Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0895
         (664 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    22   3.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   6.8  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   9.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.0  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   9.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.0  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 209 WKQARGKFYPQLSYLK 256
           WKQ   K+ P+ +Y+K
Sbjct: 100 WKQLEAKYDPEHTYVK 115


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = -1

Query: 121 IVQFYELIWSFCFTF 77
           ++QF  +++SFC+ +
Sbjct: 262 LIQFNTIVFSFCYCY 276


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 266 VFTFSDTTTAGRIFLWPVSI 207
           V+  S T + GR+ +WP ++
Sbjct: 314 VYDASITASLGRVPIWPYTL 333


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 266 VFTFSDTTTAGRIFLWPVSI 207
           V+  S T + GR+ +WP ++
Sbjct: 321 VYDASITASLGRVPIWPYTL 340


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = +2

Query: 155 SRGKDAHMIH 184
           S+G+D HM+H
Sbjct: 12  SKGQDKHMVH 21


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 505 PNVCDRLNEEQNGCGKKWF 561
           P +C  LN+ QN   +K F
Sbjct: 339 PEICTLLNDPQNAKTQKAF 357


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +2

Query: 542 AAARNGFHTW*SWPSG 589
           AA   GFH W   P G
Sbjct: 58  AAVGKGFHPWKKSPQG 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,303
Number of Sequences: 336
Number of extensions: 3868
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)