BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0903
(679 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF457552-1|AAL68782.1| 311|Anopheles gambiae D7 protein long fo... 24 3.8
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein. 23 6.7
>AF457552-1|AAL68782.1| 311|Anopheles gambiae D7 protein long form
protein.
Length = 311
Score = 24.2 bits (50), Expect = 3.8
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 323 FKPKYINLQHQDFSSFLKIVS 385
FKP+ + +QH+ + SF ++ S
Sbjct: 88 FKPETVPVQHEAYKSFTEVES 108
>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
Length = 1152
Score = 23.4 bits (48), Expect = 6.7
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +1
Query: 583 QMNVLTVSYSLNHQQNLNSISNHF 654
Q+ VL + + NH+Q+ + + +HF
Sbjct: 132 QVKVLWLKNNANHEQSASLVRHHF 155
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,300
Number of Sequences: 2352
Number of extensions: 13392
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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