Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0901
(637 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF020267-1|AAC26597.1| 223|Homo sapiens myosin-IXb splice varia... 32 1.5
AY956763-1|AAX38250.1| 422|Homo sapiens heat shock protein 90Bb... 31 3.4
BX537764-1|CAD97829.1| 1546|Homo sapiens hypothetical protein pr... 30 7.9
BC117557-1|AAI17558.1| 1098|Homo sapiens GON4L protein protein. 30 7.9
BC115703-1|AAI15704.1| 1529|Homo sapiens gon-4-like (C. elegans)... 30 7.9
BC114629-1|AAI14630.1| 1529|Homo sapiens gon-4-like (C. elegans)... 30 7.9
BC036740-1|AAH36740.2| 981|Homo sapiens GON4L protein protein. 30 7.9
AY335492-1|AAR01262.1| 1529|Homo sapiens GON4L isoform B protein. 30 7.9
AY335491-1|AAR01261.1| 2241|Homo sapiens GON4L isoform C protein. 30 7.9
AY335490-1|AAR01260.1| 2241|Homo sapiens GON4L isoform A protein. 30 7.9
AL139128-5|CAH69947.1| 1529|Homo sapiens gon-4-like (C. elegans)... 30 7.9
AK222851-1|BAD96571.1| 852|Homo sapiens Hypothetical protein DK... 30 7.9
AK022985-1|BAB14347.1| 725|Homo sapiens protein ( Homo sapiens ... 30 7.9
AF057694-1|AAC13540.1| 1199|Homo sapiens TBP-associated factor T... 30 7.9
AF040701-1|AAC68502.1| 1189|Homo sapiens TATA binding protein as... 30 7.9
AF026445-1|AAC02966.1| 1199|Homo sapiens cofactor of initiator f... 30 7.9
AB232668-1|BAF51560.1| 1543|Homo sapiens YY1AP-related protein3 ... 30 7.9
AB195687-1|BAF51556.1| 2240|Homo sapiens YY1AP-related protein1 ... 30 7.9
>AF020267-1|AAC26597.1| 223|Homo sapiens myosin-IXb splice variant
protein.
Length = 223
Score = 32.3 bits (70), Expect = 1.5
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 312 LQSCTTLRFQLPSNTPIMS--KIMLPRSMSSHIPSRIP 419
L S T+R + P TPIMS I LP + SH+P P
Sbjct: 110 LSSFVTVRVKTPRRTPIMSTANIKLPPGLPSHLPRWAP 147
>AY956763-1|AAX38250.1| 422|Homo sapiens heat shock protein 90Bb
protein.
Length = 422
Score = 31.1 bits (67), Expect = 3.4
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -2
Query: 222 HVESKGLRESVLEQHDSILGYNVPLLDEKARHGERCFGKTQHGRGPR 82
++E ++E V+E+H LGY + L EK R E GK + +G +
Sbjct: 155 YLEEMQVKE-VVEKHSQFLGYPITLYLEKEREKEISDGKAEEEKGEK 200
>BX537764-1|CAD97829.1| 1546|Homo sapiens hypothetical protein
protein.
Length = 1546
Score = 29.9 bits (64), Expect = 7.9
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 204 APLIQHAGPIVHAAPVEILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 383
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 1151 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 1204
Query: 384 RS----MSSHIPSRIPTPAITSPNT 446
S ++ + + +P I S N+
Sbjct: 1205 TSFPCPLNQSLVASSVSPLIVSGNS 1229
>BC117557-1|AAI17558.1| 1098|Homo sapiens GON4L protein protein.
Length = 1098
Score = 29.9 bits (64), Expect = 7.9
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 204 APLIQHAGPIVHAAPVEILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 383
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 330 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 383
Query: 384 RS----MSSHIPSRIPTPAITSPNT 446
S ++ + + +P I S N+
Sbjct: 384 TSFPCPLNQSLVASSVSPLIVSGNS 408
>BC115703-1|AAI15704.1| 1529|Homo sapiens gon-4-like (C. elegans)
protein.
Length = 1529
Score = 29.9 bits (64), Expect = 7.9
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 204 APLIQHAGPIVHAAPVEILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 383
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 1134 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 1187
Query: 384 RS----MSSHIPSRIPTPAITSPNT 446
S ++ + + +P I S N+
Sbjct: 1188 TSFPCPLNQSLVASSVSPLIVSGNS 1212
>BC114629-1|AAI14630.1| 1529|Homo sapiens gon-4-like (C. elegans)
protein.
Length = 1529
Score = 29.9 bits (64), Expect = 7.9
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 204 APLIQHAGPIVHAAPVEILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 383
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 1134 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 1187
Query: 384 RS----MSSHIPSRIPTPAITSPNT 446
S ++ + + +P I S N+
Sbjct: 1188 TSFPCPLNQSLVASSVSPLIVSGNS 1212
>BC036740-1|AAH36740.2| 981|Homo sapiens GON4L protein protein.
Length = 981
Score = 29.9 bits (64), Expect = 7.9
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 204 APLIQHAGPIVHAAPVEILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 383
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 586 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 639
Query: 384 RS----MSSHIPSRIPTPAITSPNT 446
S ++ + + +P I S N+
Sbjct: 640 TSFPCPLNQSLVASSVSPLIVSGNS 664
>AY335492-1|AAR01262.1| 1529|Homo sapiens GON4L isoform B protein.
Length = 1529
Score = 29.9 bits (64), Expect = 7.9
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 204 APLIQHAGPIVHAAPVEILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 383
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 1134 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 1187
Query: 384 RS----MSSHIPSRIPTPAITSPNT 446
S ++ + + +P I S N+
Sbjct: 1188 TSFPCPLNQSLVASSVSPLIVSGNS 1212
>AY335491-1|AAR01261.1| 2241|Homo sapiens GON4L isoform C protein.
Length = 2241
Score = 29.9 bits (64), Expect = 7.9
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 204 APLIQHAGPIVHAAPVEILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 383
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 1134 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 1187
Query: 384 RS----MSSHIPSRIPTPAITSPNT 446
S ++ + + +P I S N+
Sbjct: 1188 TSFPCPLNQSLVASSVSPLIVSGNS 1212
>AY335490-1|AAR01260.1| 2241|Homo sapiens GON4L isoform A protein.
Length = 2241
Score = 29.9 bits (64), Expect = 7.9
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 204 APLIQHAGPIVHAAPVEILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 383
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 1134 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 1187
Query: 384 RS----MSSHIPSRIPTPAITSPNT 446
S ++ + + +P I S N+
Sbjct: 1188 TSFPCPLNQSLVASSVSPLIVSGNS 1212
>AL139128-5|CAH69947.1| 1529|Homo sapiens gon-4-like (C. elegans)
protein.
Length = 1529
Score = 29.9 bits (64), Expect = 7.9
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 204 APLIQHAGPIVHAAPVEILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 383
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 1134 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 1187
Query: 384 RS----MSSHIPSRIPTPAITSPNT 446
S ++ + + +P I S N+
Sbjct: 1188 TSFPCPLNQSLVASSVSPLIVSGNS 1212
>AK222851-1|BAD96571.1| 852|Homo sapiens Hypothetical protein
DKFZp761I241 (Fragment) variant protein.
Length = 852
Score = 29.9 bits (64), Expect = 7.9
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 204 APLIQHAGPIVHAAPVEILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 383
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 457 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 510
Query: 384 RS----MSSHIPSRIPTPAITSPNT 446
S ++ + + +P I S N+
Sbjct: 511 TSFPCPLNQSLVASSVSPLIVSGNS 535
>AK022985-1|BAB14347.1| 725|Homo sapiens protein ( Homo sapiens
cDNA FLJ12923 fis, clone NT2RP2004681, weakly similar to
NEUROFILAMENT TRIPLET H PROTEIN. ).
Length = 725
Score = 29.9 bits (64), Expect = 7.9
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 204 APLIQHAGPIVHAAPVEILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 383
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 330 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 383
Query: 384 RS----MSSHIPSRIPTPAITSPNT 446
S ++ + + +P I S N+
Sbjct: 384 TSFPCPLNQSLVASSVSPLIVSGNS 408
>AF057694-1|AAC13540.1| 1199|Homo sapiens TBP-associated factor
TAFII150 protein.
Length = 1199
Score = 29.9 bits (64), Expect = 7.9
Identities = 26/108 (24%), Positives = 42/108 (38%)
Frame = +2
Query: 140 SSSNGTLYPSIESCCSSTDSRSPFDSTCRSYCSRRPRGNSSYIHASPVVQHFSPVQHAPV 319
+SS L P + C ST + P S +R+ G +P+ P AP+
Sbjct: 1079 ASSRSALIPQHSAGCDSTPTTKPQWSL---ELARKGTGKEQ----APLEMSMHPAASAPL 1131
Query: 320 VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGD 463
A +HSDH H + + H HK +H++++ D
Sbjct: 1132 SVFTKESTASKHSDHHHHHHHEHKK--KKKKHKHKHKHKHKHDSKEKD 1177
>AF040701-1|AAC68502.1| 1189|Homo sapiens TATA binding protein
associated factor protein.
Length = 1189
Score = 29.9 bits (64), Expect = 7.9
Identities = 26/108 (24%), Positives = 42/108 (38%)
Frame = +2
Query: 140 SSSNGTLYPSIESCCSSTDSRSPFDSTCRSYCSRRPRGNSSYIHASPVVQHFSPVQHAPV 319
+SS L P + C ST + P S +R+ G +P+ P AP+
Sbjct: 1069 ASSRSALIPQHSAGCDSTPTTKPQWSL---ELARKGTGKEQ----APLEMSMHPAASAPL 1121
Query: 320 VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGD 463
A +HSDH H + + H HK +H++++ D
Sbjct: 1122 SVFTKESTASKHSDHHHHHHHEHKK--KKKKHKHKHKHKHKHDSKEKD 1167
>AF026445-1|AAC02966.1| 1199|Homo sapiens cofactor of initiator
function protein.
Length = 1199
Score = 29.9 bits (64), Expect = 7.9
Identities = 26/108 (24%), Positives = 42/108 (38%)
Frame = +2
Query: 140 SSSNGTLYPSIESCCSSTDSRSPFDSTCRSYCSRRPRGNSSYIHASPVVQHFSPVQHAPV 319
+SS L P + C ST + P S +R+ G +P+ P AP+
Sbjct: 1079 ASSRSALIPQHSAGCDSTPTTKPQWSL---ELARKGTGKEQ----APLEMSMHPAASAPL 1131
Query: 320 VHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHETRDGD 463
A +HSDH H + + H HK +H++++ D
Sbjct: 1132 SVFTKESTASKHSDHHHHHHHEHKK--KKKKHKHKHKHKHKHDSKEKD 1177
>AB232668-1|BAF51560.1| 1543|Homo sapiens YY1AP-related protein3
protein.
Length = 1543
Score = 29.9 bits (64), Expect = 7.9
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 204 APLIQHAGPIVHAAPVEILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 383
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 1134 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 1187
Query: 384 RS----MSSHIPSRIPTPAITSPNT 446
S ++ + + +P I S N+
Sbjct: 1188 TSFPCPLNQSLVASSVSPLIVSGNS 1212
>AB195687-1|BAF51556.1| 2240|Homo sapiens YY1AP-related protein1
protein.
Length = 2240
Score = 29.9 bits (64), Expect = 7.9
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +3
Query: 204 APLIQHAGPIVHAAPVEILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIMLP 383
AP+I H ++ P ++I L CNM+Q Q P PI + ++ P
Sbjct: 1134 APVIHHPASVIFTVPATTVKIVSL------GGGCNMIQPVNAAVAQSPQTIPITTLLVNP 1187
Query: 384 RS----MSSHIPSRIPTPAITSPNT 446
S ++ + + +P I S N+
Sbjct: 1188 TSFPCPLNQSLVASSVSPLIVSGNS 1212
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,537,049
Number of Sequences: 237096
Number of extensions: 2500308
Number of successful extensions: 11503
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 10845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11499
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -