Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0906
         (348 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3E8Y2 Cluster: Uncharacterized protein At5g28270.1; n=...    31   4.1  
UniRef50_Q7SHF2 Cluster: Putative uncharacterized protein NCU029...    31   7.2  
UniRef50_UPI000023F6BC Cluster: hypothetical protein FG10633.1; ...    30   9.5  
UniRef50_A5C0F9 Cluster: Putative uncharacterized protein; n=1; ...    30   9.5  
UniRef50_Q7RID3 Cluster: Prespore-specific protein; n=2; Plasmod...    30   9.5  

>UniRef50_Q3E8Y2 Cluster: Uncharacterized protein At5g28270.1; n=1;
           Arabidopsis thaliana|Rep: Uncharacterized protein
           At5g28270.1 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 574

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 338 PHNTVFKLPKSSLFYVLYPWPRTALITTNDDCS 240
           P+    +L K+  F+  YPW RT+ + T D C+
Sbjct: 217 PNEMTVELTKNLNFFCKYPWRRTSFLLTLDRCT 249


>UniRef50_Q7SHF2 Cluster: Putative uncharacterized protein
           NCU02952.1; n=1; Neurospora crassa|Rep: Putative
           uncharacterized protein NCU02952.1 - Neurospora crassa
          Length = 528

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = +1

Query: 142 IRLIFGIKFDESQREFGRRPVIPPTRNRRRFLRLQSSFVVI 264
           +R +F  K + S  + GR PVI PT + R   ++++SF+ +
Sbjct: 7   LRAMFEQKGETSPPDRGRSPVISPTDSPRPLNKIKTSFIAV 47


>UniRef50_UPI000023F6BC Cluster: hypothetical protein FG10633.1; n=1;
            Gibberella zeae PH-1|Rep: hypothetical protein FG10633.1
            - Gibberella zeae PH-1
          Length = 1342

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +1

Query: 277  GHGYRT*NNELFGNLNTVL 333
            GHGYRT N  L G+ NTVL
Sbjct: 1310 GHGYRTKNGVLLGSRNTVL 1328


>UniRef50_A5C0F9 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 517

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 79  LEHVLLFNLVNKVIGNYYKNRIRLIFGIKFDESQREF 189
           L  + L N++ K+I     NR+++ F +  DESQ  F
Sbjct: 4   LRPIALCNVLYKIIAKVLANRLKVFFPVLIDESQLAF 40


>UniRef50_Q7RID3 Cluster: Prespore-specific protein; n=2; Plasmodium
           (Vinckeia)|Rep: Prespore-specific protein - Plasmodium
           yoelii yoelii
          Length = 680

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 70  YA*LEHVLLFNLVNKVIGNYYKNRIRLIFGIKFDESQREFGRRPV 204
           Y  LE +L F L+NK+  N   NRI +   IK      ++ + P+
Sbjct: 347 YLTLEKILEFELINKLTSNIINNRINVFTYIKRLNLDEKWAKLPI 391


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 284,595,789
Number of Sequences: 1657284
Number of extensions: 4186466
Number of successful extensions: 8115
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8113
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 11131607110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)