BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0895 (664 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC17G8.03c |dpb3||DNA polymerase epsilon subunit Dpb3|Schizosa... 28 1.0 SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 28 1.0 SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |... 27 1.8 SPBC32F12.05c |cwf12||complexed with Cdc5 protein Cwf12 |Schizos... 27 3.2 SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 26 5.6 SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 26 5.6 SPCC1235.15 |dga1|SPCC548.01|diacylglycerol O-acyltransferase |S... 25 7.4 SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce... 25 7.4 SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 25 9.7 SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit Swd2|Schizosa... 25 9.7 >SPAC17G8.03c |dpb3||DNA polymerase epsilon subunit Dpb3|Schizosaccharomyces pombe|chr 1|||Manual Length = 199 Score = 28.3 bits (60), Expect = 1.0 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 5/51 (9%) Frame = +2 Query: 17 NAKEFD---SVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNE-LP-KKIK 154 + ++FD +++ P A +KAERKTKRP + NE +P KK+K Sbjct: 88 SVEQFDFLQDIVEKVPDAPPIKAERKTKRPRARRAANEGEHNESVPAKKVK 138 >SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharomyces pombe|chr 2|||Manual Length = 854 Score = 28.3 bits (60), Expect = 1.0 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Frame = -1 Query: 340 ERSSRIRYWAVCGRPFSSLASQLVACSLFQIRQ--LRVEFSSGLFPFHELDKF 188 E +R W + R + + S+L C+ F L V FSSGLF +EL F Sbjct: 235 ENKTRTHIWLIKERHYFNQNSKL-RCAAFHPTSNLLVVGFSSGLFGIYELPSF 286 >SPAC25G10.04c |rec10|rec20|meiotic recombination protein Rec10 |Schizosaccharomyces pombe|chr 1|||Manual Length = 791 Score = 27.5 bits (58), Expect = 1.8 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +1 Query: 226 KILPAVVVSEKVNTPRAVMQETKKAFRKLPN 318 K+LPA++VS K+ + + K+ KLPN Sbjct: 339 KLLPAIIVSPKLTLRNRSIIQIKEGESKLPN 369 >SPBC32F12.05c |cwf12||complexed with Cdc5 protein Cwf12 |Schizosaccharomyces pombe|chr 2|||Manual Length = 217 Score = 26.6 bits (56), Expect = 3.2 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +2 Query: 20 AKEFDSVLKLYPQAIKLKAERKTKRPDELIKLDNWYQNELPKKIKSRGKDAHMIHEE 190 A+E V +L+ + ER+ K+ + +LD WY +P +S +D EE Sbjct: 113 ARELPGVKELFEADMSFIPERQRKQEMQKRRLDAWYFGYIPPAQESLLEDFEAKIEE 169 >SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 781 Score = 25.8 bits (54), Expect = 5.6 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = +1 Query: 529 EEQNGCGKKWFPHMVELALWTHNIVSDLQPQLLGKEPNN 645 + + G + W ++ L LW + VSD + ++L EP N Sbjct: 681 QNETGLHRPWCLYVSTLILWAYGYVSDGRCEML--EPGN 717 >SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 1336 Score = 25.8 bits (54), Expect = 5.6 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = -1 Query: 640 WALSLITVVVSPIQCCASR 584 W L+ + V VSPI C SR Sbjct: 921 WRLAAVLVAVSPILCLTSR 939 >SPCC1235.15 |dga1|SPCC548.01|diacylglycerol O-acyltransferase |Schizosaccharomyces pombe|chr 3|||Manual Length = 345 Score = 25.4 bits (53), Expect = 7.4 Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 3/44 (6%) Frame = +2 Query: 134 ELPKKIKSRGKDAHMIHEELVQLMK--WKQARGKFYP-QLSYLK 256 ++PKK ++ + +HEE ++ ++ W + + F P ++S LK Sbjct: 299 DVPKKSHPTNQEIYEVHEEYIRRLEGLWNKYKDVFLPNRISELK 342 >SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces pombe|chr 3|||Manual Length = 520 Score = 25.4 bits (53), Expect = 7.4 Identities = 8/20 (40%), Positives = 13/20 (65%) Frame = +1 Query: 562 PHMVELALWTHNIVSDLQPQ 621 PH +L LW +N+V + P+ Sbjct: 436 PHAGDLGLWFYNVVDGILPE 455 >SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosaccharomyces pombe|chr 3|||Manual Length = 732 Score = 25.0 bits (52), Expect = 9.7 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = +2 Query: 71 KAERKTKRPDELIKLDNWYQNELPKKIKSRGKDAHMIHEELVQ 199 + ER + P E N N L SRG+ AH+ EE V+ Sbjct: 361 RRERTSSTPSEQSTSVNETANSLSNLHLSRGEIAHLRQEEYVR 403 >SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit Swd2|Schizosaccharomyces pombe|chr 2|||Manual Length = 357 Score = 25.0 bits (52), Expect = 9.7 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 4/90 (4%) Frame = -1 Query: 382 TLMLWPF--PRL*DCLERSSRI-RYWAVCGRPFSSLASQLVACSLFQIRQLRVEFSSGLF 212 T+ LW P L SS + + G F+S++ + SL+ I+ Sbjct: 135 TIRLWDLRSPNCQGLLNVSSPVVAAFDATGLIFASVSERKYKISLYNIKSFDAR------ 188 Query: 211 PFHELDKFFVD-HVRIFTPRFDLLGKFILI 125 PF ++ F+ HVRI F GK++L+ Sbjct: 189 PFQDIPLTFLPPHVRIANVEFSTDGKYLLL 218 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,965,804 Number of Sequences: 5004 Number of extensions: 64265 Number of successful extensions: 162 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 161 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 162 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 301829700 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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