Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0901
(637 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 36 0.024
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 33 0.23
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 31 0.69
AF016681-18|AAO91734.1| 330|Caenorhabditis elegans Serpentine r... 31 0.69
AC006730-9|AAO91686.1| 330|Caenorhabditis elegans Serpentine re... 31 0.69
U88308-9|AAB42325.1| 933|Caenorhabditis elegans Patched related... 29 2.8
U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in bl... 29 2.8
AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical... 29 3.7
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 29 3.7
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 28 4.9
AF106579-5|AAC78198.1| 174|Caenorhabditis elegans Hypothetical ... 28 4.9
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 28 6.4
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 28 6.4
AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical ... 28 6.4
AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical ... 28 6.4
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ... 28 6.4
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 28 6.4
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 28 6.4
Z81464-7|CAB03857.2| 338|Caenorhabditis elegans Hypothetical pr... 27 8.5
U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical p... 27 8.5
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 27 8.5
AL032657-14|CAC42375.2| 190|Caenorhabditis elegans Hypothetical... 27 8.5
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 35.9 bits (79), Expect = 0.024
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Frame = +2
Query: 254 NSSYIHASPVVQHFSPVQHAPVVHHAAI--PIAVEHSDHVE--DHAPA--KYEF--SYSV 409
+S+ H+S +H + +PV + ++ P A EH +H E H+PA + EF S SV
Sbjct: 702 SSNQFHSS---EHIEEARQSPVTNQESVHSPHASEHFEHREVVPHSPAASQEEFGRSPSV 758
Query: 410 EDPHTGDHKSQHE 448
PH +H HE
Sbjct: 759 HSPHVSEHFEHHE 771
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/68 (23%), Positives = 26/68 (38%)
Frame = +2
Query: 245 PRGNSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHT 424
P S + +S +HF +H V + S+H+E+ + SV PH
Sbjct: 675 PAARSPSVQSSRTSEHF---EHRGEVPQSPSSNQFHSSEHIEEARQSPVTNQESVHSPHA 731
Query: 425 GDHKSQHE 448
+H E
Sbjct: 732 SEHFEHRE 739
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 32.7 bits (71), Expect = 0.23
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 204 APLIQHAGPIVH-AAPVEILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIML 380
A L+ H GP+ + ++ L+I +LR +N+ L SC + N+ S
Sbjct: 153 ADLVPHKGPVSYDRLHIDSLKI-ILRGSANSITLSRFFDSCLDRTRRTSLNSSSSSFFTK 211
Query: 381 PRSMSSHIPSRIPTPAITSPN 443
PRSM+ ++P + A + N
Sbjct: 212 PRSMTPNLPGASASAAAAAAN 232
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 31.1 bits (67), Expect = 0.69
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +2
Query: 254 NSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPA 385
+SSYIH+S +QH H P + ++H H P+
Sbjct: 89 SSSYIHSSQQIQHPPQQHHPPPPSPPPVAETIQHQPHPSQQQPS 132
>AF016681-18|AAO91734.1| 330|Caenorhabditis elegans Serpentine
receptor, class i protein57 protein.
Length = 330
Score = 31.1 bits (67), Expect = 0.69
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +1
Query: 88 ATAMLC-LPKASFAMTSLL-IKQRHIIPQY*VMLLQY*LTQPL*FNMPVLLFTPPPW-KF 258
AT+++C LP S L + +I + ++L+ L P N+ VL+FT PP+ KF
Sbjct: 246 ATSIICFLPPISLVFVVFLKLPNPQVIVE--LLLVVACLHSPA--NVTVLMFTFPPYRKF 301
Query: 259 FVYTCFASSPT-LQPCATCSS 318
T F PT L+P + SS
Sbjct: 302 VCVTIFRQKPTGLEPISAKSS 322
>AC006730-9|AAO91686.1| 330|Caenorhabditis elegans Serpentine
receptor, class i protein78 protein.
Length = 330
Score = 31.1 bits (67), Expect = 0.69
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +1
Query: 88 ATAMLC-LPKASFAMTSLL-IKQRHIIPQY*VMLLQY*LTQPL*FNMPVLLFTPPPW-KF 258
AT+++C LP S L + +I + ++L+ L P N+ VL+FT PP+ KF
Sbjct: 246 ATSIICFLPPISLVFVVFLKLPNPQVIVE--LLLVVACLHSPA--NVTVLMFTFPPYRKF 301
Query: 259 FVYTCFASSPT-LQPCATCSS 318
T F PT L+P + SS
Sbjct: 302 VCVTIFRQKPTGLEPISAKSS 322
>U88308-9|AAB42325.1| 933|Caenorhabditis elegans Patched related
family protein 2 protein.
Length = 933
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 445 VLGLVIAGVGILDGI*ELILRGSMIFDMIGV 353
+LG+V AG+ IL G+ L L G D++GV
Sbjct: 304 ILGVVSAGIAILTGVGFLSLMGMPYNDIVGV 334
>U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 3 protein.
Length = 242
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +2
Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRGNSSYIHASPVVQHFSPVQHAPVVHHAAIP 340
P+ + C + +PF + C+S C + + +S A+ +PVQH P P
Sbjct: 21 PACQQSCQNQCKSAPFVNQCQSSCQQNCQTSSCSASAT-----LAPVQHVPQCQQQCAP 74
>AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical
protein Y18H1A.9 protein.
Length = 488
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +2
Query: 113 KHRSP*RAFSSSNGTLYPSIESCCSSTDSRSPFD 214
K+RSP + + G P +CC D FD
Sbjct: 247 KNRSPPKCIQQATGLFQPPTTTCCQGVDLNRNFD 280
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRGNSSYIHASPVVQHFSPVQHAP 316
P+ + C +PF + C+S C + + +S Y A+P +PVQ P
Sbjct: 106 PACQQSCQMQCQSAPFVNECQSQCQQSCQTSSCYAPAAP-----APVQCMP 151
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/60 (28%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Frame = +2
Query: 269 HASPVVQ-HFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQH 445
H SP H HAP H H H E H + + H G H S H
Sbjct: 497 HHSPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHH 556
>AF106579-5|AAC78198.1| 174|Caenorhabditis elegans Hypothetical
protein F54E2.2 protein.
Length = 174
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 330 AWCTTGACCTGLKCWTTG 277
+WCTT C G KC TG
Sbjct: 150 SWCTTDQDCKGKKCCPTG 167
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -3
Query: 467 RHHHHGFRVGTCDRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQR 327
RH HHG R G R G RRN S D D+ R+Q+ ++
Sbjct: 85 RHGHHG-RHGM-GRHGGHGRRNKSGSDSDSSDSSEDKKKRKQMRDKK 129
>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
Length = 1666
Score = 27.9 bits (59), Expect = 6.4
Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Frame = +2
Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRG----NSSYIHASPVVQHFSPVQHAPV-VHH 328
P E S + + FDS R+P ++S + S V SP+ P +H+
Sbjct: 296 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 353
Query: 329 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 490
+ I + + H+ H +E V + SQH DG ++G ++ +
Sbjct: 354 LPVLIVMNNDGHLSTHRITLHEGVTGVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 408
>AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical
protein W03F11.6e protein.
Length = 1039
Score = 27.9 bits (59), Expect = 6.4
Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Frame = +2
Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRG----NSSYIHASPVVQHFSPVQHAPV-VHH 328
P E S + + FDS R+P ++S + S V SP+ P +H+
Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351
Query: 329 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 490
+ I + + H+ H +E V + SQH DG ++G ++ +
Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical
protein W03F11.6d protein.
Length = 1184
Score = 27.9 bits (59), Expect = 6.4
Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Frame = +2
Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRG----NSSYIHASPVVQHFSPVQHAPV-VHH 328
P E S + + FDS R+P ++S + S V SP+ P +H+
Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351
Query: 329 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 490
+ I + + H+ H +E V + SQH DG ++G ++ +
Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
protein W03F11.6c protein.
Length = 1419
Score = 27.9 bits (59), Expect = 6.4
Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Frame = +2
Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRG----NSSYIHASPVVQHFSPVQHAPV-VHH 328
P E S + + FDS R+P ++S + S V SP+ P +H+
Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351
Query: 329 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 490
+ I + + H+ H +E V + SQH DG ++G ++ +
Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 27.9 bits (59), Expect = 6.4
Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Frame = +2
Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRG----NSSYIHASPVVQHFSPVQHAPV-VHH 328
P E S + + FDS R+P ++S + S V SP+ P +H+
Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351
Query: 329 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 490
+ I + + H+ H +E V + SQH DG ++G ++ +
Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 27.9 bits (59), Expect = 6.4
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Frame = -3
Query: 491 GVESIRLSRHHHHGFRVGTC--DRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGAR 318
G + R + HHH R D R D R R H + R DR R S+R R
Sbjct: 271 GADRKRSTEQHHHSHRSSRDHRDHRHRDHRGEHREHREHKEHRRDDR--HRSERSERSER 328
Query: 317 LE 312
E
Sbjct: 329 SE 330
>Z81464-7|CAB03857.2| 338|Caenorhabditis elegans Hypothetical
protein C08E8.2 protein.
Length = 338
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = -3
Query: 395 THTSREHDLRHDRSVRRQLESQRGARLEH--VAQG*SVGLLAKHVYTKN 255
TH+S HD RH ++ LE Q R+ H ++ G +V +LAK++Y N
Sbjct: 139 THSSIRHDCRHFFNL--VLEHQGDGRILHLKISTG-TVKVLAKNLYFPN 184
>U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical
protein F27C1.11 protein.
Length = 1037
Score = 27.5 bits (58), Expect = 8.5
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Frame = +2
Query: 104 VFPKHRSP*RAFS-----SSNGTLYPSIE--SCCSSTDSRSPFDSTCRSYCSRRPRGN 256
+ PK +P A+S SS G P+ S +S + R P S Y SRRP+ N
Sbjct: 145 ILPKRYAPREAYSISEKKSSTGGSDPATSGNSSGNSIEKRQPLPSINNRYVSRRPQEN 202
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +3
Query: 345 PSNTPIMSKIMLPRSMSSHIPSRIPTPAITSPNTKPVMVMS*KANTLYSSLMVPSQGRIH 524
P N I ++ + + + +P IP P + P + VM ++ K N LY P +
Sbjct: 201 PPNLQISPQMHINPNFPTLVPLPIPQPVVLEPTKEEVMKIASKKN-LYGMPRFPIEPHRS 259
Query: 525 S*PP 536
PP
Sbjct: 260 PSPP 263
>AL032657-14|CAC42375.2| 190|Caenorhabditis elegans Hypothetical
protein Y47H9C.15 protein.
Length = 190
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 406 RRGSPHRRSQVPTRNP*W*CRERRILSTPA*WFHRKVEYTADHHNGFN 549
R+G+ + + T+N RER+ + P W H K T+ NGF+
Sbjct: 47 RQGAKEKFEEEATKNK---ARERKWVEEPIFWNHHKKFLTSLQKNGFD 91
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,999,131
Number of Sequences: 27780
Number of extensions: 372419
Number of successful extensions: 1360
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1343
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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