BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0891 (336 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 06_03_1055 - 27234824-27234838,27236087-27236125,27236322-272373... 31 0.31 07_03_0846 - 21983581-21986055 29 0.71 02_04_0276 + 21491150-21492761,21492891-21492947,21493817-214938... 29 0.93 08_02_1344 - 26280554-26280785,26281558-26282182,26282718-26284224 29 1.2 07_03_0626 + 20060013-20060273,20061017-20061274 27 2.9 06_01_0957 - 7378608-7378662,7378828-7379012 27 2.9 02_01_0083 - 566201-567127,567223-567464,567623-567880,568173-56... 27 2.9 09_04_0407 + 17345382-17345579,17345711-17346235 27 3.8 08_02_1081 + 24215323-24215335,24215450-24215572,24216241-242164... 27 3.8 01_07_0124 + 41212728-41212922,41215156-41215210,41215336-412171... 27 3.8 01_05_0118 + 18335065-18335553 27 3.8 06_01_0655 + 4742267-4742531,4743313-4744136 27 5.0 02_04_0433 - 22891261-22891509,22892181-22892301,22892405-228924... 27 5.0 06_01_0747 - 5587261-5587356,5587472-5587855,5588133-5588192,558... 26 6.6 05_06_0100 - 25576466-25576923,25577552-25577801,25577992-25578204 26 6.6 03_05_0823 - 27970038-27970258,27970279-27970544,27970608-279706... 26 6.6 02_02_0240 + 8196140-8198248,8198381-8198650 26 6.6 01_01_0785 - 6076089-6077615 26 6.6 03_05_0951 + 29093962-29094373,29095291-29095388,29095689-290960... 26 8.7 >06_03_1055 - 27234824-27234838,27236087-27236125,27236322-27237388, 27237422-27237630,27237650-27238053 Length = 577 Score = 30.7 bits (66), Expect = 0.31 Identities = 16/45 (35%), Positives = 27/45 (60%) Frame = -3 Query: 223 ASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGS 89 A+ A +GK + E E S+QCD T + +S RE ++R+P+ + Sbjct: 430 AAAAAAGKPISEHEAIEHLWSRQCDLTEILQNSSRE-KKRNPYAA 473 >07_03_0846 - 21983581-21986055 Length = 824 Score = 29.5 bits (63), Expect = 0.71 Identities = 19/50 (38%), Positives = 26/50 (52%) Frame = +3 Query: 81 DLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASA 230 DL+D G +R +C+T S PD S VS+ LPD+A+ A A Sbjct: 326 DLQDFTGGCKRNVPLQCQTN--SSSAQTQPDKFYSMVSVRLPDNAQSAVA 373 >02_04_0276 + 21491150-21492761,21492891-21492947,21493817-21493870, 21493994-21494022 Length = 583 Score = 29.1 bits (62), Expect = 0.93 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 4/63 (6%) Frame = -3 Query: 310 RTFGSCTRPSGRWCEATIRGLCLNASKAEAS--LAESGKDMLTVEPRESG--GSKQCDFT 143 R GS RP C A I+ L + AEA LA G D++ +G G+ Q D Sbjct: 86 RLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVMAYNAMVAGYCGAGQLDAA 145 Query: 142 SRV 134 R+ Sbjct: 146 RRL 148 >08_02_1344 - 26280554-26280785,26281558-26282182,26282718-26284224 Length = 787 Score = 28.7 bits (61), Expect = 1.2 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%) Frame = +3 Query: 39 GAVMHVLRKKTDSID----LRDPNGLRRRVSRFECETRLVKSH 155 G V+ L + TDS++ L +P+GL RRV F E+++ H Sbjct: 340 GTVLRYLFQDTDSVNNSGGLLNPSGLLRRVRMFVPESQVTSMH 382 >07_03_0626 + 20060013-20060273,20061017-20061274 Length = 172 Score = 27.5 bits (58), Expect = 2.9 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = +1 Query: 211 RLGWLRP*RRSGIIP 255 RLGWLRP R S ++P Sbjct: 32 RLGWLRPSRLSAVVP 46 >06_01_0957 - 7378608-7378662,7378828-7379012 Length = 79 Score = 27.5 bits (58), Expect = 2.9 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +3 Query: 45 VMHVLRKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPP 170 ++ LR T +I +R P L R S R+ SH + PP Sbjct: 14 LLDALRTTTAAIRVRAPAALSRAASEKIAVPRIAPSHAVPPP 55 >02_01_0083 - 566201-567127,567223-567464,567623-567880,568173-568298, 568420-568489 Length = 540 Score = 27.5 bits (58), Expect = 2.9 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = -1 Query: 204 ARICSLWSPESREALNNVTLLVAFRIQNARRDVEA 100 AR C W PESR ++ V ++A ++R+ A Sbjct: 449 ARECLQWEPESRPTMSEVVQILATIAPSSRKHAAA 483 >09_04_0407 + 17345382-17345579,17345711-17346235 Length = 240 Score = 27.1 bits (57), Expect = 3.8 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = -2 Query: 275 VVRSYHPGIMPERL*GRSQPSRIRQGYAHCGAP 177 + + YHP + +S S IR+ YAHC P Sbjct: 4 LAQEYHPKLPATNHYCKSLSSLIRETYAHCHVP 36 >08_02_1081 + 24215323-24215335,24215450-24215572,24216241-24216489, 24218517-24218720,24218864-24218993,24219610-24219679, 24219766-24219900,24219996-24220209,24220314-24220455, 24220630-24220851,24220997-24221195 Length = 566 Score = 27.1 bits (57), Expect = 3.8 Identities = 14/33 (42%), Positives = 16/33 (48%) Frame = -3 Query: 172 SGGSKQCDFTSRVSHSKRETRRRSPFGSRRSML 74 S G+ Q T R HS E RRRS R +L Sbjct: 212 SAGTDQMPNTPRSKHSATEQRRRSKINDRFQLL 244 >01_07_0124 + 41212728-41212922,41215156-41215210,41215336-41217128, 41217363-41217521,41217883-41218054,41218173-41218471, 41219060-41219368 Length = 993 Score = 27.1 bits (57), Expect = 3.8 Identities = 16/60 (26%), Positives = 31/60 (51%) Frame = +3 Query: 63 KKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAF 242 KKT ++ + P+ R + + + +V S C D G+ ++ + R+ASA++AF Sbjct: 566 KKTMAVVIASPSAGGRPRAFLKGASEVVLSRCSLVLDGTGNVEKLTDAKAKRVASAIDAF 625 >01_05_0118 + 18335065-18335553 Length = 162 Score = 27.1 bits (57), Expect = 3.8 Identities = 13/43 (30%), Positives = 24/43 (55%) Frame = -3 Query: 214 AESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSR 86 A+ G + V P +GG+++ + ++ K T RR+ FG+R Sbjct: 18 AQDGHRLPDVAPA-AGGTREPEHARLIARRKESTYRRTAFGNR 59 >06_01_0655 + 4742267-4742531,4743313-4744136 Length = 362 Score = 26.6 bits (56), Expect = 5.0 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = +3 Query: 81 DLRDPN-GLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLAS 227 ++RDP G+R + F +++ E RG ++ PD A +AS Sbjct: 129 EIRDPRKGVRVWLGTFNSPEEAARAYDAEARRIRGKKAKVNFPDGAPVAS 178 >02_04_0433 - 22891261-22891509,22892181-22892301,22892405-22892496, 22892692-22892755,22892855-22892920,22893102-22893193, 22893991-22894050,22894181-22894270,22894484-22894613, 22895066-22895157,22895299-22895373,22895663-22895754, 22896496-22896586,22897541-22897574,22897745-22897791, 22899110-22899209,22899300-22899436,22900837-22901015, 22901146-22901188,22901264-22901297,22901839-22901948, 22902043-22902224,22903062-22903168,22903266-22903480 Length = 833 Score = 26.6 bits (56), Expect = 5.0 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 3/45 (6%) Frame = +3 Query: 123 FECETRLVKSHCLE---PPDSRGSTVSISLPDSARLASALEAFRH 248 F + RL K HCLE P+S+ S+V +++ + A+ E H Sbjct: 524 FMWDMRLSKKHCLELIGHPESQFSSVKLNIDNRTVFAATKEGTVH 568 >06_01_0747 - 5587261-5587356,5587472-5587855,5588133-5588192, 5588428-5588484,5588663-5588800,5588901-5588966, 5589234-5589452,5589522-5589737,5589813-5589884, 5589952-5590205,5590356-5590525,5590840-5591029, 5592211-5592331,5592838-5592921,5593003-5593365, 5594530-5594724,5594938-5595933,5596329-5596370 Length = 1240 Score = 26.2 bits (55), Expect = 6.6 Identities = 17/48 (35%), Positives = 24/48 (50%) Frame = -3 Query: 295 CTRPSGRWCEATIRGLCLNASKAEASLAESGKDMLTVEPRESGGSKQC 152 C SG + TI+G C++A AE SL + KD + R G +C Sbjct: 952 CHGTSGAF-RKTIKGRCIHAFCAEESLPKD-KDTCAICHRNVGSCLKC 997 >05_06_0100 - 25576466-25576923,25577552-25577801,25577992-25578204 Length = 306 Score = 26.2 bits (55), Expect = 6.6 Identities = 17/57 (29%), Positives = 22/57 (38%) Frame = -1 Query: 177 ESREALNNVTLLVAFRIQNARRDVEAHLDHGDRCYRFFFLTRASRLRRSGYNSVRCR 7 ++ EA+ + A A R A C A RLR +GYNS CR Sbjct: 87 DAEEAMRQMRAAAAGACSCASRGAAAAAAGSGGCRSCTLRFLAERLRDAGYNSAICR 143 >03_05_0823 - 27970038-27970258,27970279-27970544,27970608-27970657, 27971272-27971538,27971633-27972001,27972373-27973278 Length = 692 Score = 26.2 bits (55), Expect = 6.6 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = +3 Query: 150 SHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPRMVASHHRPLGRV 293 SH L + GSTVSI+LP + F N ++ H PL R+ Sbjct: 194 SHTLRHQITVGSTVSINLP------VVNQVFSSNRAIIIPHTSPLARI 235 >02_02_0240 + 8196140-8198248,8198381-8198650 Length = 792 Score = 26.2 bits (55), Expect = 6.6 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +3 Query: 252 PRMVASHHRPLGRVHEP 302 P VA+H RPLG +H P Sbjct: 36 PPTVATHTRPLGIIHPP 52 >01_01_0785 - 6076089-6077615 Length = 508 Score = 26.2 bits (55), Expect = 6.6 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = -1 Query: 204 ARICSLWSPESREALNNVTLLVAFRIQNARRDVEAH 97 A + SLWSPES E + + Q R+V H Sbjct: 336 AEVASLWSPESGEPITAEKIAEMKYTQAVAREVVRH 371 >03_05_0951 + 29093962-29094373,29095291-29095388,29095689-29096087, 29096999-29097724,29097802-29097968,29098046-29098311, 29098396-29098581,29099072-29099346,29099435-29099683 Length = 925 Score = 25.8 bits (54), Expect = 8.7 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Frame = -3 Query: 232 KAEASLAESGKDMLTVEP-RESGGSKQCDFTSRVSHSKRETRRRS 101 K+ AS A G D P R GG K+ S + SKR + R+ Sbjct: 4 KSSASAAHQGGDAPAEAPRRRGGGGKRKSGGSSFTPSKRHAKERN 48 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,096,478 Number of Sequences: 37544 Number of extensions: 211225 Number of successful extensions: 669 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 659 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 669 length of database: 14,793,348 effective HSP length: 72 effective length of database: 12,090,180 effective search space used: 471517020 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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