Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0902
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 498  EICSQVVRSALNAVNERIGRV 560
            EIC+ V++     V +R GR+
Sbjct: 2106 EICTNVIKKGWKVVRDRRGRI 2126


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 299 FITYCNNIVNVWN 337
           F T+CN ++ +WN
Sbjct: 429 FFTFCNVLMEMWN 441


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -3

Query: 519  GLLGNRSPLYRAVLCNYNL*NKKN 448
            GL  + + L++ ++C Y   NK+N
Sbjct: 1076 GLEFSVNKLFKCMICTYKADNKEN 1099


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -3

Query: 519  GLLGNRSPLYRAVLCNYNL*NKKN 448
            GL  + + L++ ++C Y   NK+N
Sbjct: 1076 GLEFSVNKLFKCMICTYKADNKEN 1099


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 92   WIIFALFYF*LMIPSIFLVRRILSKINM 9
            W I     + L IPS++L+  + S IN+
Sbjct: 1027 WCIVPGIIYLLSIPSMYLLLILYSIINL 1054


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 92   WIIFALFYF*LMIPSIFLVRRILSKINM 9
            W I     + L IPS++L+  + S IN+
Sbjct: 1027 WCIVPGIIYLLSIPSMYLLLILYSIINL 1054


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 92   WIIFALFYF*LMIPSIFLVRRILSKINM 9
            W I     + L IPS++L+  + S IN+
Sbjct: 1027 WCIVPGIIYLLSIPSMYLLLILYSIINL 1054


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 92   WIIFALFYF*LMIPSIFLVRRILSKINM 9
            W I     + L IPS++L+  + S IN+
Sbjct: 1027 WCIVPGIIYLLSIPSMYLLLILYSIINL 1054


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,603
Number of Sequences: 336
Number of extensions: 3647
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)