BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0902 (701 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po... 27 2.6 SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|ch... 27 2.6 SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 27 3.4 SPCP1E11.03 |mug170||arrestin|Schizosaccharomyces pombe|chr 3|||... 26 6.0 SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 26 6.0 >SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces pombe|chr 3|||Manual Length = 472 Score = 27.1 bits (57), Expect = 2.6 Identities = 9/25 (36%), Positives = 17/25 (68%) Frame = +1 Query: 238 HWKLTCHCVHWASTHRAMYAIYNLL 312 H L C +W+ THRAM+ +++++ Sbjct: 152 HCVLRCCLSNWSWTHRAMFILHSMV 176 >SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 701 Score = 27.1 bits (57), Expect = 2.6 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = -3 Query: 375 ICLKHKNILSIMKFQTLTILLQ*VINSIHCAMCTRP 268 +CL H +I S+ FQT LL V+ H + C P Sbjct: 48 LCLSHPSINSLSSFQTYHQLLC-VLEQKHLSECVAP 82 >SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual Length = 1496 Score = 26.6 bits (56), Expect = 3.4 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -2 Query: 622 IRLEW*CRRGKRCHSYVCTNITRPI 548 IR W R+GK+CHS + T+PI Sbjct: 162 IRCIW--RKGKKCHSAYISERTKPI 184 >SPCP1E11.03 |mug170||arrestin|Schizosaccharomyces pombe|chr 3|||Manual Length = 426 Score = 25.8 bits (54), Expect = 6.0 Identities = 11/38 (28%), Positives = 20/38 (52%) Frame = -3 Query: 363 HKNILSIMKFQTLTILLQ*VINSIHCAMCTRPMNAMTS 250 H + L ++ + + T+ L + +I C CT P +TS Sbjct: 205 HSSKLELLYYISSTLTLTSLDQNIRCTRCTIPKRVITS 242 >SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 882 Score = 25.8 bits (54), Expect = 6.0 Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%) Frame = +3 Query: 423 PPRSILE-VCSFCFTSYNCTTRPYK 494 PPR+ LE +CS C T N T P + Sbjct: 467 PPRASLETLCSLCVTLINDTFEPVR 491 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,807,151 Number of Sequences: 5004 Number of extensions: 57165 Number of successful extensions: 115 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 110 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 115 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 325165428 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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