Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0900
         (363 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   1.1  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   5.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   5.9  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 139 LILFGENPLWHIQIIHKCDKKIIVL 213
           L  +G+N +  ++IIH   KK+I L
Sbjct: 237 LTKYGKNQIKLLEIIHGLTKKVIQL 261


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
          phosphatase protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = +1

Query: 28 YVYYDLFPIK 57
          Y+YYD +P++
Sbjct: 28 YLYYDFYPLE 37


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
          precursor protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = +1

Query: 28 YVYYDLFPIK 57
          Y+YYD +P++
Sbjct: 43 YLYYDFYPLE 52


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,477
Number of Sequences: 438
Number of extensions: 1533
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8556345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)