Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0894
         (638 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70855-5|AAB09160.2|  886|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U55857-10|AAA98035.2|  895|Caenorhabditis elegans Hypothetical p...    29   3.7  
U23519-12|AAK31505.3| 1021|Caenorhabditis elegans Hypothetical p...    29   3.7  
AF099001-6|AAC68738.2|  661|Caenorhabditis elegans Lateral signa...    29   3.7  
AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical ...    29   3.7  
AC093703-5|AAL00865.1|  725|Caenorhabditis elegans Hypothetical ...    29   3.7  
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical...    28   4.9  
AF098985-7|AAC67417.1|  306|Caenorhabditis elegans Hypothetical ...    28   4.9  
Z78540-4|CAB01734.2|  624|Caenorhabditis elegans Hypothetical pr...    28   6.5  
U97592-4|AAB52872.1|  450|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AF100306-10|AAC68926.1|  798|Caenorhabditis elegans Hypothetical...    27   8.6  

>U70855-5|AAB09160.2|  886|Caenorhabditis elegans Hypothetical
           protein K08F11.2 protein.
          Length = 886

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 212 GHFLQNLQLEH*LKSMFHAVLSVF 141
           G  LQN++LEH L +M H ++ +F
Sbjct: 587 GPILQNVKLEHYLPAMLHLIVGLF 610


>U55857-10|AAA98035.2|  895|Caenorhabditis elegans Hypothetical
           protein K08D10.1 protein.
          Length = 895

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 212 GHFLQNLQLEH*LKSMFHAVLSVF 141
           G  LQN++LEH L +M H ++ +F
Sbjct: 587 GPILQNVKLEHYLPAMLHLIVGLF 610


>U23519-12|AAK31505.3| 1021|Caenorhabditis elegans Hypothetical
           protein F26G1.1 protein.
          Length = 1021

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -3

Query: 573 ITFFSFVFLLLFNRCFCVFSTWVASK 496
           +T F+FV LLLF  C  VFS ++ +K
Sbjct: 1   MTVFTFVVLLLFYFCNTVFSYYIQTK 26


>AF099001-6|AAC68738.2|  661|Caenorhabditis elegans Lateral
           signaling target protein 2 protein.
          Length = 661

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 20/65 (30%), Positives = 33/65 (50%)
 Frame = +2

Query: 371 DVISTPDFGLIKEMLEKVSEVNLHSDECVENAPDELKDSPRTFEATHVLKTQKHRLKRRR 550
           + I  PD   ++E  E  SEV+ H DE    + DE+ D     +A+ VL+ +  + K  R
Sbjct: 394 ETIEEPDNVDMEESSE--SEVDTHIDETRNESDDEITDD---VQASDVLQVETKKCKSSR 448

Query: 551 KTKEK 565
             ++K
Sbjct: 449 LLEQK 453


>AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical
            protein T05C3.2 protein.
          Length = 1733

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = +2

Query: 482  DSPRTFEATHVLKTQKHRLKRRRKTKEKNVM*PLNQYLKWENQENALLKFES 637
            DS   F+A  V KTQK + + R+  K+K+VM  +N+ +   +  N ++  ES
Sbjct: 1517 DSLLVFDA--VEKTQKIKFRPRQSKKQKDVM--INKIIAMPSNSNQIIVVES 1564


>AC093703-5|AAL00865.1|  725|Caenorhabditis elegans Hypothetical
           protein Y20F4.5 protein.
          Length = 725

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 212 GHFLQNLQLEH*LKSMFHAVLSVF 141
           G  LQN++LEH L +M H ++ +F
Sbjct: 439 GPILQNVKLEHYLPAMLHLIVGLF 462


>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
           protein Y26D4A.9 protein.
          Length = 1435

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 440 HSDECVENAPDEL-KDSPRTFEATHVLKTQKHR 535
           H ++C+ N P ++ K S    E + + KTQKHR
Sbjct: 360 HFEDCMSNDPIQMIKPSESHIEFSSLQKTQKHR 392


>AF098985-7|AAC67417.1|  306|Caenorhabditis elegans Hypothetical
           protein C08G5.6 protein.
          Length = 306

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
 Frame = -3

Query: 234 LHAYWSTWTFFTKFTVGTLIKIYVSCGI---ISLHCRKKYLLQH*VPDYILQFAMICTKS 64
           LHA    ++  +    G +   ++  G+   ++L+      L+H  P Y L +A++    
Sbjct: 59  LHACIRQFSIESLVFSGVIFSFFLLSGVGITVALYVAHTVALRHVKPGYFLPYAVMKAVR 118

Query: 63  IITILFV*F-LLKPQNMIKT 7
           I+T+  V F +L    +IKT
Sbjct: 119 IVTLAIVSFAILFSPTLIKT 138


>Z78540-4|CAB01734.2|  624|Caenorhabditis elegans Hypothetical
           protein C33G3.6 protein.
          Length = 624

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/52 (25%), Positives = 27/52 (51%)
 Frame = +2

Query: 416 EKVSEVNLHSDECVENAPDELKDSPRTFEATHVLKTQKHRLKRRRKTKEKNV 571
           EK +    +    ++  PDE+K++  T    +V K +    KR+R ++E+ +
Sbjct: 207 EKPTSAETNEGFNIDEKPDEMKNNYETDSVENVQKGETEEEKRKRLSEEERL 258


>U97592-4|AAB52872.1|  450|Caenorhabditis elegans Hypothetical
           protein C14A11.5 protein.
          Length = 450

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 16/72 (22%), Positives = 30/72 (41%)
 Frame = +2

Query: 401 IKEMLEKVSEVNLHSDECVENAPDELKDSPRTFEATHVLKTQKHRLKRRRKTKEKNVM*P 580
           +K +L+    +     E +  + ++LK S        + KT     K+R K  E+     
Sbjct: 207 LKNVLDDAEVLKTFRYEEISESLEKLKCSAANMGIKQIEKTMSKGKKKRAKKAERKASEV 266

Query: 581 LNQYLKWENQEN 616
            N + KW  Q++
Sbjct: 267 ANAHKKWLEQKS 278


>AF100306-10|AAC68926.1|  798|Caenorhabditis elegans Hypothetical
           protein T24C4.7 protein.
          Length = 798

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = +2

Query: 512 VLKTQKHRLKRRRKTKE 562
           VL+TQKHRL R R  KE
Sbjct: 198 VLQTQKHRLPRERMLKE 214


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,850,619
Number of Sequences: 27780
Number of extensions: 276653
Number of successful extensions: 817
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)