Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0893
         (556 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.8  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   3.1  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   3.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   4.1  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   4.1  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   4.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.5  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.5  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   9.5  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +3

Query: 210 CIGKTLQRHPFSGLV-LRQVSRCTLLSGFRLPWP 308
           CI +  +R    G + +  +S C++L G    WP
Sbjct: 60  CINQRCERRHIKGAIPVVSLSTCSMLCGSTQLWP 93


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 73  PRSAPTEAPSGLTPR 117
           PRS+P E  S L+P+
Sbjct: 154 PRSSPAETASSLSPQ 168


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 73  PRSAPTEAPSGLTPR 117
           PRS+P E  S L+P+
Sbjct: 145 PRSSPAETASSLSPQ 159


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 518 RPQTILKTFKWVR 480
           +PQ +L T+KW++
Sbjct: 189 QPQPVLPTYKWMQ 201


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 518 RPQTILKTFKWVR 480
           +PQ +L T+KW++
Sbjct: 189 QPQPVLPTYKWMQ 201


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 518 RPQTILKTFKWVR 480
           +PQ +L T+KW++
Sbjct: 189 QPQPVLPTYKWMQ 201


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 406 FCLPKLAHLAPSSDLRLHRSSKAGVLTHLKVL 501
           F +P+L  L  SS +   +SSK    +H  ++
Sbjct: 139 FWVPQLGSLFRSSRMCFFKSSKKPAFSHFLIV 170


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 406 FCLPKLAHLAPSSDLRLHRSSKAGVLTHLKVL 501
           F +P+L  L  SS +   +SSK    +H  ++
Sbjct: 139 FWVPQLGSLFRSSRMCFFKSSKKPAFSHFLIV 170


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 406 FCLPKLAHLAPSSDLRLHRSSKAGVLTHLKVL 501
           F +P+L  L  SS +   +SSK    +H  ++
Sbjct: 139 FWVPQLGSLFRSSRMCFFKSSKKPAFSHFLIV 170


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 406 FCLPKLAHLAPSSDLRLHRSSKAGVLTHLKVL 501
           F +P+L  L  SS +   +SSK    +H  ++
Sbjct: 139 FWVPQLGSLFRSSRMCFFKSSKKPAFSHFLIV 170


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 486 PFKSFENSLRSFWPQCL*LF 545
           PF+S + SL    P CL  F
Sbjct: 241 PFESLKKSLNFRTPSCLETF 260


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory
          receptor candidate 41 protein.
          Length = 398

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +2

Query: 47 PRWSICY 67
          PRW ICY
Sbjct: 38 PRWYICY 44


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 5/22 (22%), Positives = 13/22 (59%)
 Frame = -1

Query: 415 VSRTGAVG*TKRSVKAPKKRSW 350
           ++    V  T + ++ PK+++W
Sbjct: 88  LNNNNVVSSTNQEIRGPKRKTW 109



 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 286 ADSDFHGHRPAVMSDQRLS 342
           A    H HRPA+   +R++
Sbjct: 299 AGGPLHDHRPALAQQRRVA 317


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,337
Number of Sequences: 336
Number of extensions: 3069
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)