Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0902
         (701 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029287-1|ABK30924.1|  587|Drosophila melanogaster RT01119p pro...    29   4.6  
AE014297-842|AAF54310.1|  587|Drosophila melanogaster CG11966-PA...    29   4.6  
AY122267-1|AAM52779.1|  205|Drosophila melanogaster SD20015p pro...    29   6.1  
AE014134-1872|AAS64676.1|  205|Drosophila melanogaster CG33677-P...    29   6.1  

>BT029287-1|ABK30924.1|  587|Drosophila melanogaster RT01119p
           protein.
          Length = 587

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 17/65 (26%), Positives = 29/65 (44%)
 Frame = -3

Query: 519 GLLGNRSPLYRAVLCNYNL*NKKNRPQV*SEEVYLSIGKSKLPFNYNIICLKHKNILSIM 340
           GLLG   P++R  +CN    NK N       +V+L     + PF  ++     +    ++
Sbjct: 522 GLLGKEKPVHRCSICNRGFLNKSN------IKVHLRTHTGEKPFRCDVCAKAFRQKAHLL 575

Query: 339 KFQTL 325
           K Q +
Sbjct: 576 KHQQM 580


>AE014297-842|AAF54310.1|  587|Drosophila melanogaster CG11966-PA
           protein.
          Length = 587

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 17/65 (26%), Positives = 29/65 (44%)
 Frame = -3

Query: 519 GLLGNRSPLYRAVLCNYNL*NKKNRPQV*SEEVYLSIGKSKLPFNYNIICLKHKNILSIM 340
           GLLG   P++R  +CN    NK N       +V+L     + PF  ++     +    ++
Sbjct: 522 GLLGKEKPVHRCSICNRGFLNKSN------IKVHLRTHTGEKPFRCDVCAKAFRQKAHLL 575

Query: 339 KFQTL 325
           K Q +
Sbjct: 576 KHQQI 580


>AY122267-1|AAM52779.1|  205|Drosophila melanogaster SD20015p
           protein.
          Length = 205

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 13/42 (30%), Positives = 26/42 (61%)
 Frame = +2

Query: 8   TYLFYSKYVSLRIY*VSLIKNKIMQKLSMSNINIVENYVDDL 133
           T +F +  + LR Y   ++K+  ++K  M ++N+ E YV+D+
Sbjct: 72  TMVFLTMQIFLR-YPKGVVKHHELRKCLMDDLNLTEEYVEDI 112


>AE014134-1872|AAS64676.1|  205|Drosophila melanogaster CG33677-PB,
           isoform B protein.
          Length = 205

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 13/42 (30%), Positives = 26/42 (61%)
 Frame = +2

Query: 8   TYLFYSKYVSLRIY*VSLIKNKIMQKLSMSNINIVENYVDDL 133
           T +F +  + LR Y   ++K+  ++K  M ++N+ E YV+D+
Sbjct: 72  TMVFLTMQIFLR-YPKGVVKHHELRKCLMDDLNLTEEYVEDI 112


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,035,833
Number of Sequences: 53049
Number of extensions: 589324
Number of successful extensions: 1241
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)