Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0894
         (638 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   1.6  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   3.8  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   5.0  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   5.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   5.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   5.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   6.6  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   6.6  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   6.6  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   6.6  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   6.6  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 546 LLFNRCFCVFSTWV 505
           L+FN C  VFS WV
Sbjct: 66  LIFNTCGEVFSAWV 79


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 275 EIDLTVSADDKPPPL 319
           EI++ V+ +D PPP+
Sbjct: 143 EIEVKVTGNDAPPPI 157


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -1

Query: 161 HAVLSVFIVVKNTFYSTKY 105
           H+  + ++  K+ FY TKY
Sbjct: 375 HSTNAAYLFQKDKFYDTKY 393


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 473 HQVHFQHIHQS 441
           H++  QH+HQS
Sbjct: 107 HEIKLQHLHQS 117


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -3

Query: 561 SFVFLLLFNRCFCVFSTWV 505
           +  F ++ N CFC  + W+
Sbjct: 90  ALAFQVILNSCFCDPAKWI 108


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -3

Query: 561 SFVFLLLFNRCFCVFSTWV 505
           +  F ++ N CFC  + W+
Sbjct: 90  ALAFQVILNSCFCDPAKWI 108


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 148 QSSLS*KIPSTALSTRLYIAVCNDMYK 68
           Q+ LS  +    LSTRL+     D+YK
Sbjct: 262 QTGLSPYLRFGCLSTRLFYYQLTDLYK 288


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 113 CCRRYFLRQ*RLIIPH 160
           CCR  FLR+  + + H
Sbjct: 83  CCRESFLRERTITLTH 98


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 567 FFSFVFLLLFNRCFCVF 517
           ++SF FL++   C C+F
Sbjct: 323 YWSFGFLIVRTVCLCLF 339


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 567 FFSFVFLLLFNRCFCVF 517
           ++SF FL++   C C+F
Sbjct: 323 YWSFGFLIVRTVCLCLF 339


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 473 ELKDSPRTFEATHVLKTQKHRLKRRRKTKEKNVM*PLNQY 592
           +LK S  T EA  +L+++    +R+R+   K     LN+Y
Sbjct: 211 QLKQS--TCEAVMILRSRFLDARRKRRNFSKQASEILNEY 248


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,383
Number of Sequences: 336
Number of extensions: 3082
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)