BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0900 (363 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_02_0967 - 24916352-24916402,24916662-24916717,24917602-249176... 27 3.4 >12_02_0967 - 24916352-24916402,24916662-24916717,24917602-24917685, 24917751-24918251,24918520-24919207 Length = 459 Score = 27.5 bits (58), Expect = 3.4 Identities = 11/25 (44%), Positives = 17/25 (68%), Gaps = 2/25 (8%) Frame = -3 Query: 250 FVEVLYNFFYTN--LRQ*FFYHIYE 182 ++E+ Y + YT LRQ F+Y +YE Sbjct: 205 YLEIFYQYRYTKYPLRQMFYYELYE 229 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 6,165,495 Number of Sequences: 37544 Number of extensions: 86142 Number of successful extensions: 120 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 120 length of database: 14,793,348 effective HSP length: 73 effective length of database: 12,052,636 effective search space used: 566473892 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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