Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0892
         (646 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81523-2|CAB04248.1|  928|Caenorhabditis elegans Hypothetical pr...    31   0.92 
Z81523-1|CAB04241.1|  944|Caenorhabditis elegans Hypothetical pr...    31   0.92 
Z92833-2|CAB07379.1|  891|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z82285-9|CAB05303.1|  513|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z82264-13|CAB05168.1|  513|Caenorhabditis elegans Hypothetical p...    28   4.9  
AL132952-25|CAB63388.1|  513|Caenorhabditis elegans Hypothetical...    28   4.9  
AL132846-9|CAB63368.1|  513|Caenorhabditis elegans Hypothetical ...    28   4.9  

>Z81523-2|CAB04248.1|  928|Caenorhabditis elegans Hypothetical
           protein F32H2.1b protein.
          Length = 928

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 14/45 (31%), Positives = 18/45 (40%)
 Frame = +1

Query: 238 GPGTQLPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASW 372
           G  T+      +YN L     +  W N  V +L  L   P F SW
Sbjct: 229 GSRTEWAVKSKWYNELNPKWNKEHWSNEEVEKLKYLRESPKFVSW 273


>Z81523-1|CAB04241.1|  944|Caenorhabditis elegans Hypothetical
           protein F32H2.1a protein.
          Length = 944

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 14/45 (31%), Positives = 18/45 (40%)
 Frame = +1

Query: 238 GPGTQLPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASW 372
           G  T+      +YN L     +  W N  V +L  L   P F SW
Sbjct: 229 GSRTEWAVKSKWYNELNPKWNKEHWSNEEVEKLKYLRESPKFVSW 273


>Z92833-2|CAB07379.1|  891|Caenorhabditis elegans Hypothetical
           protein F38A6.2 protein.
          Length = 891

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = -2

Query: 441 LPFAIQAAQLLGRAIGAGLFAITPAGE--RGMCCKAIKLGNARV 316
           L F+  +  L G++IGA L   T AGE   G   K +K G++RV
Sbjct: 761 LDFSSDSQYLRGQSIGAHLLFWTKAGEICDGTSVKDVKWGSSRV 804


>Z82285-9|CAB05303.1|  513|Caenorhabditis elegans Hypothetical
           protein T28F3.9 protein.
          Length = 513

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 247 TQLPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAH 354
           T +  +E YY  +  V+  +D +NPG   LN   +H
Sbjct: 470 TNIKMNEKYYEEMVTVIYHKDHKNPGY-HLNCTPSH 504


>Z82264-13|CAB05168.1|  513|Caenorhabditis elegans Hypothetical
           protein T28F3.9 protein.
          Length = 513

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 247 TQLPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAH 354
           T +  +E YY  +  V+  +D +NPG   LN   +H
Sbjct: 470 TNIKMNEKYYEEMVTVIYHKDHKNPGY-HLNCTPSH 504


>AL132952-25|CAB63388.1|  513|Caenorhabditis elegans Hypothetical
           protein Y51H4A.25a protein.
          Length = 513

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 247 TQLPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAH 354
           T +  +E YY  +  V+  +D +NPG   LN   +H
Sbjct: 470 TNIKLNEKYYEEMVTVIYHKDHKNPGY-HLNCTPSH 504


>AL132846-9|CAB63368.1|  513|Caenorhabditis elegans Hypothetical
           protein Y51H4A.25a protein.
          Length = 513

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 247 TQLPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAH 354
           T +  +E YY  +  V+  +D +NPG   LN   +H
Sbjct: 470 TNIKLNEKYYEEMVTVIYHKDHKNPGY-HLNCTPSH 504


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,799,547
Number of Sequences: 27780
Number of extensions: 309162
Number of successful extensions: 671
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)