Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0893
         (556 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.39 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   2.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   4.8  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   6.3  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.4 bits (53), Expect = 0.39
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 463  NDEAGDLMTVPSGPILVSRTGA 398
            ND+  D +T P  P+ +SR G+
Sbjct: 1387 NDDGSDRLTSPPTPLSISRAGS 1408


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 530 LGPKRPQTILKTFKWVR 480
           LG K  QT LKT  W R
Sbjct: 112 LGAKDYQTFLKTAAWAR 128


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +3

Query: 78  ICTDGGSKRAHAQTLLRSPSRTSYSLRLNDTKLKI*HH 191
           +C    S+       L SP R   + R+N TKLK  HH
Sbjct: 120 LCEVPESRDGPPSVSLSSPPREPGTPRINFTKLKR-HH 156


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 218 AYTLPLPARVMLNF 177
           ++ +PLP RV+ NF
Sbjct: 222 SFCIPLPVRVLPNF 235


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,770
Number of Sequences: 438
Number of extensions: 3415
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)