identities = 75/80 (93%), Positives = 79/80 (98%)
Frame = +2
Query: 254 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMF 433
LTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT IMF
Sbjct: 67 LTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 434 ETFNTPAMYVAIQAVLSLYA 493
ETFN+PAMYVAIQAVLSLYA
Sbjct: 127 ETFNSPAMYVAIQAVLSLYA 146
Score = 112 bits (269), Expect = 2e-25
Identities = 49/62 (79%), Positives = 56/62 (90%)
Frame = +3
Query: 69 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 248
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 249 GI 254
GI
Sbjct: 65 GI 66
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPHAI 587
GIVLDS DGV HTVPIY+G++LPHAI
Sbjct: 152 GIVLDSGDGVSHTVPIYEGFSLPHAI 177
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 170 bits (414), Expect = 6e-43
Identities = 75/80 (93%), Positives = 79/80 (98%)
Frame = +2
Query: 254 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMF 433
LTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT IMF
Sbjct: 67 LTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 434 ETFNTPAMYVAIQAVLSLYA 493
ETFN+PAMYVAIQAVLSLYA
Sbjct: 127 ETFNSPAMYVAIQAVLSLYA 146
Score = 112 bits (269), Expect = 2e-25
Identities = 49/62 (79%), Positives = 56/62 (90%)
Frame = +3
Query: 69 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 248
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 249 GI 254
GI
Sbjct: 65 GI 66
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPHAI 587
GIVLDS DGV HTVPIY+G++LPHAI
Sbjct: 152 GIVLDSGDGVSHTVPIYEGFSLPHAI 177
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 170 bits (414), Expect = 6e-43
Identities = 75/80 (93%), Positives = 79/80 (98%)
Frame = +2
Query: 254 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMF 433
LTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT IMF
Sbjct: 67 LTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 434 ETFNTPAMYVAIQAVLSLYA 493
ETFN+PAMYVAIQAVLSLYA
Sbjct: 127 ETFNSPAMYVAIQAVLSLYA 146
Score = 112 bits (269), Expect = 2e-25
Identities = 49/62 (79%), Positives = 56/62 (90%)
Frame = +3
Query: 69 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 248
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 249 GI 254
GI
Sbjct: 65 GI 66
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPHAI 587
GIVLDS DGV HTVPIY+G++LPHAI
Sbjct: 152 GIVLDSGDGVSHTVPIYEGFSLPHAI 177
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 170 bits (413), Expect = 8e-43
Identities = 76/80 (95%), Positives = 77/80 (96%)
Frame = +2
Query: 254 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMF 433
LTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT IMF
Sbjct: 67 LTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMF 126
Query: 434 ETFNTPAMYVAIQAVLSLYA 493
ETFN PAMYVAIQAVLSLYA
Sbjct: 127 ETFNAPAMYVAIQAVLSLYA 146
Score = 116 bits (280), Expect = 1e-26
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +3
Query: 69 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 248
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 249 GI 254
GI
Sbjct: 65 GI 66
Score = 53.2 bits (122), Expect = 1e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPHAI 587
GIVLDS DGV HTVPIY+GYALPHAI
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAI 177
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 170 bits (413), Expect = 8e-43
Identities = 76/80 (95%), Positives = 77/80 (96%)
Frame = +2
Query: 254 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMF 433
LTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT IMF
Sbjct: 67 LTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMF 126
Query: 434 ETFNTPAMYVAIQAVLSLYA 493
ETFN PAMYVAIQAVLSLYA
Sbjct: 127 ETFNAPAMYVAIQAVLSLYA 146
Score = 116 bits (280), Expect = 1e-26
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +3
Query: 69 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 248
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 249 GI 254
GI
Sbjct: 65 GI 66
Score = 53.2 bits (122), Expect = 1e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPHAI 587
GIVLDS DGV HTVPIY+GYALPHAI
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAI 177
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 153 bits (372), Expect = 7e-38
Identities = 65/80 (81%), Positives = 74/80 (92%)
Frame = +2
Query: 254 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMF 433
L+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMT IMF
Sbjct: 68 LSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQIMF 127
Query: 434 ETFNTPAMYVAIQAVLSLYA 493
E+F P+MY+ IQAVLSLY+
Sbjct: 128 ESFAFPSMYIGIQAVLSLYS 147
Score = 108 bits (260), Expect = 3e-24
Identities = 47/62 (75%), Positives = 57/62 (91%)
Frame = +3
Query: 69 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 248
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 249 GI 254
GI
Sbjct: 66 GI 67
Score = 53.2 bits (122), Expect = 1e-07
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPHAI 587
GIVLDS DGV HTVPIY+GYALPHAI
Sbjct: 153 GIVLDSGDGVSHTVPIYEGYALPHAI 178
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 149 bits (361), Expect = 2e-36
Identities = 64/80 (80%), Positives = 74/80 (92%)
Frame = +2
Query: 254 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMF 433
LTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMT IMF
Sbjct: 22 LTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMTQIMF 81
Query: 434 ETFNTPAMYVAIQAVLSLYA 493
ETF P+MY+ +QA LSL+A
Sbjct: 82 ETFAVPSMYIGMQAALSLHA 101
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPHAI 587
G VLDS DGV + VPIY+G ALPHAI
Sbjct: 107 GTVLDSGDGVSYIVPIYEGSALPHAI 132
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 192 MVGMGQKDSYVGDEAQSKRGI 254
MVGM + D +VGD+A+++ GI
Sbjct: 1 MVGMNENDLFVGDDAEARSGI 21
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 149 bits (361), Expect = 2e-36
Identities = 70/102 (68%), Positives = 80/102 (78%)
Frame = +2
Query: 188 RDGRYGTEGLLCRR*GTEQKRYLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 367
RDG E + G + LTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 368 VLLTEAPLNPKANREKMTHIMFETFNTPAMYVAIQAVLSLYA 493
VLLTEAP NPKANREKMT IMFE+F+ PAMYV++Q+VL LY+
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYS 135
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/57 (50%), Positives = 38/57 (66%)
Frame = +3
Query: 84 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 254
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R I
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDI 55
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPHAI 587
G+VLD + V HTVP+Y+GYALPH I
Sbjct: 141 GVVLDLGERVSHTVPVYEGYALPHGI 166
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 110 bits (264), Expect = 9e-25
Identities = 45/86 (52%), Positives = 61/86 (70%)
Frame = +2
Query: 236 TEQKRYLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 415
+E + L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 416 MTHIMFETFNTPAMYVAIQAVLSLYA 493
M MFE +N +++ IQAVL+LYA
Sbjct: 120 MIETMFEKYNFAGVFIQIQAVLTLYA 145
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +3
Query: 84 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKR 248
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELR 63
Score = 39.1 bits (87), Expect = 0.002
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPH 581
G+V+DS DGV H VP+ GY+ PH
Sbjct: 151 GLVIDSGDGVTHVVPVVDGYSFPH 174
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 94.7 bits (225), Expect = 5e-20
Identities = 41/78 (52%), Positives = 53/78 (67%)
Frame = +2
Query: 260 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFET 439
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 440 FNTPAMYVAIQAVLSLYA 493
FN P +Y+A+ +VL+L A
Sbjct: 146 FNVPGLYIAVNSVLALAA 163
Score = 35.9 bits (79), Expect = 0.023
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 81 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 167
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 510 GIVLDSRDGVCHTVPIYQGYALPHAI 587
G+V+D DG H VP+ +GY + I
Sbjct: 174 GVVVDVGDGATHVVPVAEGYVIGSCI 199
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 81.4 bits (192), Expect = 5e-16
Identities = 34/84 (40%), Positives = 55/84 (65%)
Frame = +2
Query: 242 QKRYLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 421
++ ++ + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 422 HIMFETFNTPAMYVAIQAVLSLYA 493
+MFE + PA+++A VL+ +A
Sbjct: 145 ELMFEKYKVPALFMAKNPVLTSFA 168
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 69 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 170
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 67.7 bits (158), Expect = 6e-12
Identities = 34/77 (44%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +2
Query: 269 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTHIMFETFN 445
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ +MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 446 TPAMYVAIQAVLSLYAV 496
Y + QAVLSLYAV
Sbjct: 117 VSGFYASEQAVLSLYAV 133
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 81 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 173
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.1 bits (144), Expect = 3e-10
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +2
Query: 269 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 415
P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 88 PTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 58.4 bits (135), Expect = 4e-09
Identities = 27/61 (44%), Positives = 40/61 (65%)
Frame = +3
Query: 69 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 248
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ + + E+ ++
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 249 G 251
G
Sbjct: 65 G 65
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +2
Query: 260 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFET 439
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + ++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 440 FNTPAMYVA-IQAVLSLY 490
F ++Y+A Q+++ LY
Sbjct: 121 FGFSSLYIAHPQSLVHLY 138
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 84 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 176
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 48.0 bits (109), Expect = 5e-06
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 269 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFN 445
P + +V ++ ME I + F + +HP+L+TE NP +R KM ++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 446 TPAMYVAIQAVLS 484
PA+ + A S
Sbjct: 145 VPAVAFGVDAAFS 157
Score = 44.0 bits (99), Expect = 8e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +3
Query: 84 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 230
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.091
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 205 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 68
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 33.1 bits (72), Expect = 0.16
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +2
Query: 239 EQKRYLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 415
E +YL++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 173 EALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 33.1 bits (72), Expect = 0.16
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +2
Query: 239 EQKRYLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 415
E +YL++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 173 EALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g45590.1 68418.m05601 expressed protein
Length = 173
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -2
Query: 537 HRRGSPARYRGTTGTAYSESTAWMATYMAGVL--NVSNM 427
H SP+R+ TT ++ ST W AGV NVS+M
Sbjct: 31 HHSPSPSRHLTTTTLGFANSTKWSFVPAAGVFPSNVSSM 69
>At2g41940.1 68415.m05188 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 257
Score = 29.9 bits (64), Expect = 1.5
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +1
Query: 418 DPYHVRNIQHARHVRRHPSRALAVRR----SGRTTVSCWTPATVSATPCPSTKDTHSPTP 585
DP+H+ + H R +PS R G T S ++ T++ P S T + +P
Sbjct: 140 DPHHIYGFLNNHHHRHYPSWTTEARSYYGGGGHQTPSYYSRNTLA--PPSSNPPTINGSP 197
Query: 586 SCVWT*PVATSQTT 627
+W P +TS T
Sbjct: 198 LGLWRVPPSTSTNT 211
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 28.3 bits (60), Expect = 4.5
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 10/66 (15%)
Frame = +2
Query: 326 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTHIMFETF---NTPAMYVAIQA 475
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 476 VLSLYA 493
VL+LYA
Sbjct: 241 VLALYA 246
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 28.3 bits (60), Expect = 4.5
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 10/66 (15%)
Frame = +2
Query: 326 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTHIMFETF---NTPAMYVAIQA 475
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 476 VLSLYA 493
VL+LYA
Sbjct: 241 VLALYA 246
>At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C2H2
type) family protein identical to superman protein
GB:S60325 from [Arabidopsis thaliana]; contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 204
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 443 NTPAMYVAIQAVLSLYAVPVVPRYRAGLPRRCLPHRAHLP 562
N+P + + + + P PRYRAGL R P H P
Sbjct: 104 NSPPPHHSPLTLFPTLSPPSSPRYRAGLIRSLSPKSKHTP 143
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 181 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 59
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,816,779
Number of Sequences: 28952
Number of extensions: 378640
Number of successful extensions: 1262
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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