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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0901
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ...    36   0.024
AL117204-37|CAB55148.2|  248|Caenorhabditis elegans Hypothetical...    33   0.23 
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin...    31   0.69 
AF016681-18|AAO91734.1|  330|Caenorhabditis elegans Serpentine r...    31   0.69 
AC006730-9|AAO91686.1|  330|Caenorhabditis elegans Serpentine re...    31   0.69 
U88308-9|AAB42325.1|  933|Caenorhabditis elegans Patched related...    29   2.8  
U58742-4|AAB36856.1|  242|Caenorhabditis elegans Activated in bl...    29   2.8  
AC024751-13|AAK21512.2|  488|Caenorhabditis elegans Hypothetical...    29   3.7  
AC006809-3|AAY86286.1|  558|Caenorhabditis elegans Hypothetical ...    29   3.7  
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    28   4.9  
AF106579-5|AAC78198.1|  174|Caenorhabditis elegans Hypothetical ...    28   4.9  
U53154-11|AAC25848.1|  390|Caenorhabditis elegans Hypothetical p...    28   6.4  
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.       28   6.4  
AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical ...    28   6.4  
AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical ...    28   6.4  
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ...    28   6.4  
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ...    28   6.4  
AC006714-6|AAN84810.2|  339|Caenorhabditis elegans Hypothetical ...    28   6.4  
Z81464-7|CAB03857.2|  338|Caenorhabditis elegans Hypothetical pr...    27   8.5  
U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical p...    27   8.5  
U64835-5|AAG24196.1|  592|Caenorhabditis elegans Hypothetical pr...    27   8.5  
AL032657-14|CAC42375.2|  190|Caenorhabditis elegans Hypothetical...    27   8.5  

>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
           protein H11E01.3 protein.
          Length = 1464

 Score = 35.9 bits (79), Expect = 0.024
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
 Frame = +2

Query: 254 NSSYIHASPVVQHFSPVQHAPVVHHAAI--PIAVEHSDHVE--DHAPA--KYEF--SYSV 409
           +S+  H+S   +H    + +PV +  ++  P A EH +H E   H+PA  + EF  S SV
Sbjct: 702 SSNQFHSS---EHIEEARQSPVTNQESVHSPHASEHFEHREVVPHSPAASQEEFGRSPSV 758

Query: 410 EDPHTGDHKSQHE 448
             PH  +H   HE
Sbjct: 759 HSPHVSEHFEHHE 771



 Score = 27.5 bits (58), Expect = 8.5
 Identities = 16/68 (23%), Positives = 26/68 (38%)
 Frame = +2

Query: 245 PRGNSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHT 424
           P   S  + +S   +HF   +H   V  +        S+H+E+   +      SV  PH 
Sbjct: 675 PAARSPSVQSSRTSEHF---EHRGEVPQSPSSNQFHSSEHIEEARQSPVTNQESVHSPHA 731

Query: 425 GDHKSQHE 448
            +H    E
Sbjct: 732 SEHFEHRE 739


>AL117204-37|CAB55148.2|  248|Caenorhabditis elegans Hypothetical
           protein Y116A8C.10b protein.
          Length = 248

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
 Frame = +3

Query: 204 APLIQHAGPIVH-AAPVEILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIML 380
           A L+ H GP+ +    ++ L+I +LR  +N+  L     SC     +   N+   S    
Sbjct: 153 ADLVPHKGPVSYDRLHIDSLKI-ILRGSANSITLSRFFDSCLDRTRRTSLNSSSSSFFTK 211

Query: 381 PRSMSSHIPSRIPTPAITSPN 443
           PRSM+ ++P    + A  + N
Sbjct: 212 PRSMTPNLPGASASAAAAAAN 232


>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
           protein protein16, isoform d protein.
          Length = 1030

 Score = 31.1 bits (67), Expect = 0.69
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +2

Query: 254 NSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPA 385
           +SSYIH+S  +QH     H P      +   ++H  H     P+
Sbjct: 89  SSSYIHSSQQIQHPPQQHHPPPPSPPPVAETIQHQPHPSQQQPS 132


>AF016681-18|AAO91734.1|  330|Caenorhabditis elegans Serpentine
           receptor, class i protein57 protein.
          Length = 330

 Score = 31.1 bits (67), Expect = 0.69
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
 Frame = +1

Query: 88  ATAMLC-LPKASFAMTSLL-IKQRHIIPQY*VMLLQY*LTQPL*FNMPVLLFTPPPW-KF 258
           AT+++C LP  S      L +    +I +  ++L+   L  P   N+ VL+FT PP+ KF
Sbjct: 246 ATSIICFLPPISLVFVVFLKLPNPQVIVE--LLLVVACLHSPA--NVTVLMFTFPPYRKF 301

Query: 259 FVYTCFASSPT-LQPCATCSS 318
              T F   PT L+P +  SS
Sbjct: 302 VCVTIFRQKPTGLEPISAKSS 322


>AC006730-9|AAO91686.1|  330|Caenorhabditis elegans Serpentine
           receptor, class i protein78 protein.
          Length = 330

 Score = 31.1 bits (67), Expect = 0.69
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
 Frame = +1

Query: 88  ATAMLC-LPKASFAMTSLL-IKQRHIIPQY*VMLLQY*LTQPL*FNMPVLLFTPPPW-KF 258
           AT+++C LP  S      L +    +I +  ++L+   L  P   N+ VL+FT PP+ KF
Sbjct: 246 ATSIICFLPPISLVFVVFLKLPNPQVIVE--LLLVVACLHSPA--NVTVLMFTFPPYRKF 301

Query: 259 FVYTCFASSPT-LQPCATCSS 318
              T F   PT L+P +  SS
Sbjct: 302 VCVTIFRQKPTGLEPISAKSS 322


>U88308-9|AAB42325.1|  933|Caenorhabditis elegans Patched related
           family protein 2 protein.
          Length = 933

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -1

Query: 445 VLGLVIAGVGILDGI*ELILRGSMIFDMIGV 353
           +LG+V AG+ IL G+  L L G    D++GV
Sbjct: 304 ILGVVSAGIAILTGVGFLSLMGMPYNDIVGV 334


>U58742-4|AAB36856.1|  242|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 3 protein.
          Length = 242

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 15/59 (25%), Positives = 26/59 (44%)
 Frame = +2

Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRGNSSYIHASPVVQHFSPVQHAPVVHHAAIP 340
           P+ +  C +    +PF + C+S C +  + +S    A+      +PVQH P       P
Sbjct: 21  PACQQSCQNQCKSAPFVNQCQSSCQQNCQTSSCSASAT-----LAPVQHVPQCQQQCAP 74


>AC024751-13|AAK21512.2|  488|Caenorhabditis elegans Hypothetical
           protein Y18H1A.9 protein.
          Length = 488

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +2

Query: 113 KHRSP*RAFSSSNGTLYPSIESCCSSTDSRSPFD 214
           K+RSP +    + G   P   +CC   D    FD
Sbjct: 247 KNRSPPKCIQQATGLFQPPTTTCCQGVDLNRNFD 280


>AC006809-3|AAY86286.1|  558|Caenorhabditis elegans Hypothetical
           protein Y5H2A.4 protein.
          Length = 558

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +2

Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRGNSSYIHASPVVQHFSPVQHAP 316
           P+ +  C      +PF + C+S C +  + +S Y  A+P     +PVQ  P
Sbjct: 106 PACQQSCQMQCQSAPFVNECQSQCQQSCQTSSCYAPAAP-----APVQCMP 151


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 17/60 (28%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
 Frame = +2

Query: 269 HASPVVQ-HFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQH 445
           H SP    H     HAP  H         H  H E H    +   +     H G H S H
Sbjct: 497 HHSPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHH 556


>AF106579-5|AAC78198.1|  174|Caenorhabditis elegans Hypothetical
           protein F54E2.2 protein.
          Length = 174

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 330 AWCTTGACCTGLKCWTTG 277
           +WCTT   C G KC  TG
Sbjct: 150 SWCTTDQDCKGKKCCPTG 167


>U53154-11|AAC25848.1|  390|Caenorhabditis elegans Hypothetical
           protein C33G8.2 protein.
          Length = 390

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -3

Query: 467 RHHHHGFRVGTCDRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQR 327
           RH HHG R G   R  G  RRN     S   D   D+  R+Q+  ++
Sbjct: 85  RHGHHG-RHGM-GRHGGHGRRNKSGSDSDSSDSSEDKKKRKQMRDKK 129


>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
          Length = 1666

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
 Frame = +2

Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRG----NSSYIHASPVVQHFSPVQHAPV-VHH 328
           P  E    S +  + FDS       R+P      ++S +  S V    SP+   P  +H+
Sbjct: 296 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 353

Query: 329 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 490
             + I + +  H+  H    +E    V       + SQH    DG  ++G ++ +
Sbjct: 354 LPVLIVMNNDGHLSTHRITLHEGVTGVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 408


>AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical
           protein W03F11.6e protein.
          Length = 1039

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
 Frame = +2

Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRG----NSSYIHASPVVQHFSPVQHAPV-VHH 328
           P  E    S +  + FDS       R+P      ++S +  S V    SP+   P  +H+
Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351

Query: 329 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 490
             + I + +  H+  H    +E    V       + SQH    DG  ++G ++ +
Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406


>AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical
           protein W03F11.6d protein.
          Length = 1184

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
 Frame = +2

Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRG----NSSYIHASPVVQHFSPVQHAPV-VHH 328
           P  E    S +  + FDS       R+P      ++S +  S V    SP+   P  +H+
Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351

Query: 329 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 490
             + I + +  H+  H    +E    V       + SQH    DG  ++G ++ +
Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406


>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
           protein W03F11.6c protein.
          Length = 1419

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
 Frame = +2

Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRG----NSSYIHASPVVQHFSPVQHAPV-VHH 328
           P  E    S +  + FDS       R+P      ++S +  S V    SP+   P  +H+
Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351

Query: 329 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 490
             + I + +  H+  H    +E    V       + SQH    DG  ++G ++ +
Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406


>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
           protein W03F11.6a protein.
          Length = 1658

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
 Frame = +2

Query: 164 PSIESCCSSTDSRSPFDSTCRSYCSRRPRG----NSSYIHASPVVQHFSPVQHAPV-VHH 328
           P  E    S +  + FDS       R+P      ++S +  S V    SP+   P  +H+
Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351

Query: 329 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 490
             + I + +  H+  H    +E    V       + SQH    DG  ++G ++ +
Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406


>AC006714-6|AAN84810.2|  339|Caenorhabditis elegans Hypothetical
           protein Y119D3B.12a protein.
          Length = 339

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
 Frame = -3

Query: 491 GVESIRLSRHHHHGFRVGTC--DRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGAR 318
           G +  R +  HHH  R      D R  D R   R H   +   R DR   R   S+R  R
Sbjct: 271 GADRKRSTEQHHHSHRSSRDHRDHRHRDHRGEHREHREHKEHRRDDR--HRSERSERSER 328

Query: 317 LE 312
            E
Sbjct: 329 SE 330


>Z81464-7|CAB03857.2|  338|Caenorhabditis elegans Hypothetical
           protein C08E8.2 protein.
          Length = 338

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
 Frame = -3

Query: 395 THTSREHDLRHDRSVRRQLESQRGARLEH--VAQG*SVGLLAKHVYTKN 255
           TH+S  HD RH  ++   LE Q   R+ H  ++ G +V +LAK++Y  N
Sbjct: 139 THSSIRHDCRHFFNL--VLEHQGDGRILHLKISTG-TVKVLAKNLYFPN 184


>U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical
           protein F27C1.11 protein.
          Length = 1037

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
 Frame = +2

Query: 104 VFPKHRSP*RAFS-----SSNGTLYPSIE--SCCSSTDSRSPFDSTCRSYCSRRPRGN 256
           + PK  +P  A+S     SS G   P+    S  +S + R P  S    Y SRRP+ N
Sbjct: 145 ILPKRYAPREAYSISEKKSSTGGSDPATSGNSSGNSIEKRQPLPSINNRYVSRRPQEN 202


>U64835-5|AAG24196.1|  592|Caenorhabditis elegans Hypothetical
           protein T09D3.3 protein.
          Length = 592

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 17/64 (26%), Positives = 28/64 (43%)
 Frame = +3

Query: 345 PSNTPIMSKIMLPRSMSSHIPSRIPTPAITSPNTKPVMVMS*KANTLYSSLMVPSQGRIH 524
           P N  I  ++ +  +  + +P  IP P +  P  + VM ++ K N LY     P +    
Sbjct: 201 PPNLQISPQMHINPNFPTLVPLPIPQPVVLEPTKEEVMKIASKKN-LYGMPRFPIEPHRS 259

Query: 525 S*PP 536
             PP
Sbjct: 260 PSPP 263


>AL032657-14|CAC42375.2|  190|Caenorhabditis elegans Hypothetical
           protein Y47H9C.15 protein.
          Length = 190

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 406 RRGSPHRRSQVPTRNP*W*CRERRILSTPA*WFHRKVEYTADHHNGFN 549
           R+G+  +  +  T+N     RER+ +  P  W H K   T+   NGF+
Sbjct: 47  RQGAKEKFEEEATKNK---ARERKWVEEPIFWNHHKKFLTSLQKNGFD 91


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,999,131
Number of Sequences: 27780
Number of extensions: 372419
Number of successful extensions: 1360
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1343
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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