Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0893
(556 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043433-1|AAC05656.1| 231|Anopheles gambiae putative pupal-spe... 25 1.7
AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 24 2.9
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 24 2.9
AY028782-1|AAK32956.1| 501|Anopheles gambiae cytochrome P450 pr... 24 3.9
AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 24 3.9
AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium ch... 24 3.9
M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles ... 23 5.1
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 23 6.7
DQ219482-1|ABB29886.1| 545|Anopheles gambiae cryptochrome 1 pro... 23 8.9
AY496420-1|AAS80137.1| 447|Anopheles gambiae bacteria responsiv... 23 8.9
AY028783-1|AAK32957.1| 499|Anopheles gambiae cytochrome P450 pr... 23 8.9
>AF043433-1|AAC05656.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 25.0 bits (52), Expect = 1.7
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 68 YHQDLHRRRLQAGSRPDPSALSVAH-VLLVTA**YQIKNLASHVPVTVVYRQNASAPSI 241
YH D H A RP+PSA+ +A V V A + + A H PV Q+ A I
Sbjct: 128 YHAD-HHTGFNAVVRPEPSAVKIAQPVHKVIAQPVHVSSYA-HAPVAHATVQHHHAAPI 184
>AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP
protein.
Length = 151
Score = 24.2 bits (50), Expect = 2.9
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +3
Query: 222 TLQRHPFSGLVLRQVSRCTLLSGFRLPWPPSCCHERPTPFMV 347
T+ P G++ LL G P PP RP P MV
Sbjct: 82 TMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPPMMV 123
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 24.2 bits (50), Expect = 2.9
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +2
Query: 17 ETLLHVSPPGPRWSICYYHQDLHRRRLQAGSRPDPSALSVAHVLLVTA 160
+++ ++S P WSI Y+ +D+ +QA + + +LVTA
Sbjct: 210 QSVRNLSRPITGWSIKYFSKDIFEVMMQAAVDTEVTTSEDLMRILVTA 257
>AY028782-1|AAK32956.1| 501|Anopheles gambiae cytochrome P450
protein.
Length = 501
Score = 23.8 bits (49), Expect = 3.9
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +3
Query: 210 CIGKTLQRHPFSGLVLRQVSRCTLLSGFRLPWP 308
CI ++L+++P ++RQVS+ + G + +P
Sbjct: 359 CINESLRKYPPGANLIRQVSQDYRVPGTDVTFP 391
>AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel
protein.
Length = 574
Score = 23.8 bits (49), Expect = 3.9
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = +2
Query: 203 TVVYRQNASAPSIF--RAGSSAG 265
TV +NA+APSIF GSS+G
Sbjct: 218 TVYMFRNATAPSIFPTEVGSSSG 240
>AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium
channel protein.
Length = 572
Score = 23.8 bits (49), Expect = 3.9
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = +2
Query: 203 TVVYRQNASAPSIF--RAGSSAG 265
TV +NA+APSIF GSS+G
Sbjct: 218 TVYMFRNATAPSIFPTEVGSSSG 240
>M93691-1|AAA29366.1| 574|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 574
Score = 23.4 bits (48), Expect = 5.1
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 16 RNPSPRQSSRASLEYLLLPPRSAPTEAPSG 105
RN ++ RAS ++PPRS A G
Sbjct: 225 RNQHEQEQPRASTSRAVMPPRSEALTAVRG 254
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 23.0 bits (47), Expect = 6.7
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1
Query: 295 RNPLRSVQRLTCRR 254
R+P+RS+ + CRR
Sbjct: 1117 RDPIRSIDEMICRR 1130
>DQ219482-1|ABB29886.1| 545|Anopheles gambiae cryptochrome 1
protein.
Length = 545
Score = 22.6 bits (46), Expect = 8.9
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 332 WSLMTAGRWPWKSESAKE 279
WS+ AG W W S SA E
Sbjct: 410 WSVC-AGNWMWVSSSAFE 426
>AY496420-1|AAS80137.1| 447|Anopheles gambiae bacteria responsive
protein 1 protein.
Length = 447
Score = 22.6 bits (46), Expect = 8.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 15 AKPFSTSVLQGLAGVFATTTKI 80
A PF T ++ G AGV A T ++
Sbjct: 58 ALPFCTHLMYGYAGVNAETYRL 79
>AY028783-1|AAK32957.1| 499|Anopheles gambiae cytochrome P450
protein.
Length = 499
Score = 22.6 bits (46), Expect = 8.9
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +3
Query: 210 CIGKTLQRHPFSGLVLRQVS 269
CI +TL++HP + ++R V+
Sbjct: 353 CINETLRKHPLAINLIRVVT 372
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,093
Number of Sequences: 2352
Number of extensions: 13109
Number of successful extensions: 71
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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