BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0901 (637 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 36 0.024 AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 33 0.23 U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 31 0.69 AF016681-18|AAO91734.1| 330|Caenorhabditis elegans Serpentine r... 31 0.69 AC006730-9|AAO91686.1| 330|Caenorhabditis elegans Serpentine re... 31 0.69 U88308-9|AAB42325.1| 933|Caenorhabditis elegans Patched related... 29 2.8 U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in bl... 29 2.8 AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical... 29 3.7 AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 29 3.7 AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 28 4.9 AF106579-5|AAC78198.1| 174|Caenorhabditis elegans Hypothetical ... 28 4.9 U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 28 6.4 AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 28 6.4 AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical ... 28 6.4 AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical ... 28 6.4 AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ... 28 6.4 AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 28 6.4 AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 28 6.4 Z81464-7|CAB03857.2| 338|Caenorhabditis elegans Hypothetical pr... 27 8.5 U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical p... 27 8.5 U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 27 8.5 AL032657-14|CAC42375.2| 190|Caenorhabditis elegans Hypothetical... 27 8.5 >AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical protein H11E01.3 protein. Length = 1464 Score = 35.9 bits (79), Expect = 0.024 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 8/73 (10%) Frame = +2 Query: 254 NSSYIHASPVVQHFSPVQHAPVVHHAAI--PIAVEHSDHVE--DHAPA--KYEF--SYSV 409 +S+ H+S +H + +PV + ++ P A EH +H E H+PA + EF S SV Sbjct: 702 SSNQFHSS---EHIEEARQSPVTNQESVHSPHASEHFEHREVVPHSPAASQEEFGRSPSV 758 Query: 410 EDPHTGDHKSQHE 448 PH +H HE Sbjct: 759 HSPHVSEHFEHHE 771 Score = 27.5 bits (58), Expect = 8.5 Identities = 16/68 (23%), Positives = 26/68 (38%) Frame = +2 Query: 245 PRGNSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHT 424 P S + +S +HF +H V + S+H+E+ + SV PH Sbjct: 675 PAARSPSVQSSRTSEHF---EHRGEVPQSPSSNQFHSSEHIEEARQSPVTNQESVHSPHA 731 Query: 425 GDHKSQHE 448 +H E Sbjct: 732 SEHFEHRE 739 >AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical protein Y116A8C.10b protein. Length = 248 Score = 32.7 bits (71), Expect = 0.23 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%) Frame = +3 Query: 204 APLIQHAGPIVH-AAPVEILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIML 380 A L+ H GP+ + ++ L+I +LR +N+ L SC + N+ S Sbjct: 153 ADLVPHKGPVSYDRLHIDSLKI-ILRGSANSITLSRFFDSCLDRTRRTSLNSSSSSFFTK 211 Query: 381 PRSMSSHIPSRIPTPAITSPN 443 PRSM+ ++P + A + N Sbjct: 212 PRSMTPNLPGASASAAAAAAN 232 >U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting protein protein16, isoform d protein. Length = 1030 Score = 31.1 bits (67), Expect = 0.69 Identities = 13/44 (29%), Positives = 20/44 (45%) Frame = +2 Query: 254 NSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPA 385 +SSYIH+S +QH H P + ++H H P+ Sbjct: 89 SSSYIHSSQQIQHPPQQHHPPPPSPPPVAETIQHQPHPSQQQPS 132 >AF016681-18|AAO91734.1| 330|Caenorhabditis elegans Serpentine receptor, class i protein57 protein. Length = 330 Score = 31.1 bits (67), Expect = 0.69 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 4/81 (4%) Frame = +1 Query: 88 ATAMLC-LPKASFAMTSLL-IKQRHIIPQY*VMLLQY*LTQPL*FNMPVLLFTPPPW-KF 258 AT+++C LP S L + +I + ++L+ L P N+ VL+FT PP+ KF Sbjct: 246 ATSIICFLPPISLVFVVFLKLPNPQVIVE--LLLVVACLHSPA--NVTVLMFTFPPYRKF 301 Query: 259 FVYTCFASSPT-LQPCATCSS 318 T F PT L+P + SS Sbjct: 302 VCVTIFRQKPTGLEPISAKSS 322 >AC006730-9|AAO91686.1| 330|Caenorhabditis elegans Serpentine receptor, class i protein78 protein. Length = 330 Score = 31.1 bits (67), Expect = 0.69 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 4/81 (4%) Frame = +1 Query: 88 ATAMLC-LPKASFAMTSLL-IKQRHIIPQY*VMLLQY*LTQPL*FNMPVLLFTPPPW-KF 258 AT+++C LP S L + +I + ++L+ L P N+ VL+FT PP+ KF Sbjct: 246 ATSIICFLPPISLVFVVFLKLPNPQVIVE--LLLVVACLHSPA--NVTVLMFTFPPYRKF 301 Query: 259 FVYTCFASSPT-LQPCATCSS 318 T F PT L+P + SS Sbjct: 302 VCVTIFRQKPTGLEPISAKSS 322 >U88308-9|AAB42325.1| 933|Caenorhabditis elegans Patched related family protein 2 protein. Length = 933 Score = 29.1 bits (62), Expect = 2.8 Identities = 14/31 (45%), Positives = 20/31 (64%) Frame = -1 Query: 445 VLGLVIAGVGILDGI*ELILRGSMIFDMIGV 353 +LG+V AG+ IL G+ L L G D++GV Sbjct: 304 ILGVVSAGIAILTGVGFLSLMGMPYNDIVGV 334 >U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in blocked unfolded proteinresponse protein 3 protein. Length = 242 Score = 29.1 bits (62), Expect = 2.8 Identities = 15/59 (25%), Positives = 26/59 (44%) Frame = +2 Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRGNSSYIHASPVVQHFSPVQHAPVVHHAAIP 340 P+ + C + +PF + C+S C + + +S A+ +PVQH P P Sbjct: 21 PACQQSCQNQCKSAPFVNQCQSSCQQNCQTSSCSASAT-----LAPVQHVPQCQQQCAP 74 >AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical protein Y18H1A.9 protein. Length = 488 Score = 28.7 bits (61), Expect = 3.7 Identities = 11/34 (32%), Positives = 15/34 (44%) Frame = +2 Query: 113 KHRSP*RAFSSSNGTLYPSIESCCSSTDSRSPFD 214 K+RSP + + G P +CC D FD Sbjct: 247 KNRSPPKCIQQATGLFQPPTTTCCQGVDLNRNFD 280 >AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical protein Y5H2A.4 protein. Length = 558 Score = 28.7 bits (61), Expect = 3.7 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +2 Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRGNSSYIHASPVVQHFSPVQHAP 316 P+ + C +PF + C+S C + + +S Y A+P +PVQ P Sbjct: 106 PACQQSCQMQCQSAPFVNECQSQCQQSCQTSSCYAPAAP-----APVQCMP 151 >AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical protein Y39B6A.1 protein. Length = 735 Score = 28.3 bits (60), Expect = 4.9 Identities = 17/60 (28%), Positives = 19/60 (31%), Gaps = 1/60 (1%) Frame = +2 Query: 269 HASPVVQ-HFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQH 445 H SP H HAP H H H E H + + H G H S H Sbjct: 497 HHSPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHH 556 >AF106579-5|AAC78198.1| 174|Caenorhabditis elegans Hypothetical protein F54E2.2 protein. Length = 174 Score = 28.3 bits (60), Expect = 4.9 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = -2 Query: 330 AWCTTGACCTGLKCWTTG 277 +WCTT C G KC TG Sbjct: 150 SWCTTDQDCKGKKCCPTG 167 >U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical protein C33G8.2 protein. Length = 390 Score = 27.9 bits (59), Expect = 6.4 Identities = 17/47 (36%), Positives = 22/47 (46%) Frame = -3 Query: 467 RHHHHGFRVGTCDRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQR 327 RH HHG R G R G RRN S D D+ R+Q+ ++ Sbjct: 85 RHGHHG-RHGM-GRHGGHGRRNKSGSDSDSSDSSEDKKKRKQMRDKK 129 >AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. Length = 1666 Score = 27.9 bits (59), Expect = 6.4 Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%) Frame = +2 Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRG----NSSYIHASPVVQHFSPVQHAPV-VHH 328 P E S + + FDS R+P ++S + S V SP+ P +H+ Sbjct: 296 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 353 Query: 329 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 490 + I + + H+ H +E V + SQH DG ++G ++ + Sbjct: 354 LPVLIVMNNDGHLSTHRITLHEGVTGVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 408 >AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical protein W03F11.6e protein. Length = 1039 Score = 27.9 bits (59), Expect = 6.4 Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%) Frame = +2 Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRG----NSSYIHASPVVQHFSPVQHAPV-VHH 328 P E S + + FDS R+P ++S + S V SP+ P +H+ Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351 Query: 329 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 490 + I + + H+ H +E V + SQH DG ++G ++ + Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406 >AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical protein W03F11.6d protein. Length = 1184 Score = 27.9 bits (59), Expect = 6.4 Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%) Frame = +2 Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRG----NSSYIHASPVVQHFSPVQHAPV-VHH 328 P E S + + FDS R+P ++S + S V SP+ P +H+ Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351 Query: 329 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 490 + I + + H+ H +E V + SQH DG ++G ++ + Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406 >AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical protein W03F11.6c protein. Length = 1419 Score = 27.9 bits (59), Expect = 6.4 Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%) Frame = +2 Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRG----NSSYIHASPVVQHFSPVQHAPV-VHH 328 P E S + + FDS R+P ++S + S V SP+ P +H+ Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351 Query: 329 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 490 + I + + H+ H +E V + SQH DG ++G ++ + Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406 >AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical protein W03F11.6a protein. Length = 1658 Score = 27.9 bits (59), Expect = 6.4 Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%) Frame = +2 Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRG----NSSYIHASPVVQHFSPVQHAPV-VHH 328 P E S + + FDS R+P ++S + S V SP+ P +H+ Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351 Query: 329 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 490 + I + + H+ H +E V + SQH DG ++G ++ + Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406 >AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical protein Y119D3B.12a protein. Length = 339 Score = 27.9 bits (59), Expect = 6.4 Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 2/62 (3%) Frame = -3 Query: 491 GVESIRLSRHHHHGFRVGTC--DRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGAR 318 G + R + HHH R D R D R R H + R DR R S+R R Sbjct: 271 GADRKRSTEQHHHSHRSSRDHRDHRHRDHRGEHREHREHKEHRRDDR--HRSERSERSER 328 Query: 317 LE 312 E Sbjct: 329 SE 330 >Z81464-7|CAB03857.2| 338|Caenorhabditis elegans Hypothetical protein C08E8.2 protein. Length = 338 Score = 27.5 bits (58), Expect = 8.5 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Frame = -3 Query: 395 THTSREHDLRHDRSVRRQLESQRGARLEH--VAQG*SVGLLAKHVYTKN 255 TH+S HD RH ++ LE Q R+ H ++ G +V +LAK++Y N Sbjct: 139 THSSIRHDCRHFFNL--VLEHQGDGRILHLKISTG-TVKVLAKNLYFPN 184 >U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical protein F27C1.11 protein. Length = 1037 Score = 27.5 bits (58), Expect = 8.5 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 7/58 (12%) Frame = +2 Query: 104 VFPKHRSP*RAFS-----SSNGTLYPSIE--SCCSSTDSRSPFDSTCRSYCSRRPRGN 256 + PK +P A+S SS G P+ S +S + R P S Y SRRP+ N Sbjct: 145 ILPKRYAPREAYSISEKKSSTGGSDPATSGNSSGNSIEKRQPLPSINNRYVSRRPQEN 202 >U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical protein T09D3.3 protein. Length = 592 Score = 27.5 bits (58), Expect = 8.5 Identities = 17/64 (26%), Positives = 28/64 (43%) Frame = +3 Query: 345 PSNTPIMSKIMLPRSMSSHIPSRIPTPAITSPNTKPVMVMS*KANTLYSSLMVPSQGRIH 524 P N I ++ + + + +P IP P + P + VM ++ K N LY P + Sbjct: 201 PPNLQISPQMHINPNFPTLVPLPIPQPVVLEPTKEEVMKIASKKN-LYGMPRFPIEPHRS 259 Query: 525 S*PP 536 PP Sbjct: 260 PSPP 263 >AL032657-14|CAC42375.2| 190|Caenorhabditis elegans Hypothetical protein Y47H9C.15 protein. Length = 190 Score = 27.5 bits (58), Expect = 8.5 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = +1 Query: 406 RRGSPHRRSQVPTRNP*W*CRERRILSTPA*WFHRKVEYTADHHNGFN 549 R+G+ + + T+N RER+ + P W H K T+ NGF+ Sbjct: 47 RQGAKEKFEEEATKNK---ARERKWVEEPIFWNHHKKFLTSLQKNGFD 91 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,999,131 Number of Sequences: 27780 Number of extensions: 372419 Number of successful extensions: 1360 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 1226 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1343 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1406256614 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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