BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0900 (363 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT022683-1|AAY55099.1| 217|Drosophila melanogaster IP07660p pro... 28 4.2 AE014297-3284|AAF56105.1| 211|Drosophila melanogaster CG13829-P... 28 4.2 >BT022683-1|AAY55099.1| 217|Drosophila melanogaster IP07660p protein. Length = 217 Score = 27.9 bits (59), Expect = 4.2 Identities = 12/35 (34%), Positives = 23/35 (65%) Frame = -2 Query: 323 IKFSVLRAYG*MLMDIIQTIFSLIVR*SFIQFFLY 219 +KF VL++Y + DII TI +++ + + F++Y Sbjct: 166 LKFVVLKSYAHINADIISTICTVVAVHAAVGFYIY 200 >AE014297-3284|AAF56105.1| 211|Drosophila melanogaster CG13829-PA protein. Length = 211 Score = 27.9 bits (59), Expect = 4.2 Identities = 12/35 (34%), Positives = 23/35 (65%) Frame = -2 Query: 323 IKFSVLRAYG*MLMDIIQTIFSLIVR*SFIQFFLY 219 +KF VL++Y + DII TI +++ + + F++Y Sbjct: 160 LKFVVLKSYAHINADIISTICTVVAVHAAVGFYIY 194 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,374,025 Number of Sequences: 53049 Number of extensions: 172479 Number of successful extensions: 188 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 188 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 188 length of database: 24,988,368 effective HSP length: 76 effective length of database: 20,956,644 effective search space used: 922092336 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -