Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0896
         (230 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   3.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   3.9  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           19   5.2  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    19   5.2  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    19   6.8  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    19   6.8  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    19   6.8  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    19   9.0  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    19   9.0  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    19   9.0  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 3.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 172 LSGNIRPFPPPLASPNSH 119
           L G++    PP   PNSH
Sbjct: 255 LYGSVVIRQPPAKDPNSH 272


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 19.8 bits (39), Expect = 3.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 172 LSGNIRPFPPPLASPNSH 119
           L G++    PP   PNSH
Sbjct: 255 LYGSVVIRQPPAKDPNSH 272


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 19.4 bits (38), Expect = 5.2
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 160 IRPFPPPLASP 128
           + P P PLASP
Sbjct: 88  VAPEPAPLASP 98


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 19.4 bits (38), Expect = 5.2
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 90  LHFKYGSCDVTPLFKTLTQ 34
           +  +Y   D+ P+F +LTQ
Sbjct: 198 VELEYLKTDLIPMFLSLTQ 216


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 19.0 bits (37), Expect = 6.8
 Identities = 5/7 (71%), Positives = 7/7 (100%)
 Frame = -2

Query: 160 IRPFPPP 140
           ++PFPPP
Sbjct: 203 LQPFPPP 209


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 19.0 bits (37), Expect = 6.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 178 NWLSGNIRPFPPPLASPNSHPRR 110
           +W+S    PF   +  PN  PRR
Sbjct: 140 DWMS----PFDRVVCGPNGCPRR 158


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 19.0 bits (37), Expect = 6.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 178 NWLSGNIRPFPPPLASPNSHPRR 110
           +W+S    PF   +  PN  PRR
Sbjct: 199 DWMS----PFDRVVCGPNGCPRR 217


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
          protein 2 protein.
          Length = 122

 Score = 18.6 bits (36), Expect = 9.0
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 25 FNNLCQCFKKRG 60
          F+N  QC  K+G
Sbjct: 40 FDNYLQCLLKKG 51


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 18.6 bits (36), Expect = 9.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 123 EFGDASGGGKG 155
           E  D SGGG+G
Sbjct: 86  ENNDDSGGGRG 96


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
          protein protein.
          Length = 122

 Score = 18.6 bits (36), Expect = 9.0
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 25 FNNLCQCFKKRG 60
          F+N  QC  K+G
Sbjct: 40 FDNYLQCLLKKG 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,357
Number of Sequences: 336
Number of extensions: 993
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used:  3213870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)