BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0896
(230 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D17550-1|BAA04488.1| 1235|Drosophila melanogaster tyrosine kinas... 26 6.1
BT030297-1|ABN49436.1| 448|Drosophila melanogaster IP18711p pro... 26 6.1
AE014297-657|AAF54154.3| 1859|Drosophila melanogaster CG31187-PA... 26 6.1
AE014296-868|AAF47916.2| 1233|Drosophila melanogaster CG7525-PA ... 26 6.1
BT010230-1|AAQ23548.1| 1186|Drosophila melanogaster RE61780p pro... 26 8.1
AE014297-1377|AAF54698.1| 1354|Drosophila melanogaster CG17360-P... 26 8.1
>D17550-1|BAA04488.1| 1235|Drosophila melanogaster tyrosine kinase
protein.
Length = 1235
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 159 YVLFLRHWHRQTHIREGYAQ 100
Y L R WH++ H+R +AQ
Sbjct: 1166 YNLMSRCWHKEPHMRPSFAQ 1185
>BT030297-1|ABN49436.1| 448|Drosophila melanogaster IP18711p
protein.
Length = 448
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Frame = +2
Query: 101 CA*PSRM*VWRCQWRRKRTYVPAQPILEVAPKIDDS----VKPTEV 226
C R+ WRC W R +V +P + VA I + V PT V
Sbjct: 126 CGSVLRLQDWRCLWCRATVHVACRPQMAVACPIGPAKLSVVPPTSV 171
>AE014297-657|AAF54154.3| 1859|Drosophila melanogaster CG31187-PA
protein.
Length = 1859
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Frame = +2
Query: 101 CA*PSRM*VWRCQWRRKRTYVPAQPILEVAPKIDDS----VKPTEV 226
C R+ WRC W R +V +P + VA I + V PT V
Sbjct: 206 CGSVLRLQDWRCLWCRATVHVACRPQMAVACPIGPAKLSVVPPTSV 251
>AE014296-868|AAF47916.2| 1233|Drosophila melanogaster CG7525-PA
protein.
Length = 1233
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 159 YVLFLRHWHRQTHIREGYAQ 100
Y L R WH++ H+R +AQ
Sbjct: 1164 YNLMSRCWHKEPHMRPSFAQ 1183
>BT010230-1|AAQ23548.1| 1186|Drosophila melanogaster RE61780p
protein.
Length = 1186
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 163 NIRPFPPPLASPNSH 119
N+RP P PL PNS+
Sbjct: 58 NVRPMPLPLVDPNSN 72
>AE014297-1377|AAF54698.1| 1354|Drosophila melanogaster CG17360-PA
protein.
Length = 1354
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 163 NIRPFPPPLASPNSH 119
N+RP P PL PNS+
Sbjct: 58 NVRPMPLPLVDPNSN 72
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,254,777
Number of Sequences: 53049
Number of extensions: 191246
Number of successful extensions: 731
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 24,988,368
effective HSP length: 56
effective length of database: 22,017,624
effective search space used: 440352480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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