Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0902
         (701 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    25   0.70 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.7  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   4.9  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   8.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.6  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 25.0 bits (52), Expect = 0.70
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 587 PLAPPTLPFQPYLTIPWF*LPAKSSIFF 670
           PL+ PT  +   L + WF +PA S + F
Sbjct: 256 PLSHPTYDWFEKLELKWFAVPAVSGMVF 283


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 595 PAYITIPTLFNYSVVLTTG 651
           P YI +P    Y+V+  TG
Sbjct: 49  PLYIVLPITVIYAVIFVTG 67


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 596 GQAVPQLCLYKHNST 552
           G+ +P+ CL+ HN T
Sbjct: 598 GKKMPRYCLFGHNVT 612


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -3

Query: 288 CAMCTRPMNAMTSQLPMYYMHCVLYSSIF 202
           CA+   P  A+ S    +Y+ C++   I+
Sbjct: 184 CALDLTPTYAVVSSSISFYVPCIVMLGIY 212


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -3

Query: 456  KKNRPQV*SEEVYLSIGKSKLPFNYNI 376
            K  RP +  +   L++ K++ PF  N+
Sbjct: 1057 KGTRPMIPDDNTSLALPKNEGPFRLNV 1083


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,637
Number of Sequences: 438
Number of extensions: 4383
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)