BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0902 (701 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT029287-1|ABK30924.1| 587|Drosophila melanogaster RT01119p pro... 29 4.6 AE014297-842|AAF54310.1| 587|Drosophila melanogaster CG11966-PA... 29 4.6 AY122267-1|AAM52779.1| 205|Drosophila melanogaster SD20015p pro... 29 6.1 AE014134-1872|AAS64676.1| 205|Drosophila melanogaster CG33677-P... 29 6.1 >BT029287-1|ABK30924.1| 587|Drosophila melanogaster RT01119p protein. Length = 587 Score = 29.5 bits (63), Expect = 4.6 Identities = 17/65 (26%), Positives = 29/65 (44%) Frame = -3 Query: 519 GLLGNRSPLYRAVLCNYNL*NKKNRPQV*SEEVYLSIGKSKLPFNYNIICLKHKNILSIM 340 GLLG P++R +CN NK N +V+L + PF ++ + ++ Sbjct: 522 GLLGKEKPVHRCSICNRGFLNKSN------IKVHLRTHTGEKPFRCDVCAKAFRQKAHLL 575 Query: 339 KFQTL 325 K Q + Sbjct: 576 KHQQM 580 >AE014297-842|AAF54310.1| 587|Drosophila melanogaster CG11966-PA protein. Length = 587 Score = 29.5 bits (63), Expect = 4.6 Identities = 17/65 (26%), Positives = 29/65 (44%) Frame = -3 Query: 519 GLLGNRSPLYRAVLCNYNL*NKKNRPQV*SEEVYLSIGKSKLPFNYNIICLKHKNILSIM 340 GLLG P++R +CN NK N +V+L + PF ++ + ++ Sbjct: 522 GLLGKEKPVHRCSICNRGFLNKSN------IKVHLRTHTGEKPFRCDVCAKAFRQKAHLL 575 Query: 339 KFQTL 325 K Q + Sbjct: 576 KHQQI 580 >AY122267-1|AAM52779.1| 205|Drosophila melanogaster SD20015p protein. Length = 205 Score = 29.1 bits (62), Expect = 6.1 Identities = 13/42 (30%), Positives = 26/42 (61%) Frame = +2 Query: 8 TYLFYSKYVSLRIY*VSLIKNKIMQKLSMSNINIVENYVDDL 133 T +F + + LR Y ++K+ ++K M ++N+ E YV+D+ Sbjct: 72 TMVFLTMQIFLR-YPKGVVKHHELRKCLMDDLNLTEEYVEDI 112 >AE014134-1872|AAS64676.1| 205|Drosophila melanogaster CG33677-PB, isoform B protein. Length = 205 Score = 29.1 bits (62), Expect = 6.1 Identities = 13/42 (30%), Positives = 26/42 (61%) Frame = +2 Query: 8 TYLFYSKYVSLRIY*VSLIKNKIMQKLSMSNINIVENYVDDL 133 T +F + + LR Y ++K+ ++K M ++N+ E YV+D+ Sbjct: 72 TMVFLTMQIFLR-YPKGVVKHHELRKCLMDDLNLTEEYVEDI 112 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 29,035,833 Number of Sequences: 53049 Number of extensions: 589324 Number of successful extensions: 1241 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1196 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1241 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3087795150 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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