BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0892 (646 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical pr... 31 0.92 Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical pr... 31 0.92 Z92833-2|CAB07379.1| 891|Caenorhabditis elegans Hypothetical pr... 29 3.7 Z82285-9|CAB05303.1| 513|Caenorhabditis elegans Hypothetical pr... 28 4.9 Z82264-13|CAB05168.1| 513|Caenorhabditis elegans Hypothetical p... 28 4.9 AL132952-25|CAB63388.1| 513|Caenorhabditis elegans Hypothetical... 28 4.9 AL132846-9|CAB63368.1| 513|Caenorhabditis elegans Hypothetical ... 28 4.9 >Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical protein F32H2.1b protein. Length = 928 Score = 30.7 bits (66), Expect = 0.92 Identities = 14/45 (31%), Positives = 18/45 (40%) Frame = +1 Query: 238 GPGTQLPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASW 372 G T+ +YN L + W N V +L L P F SW Sbjct: 229 GSRTEWAVKSKWYNELNPKWNKEHWSNEEVEKLKYLRESPKFVSW 273 >Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical protein F32H2.1a protein. Length = 944 Score = 30.7 bits (66), Expect = 0.92 Identities = 14/45 (31%), Positives = 18/45 (40%) Frame = +1 Query: 238 GPGTQLPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAHPPFASW 372 G T+ +YN L + W N V +L L P F SW Sbjct: 229 GSRTEWAVKSKWYNELNPKWNKEHWSNEEVEKLKYLRESPKFVSW 273 >Z92833-2|CAB07379.1| 891|Caenorhabditis elegans Hypothetical protein F38A6.2 protein. Length = 891 Score = 28.7 bits (61), Expect = 3.7 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%) Frame = -2 Query: 441 LPFAIQAAQLLGRAIGAGLFAITPAGE--RGMCCKAIKLGNARV 316 L F+ + L G++IGA L T AGE G K +K G++RV Sbjct: 761 LDFSSDSQYLRGQSIGAHLLFWTKAGEICDGTSVKDVKWGSSRV 804 >Z82285-9|CAB05303.1| 513|Caenorhabditis elegans Hypothetical protein T28F3.9 protein. Length = 513 Score = 28.3 bits (60), Expect = 4.9 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = +1 Query: 247 TQLPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAH 354 T + +E YY + V+ +D +NPG LN +H Sbjct: 470 TNIKMNEKYYEEMVTVIYHKDHKNPGY-HLNCTPSH 504 >Z82264-13|CAB05168.1| 513|Caenorhabditis elegans Hypothetical protein T28F3.9 protein. Length = 513 Score = 28.3 bits (60), Expect = 4.9 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = +1 Query: 247 TQLPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAH 354 T + +E YY + V+ +D +NPG LN +H Sbjct: 470 TNIKMNEKYYEEMVTVIYHKDHKNPGY-HLNCTPSH 504 >AL132952-25|CAB63388.1| 513|Caenorhabditis elegans Hypothetical protein Y51H4A.25a protein. Length = 513 Score = 28.3 bits (60), Expect = 4.9 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = +1 Query: 247 TQLPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAH 354 T + +E YY + V+ +D +NPG LN +H Sbjct: 470 TNIKLNEKYYEEMVTVIYHKDHKNPGY-HLNCTPSH 504 >AL132846-9|CAB63368.1| 513|Caenorhabditis elegans Hypothetical protein Y51H4A.25a protein. Length = 513 Score = 28.3 bits (60), Expect = 4.9 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = +1 Query: 247 TQLPYSESYYNSLAVVLQRRDWENPGVTQLNRLAAH 354 T + +E YY + V+ +D +NPG LN +H Sbjct: 470 TNIKLNEKYYEEMVTVIYHKDHKNPGY-HLNCTPSH 504 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,799,547 Number of Sequences: 27780 Number of extensions: 309162 Number of successful extensions: 671 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 664 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 671 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1423653030 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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