BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0891
(336 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 23 2.3
DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein. 23 3.1
AJ237706-1|CAB40347.1| 570|Anopheles gambiae putative 5'-nucleo... 23 4.1
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 22 5.4
Z49833-1|CAA89994.1| 250|Anopheles gambiae serine proteinase pr... 22 7.1
CR954257-15|CAJ14166.1| 271|Anopheles gambiae predicted protein... 21 9.4
AJ000502-1|CAA04136.1| 299|Anopheles gambiae iron regulatory pr... 21 9.4
>AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein.
Length = 679
Score = 23.4 bits (48), Expect = 2.3
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +3
Query: 117 SRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPRMVASHHR 278
SR +L K + L+ + S PDSA ++ R +P +V HH+
Sbjct: 450 SRPAKSVKLFKPYLLDEEPKQQSQQQ-QRPDSALAEDDKDSTRESPAIVEQHHQ 502
>DQ342048-1|ABC69940.1| 847|Anopheles gambiae STIP protein.
Length = 847
Score = 23.0 bits (47), Expect = 3.1
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 184 EPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRSM 77
+ R GSK S + S+ E RR+P RSM
Sbjct: 106 DARPRFGSKAAAANSSATSSESEDERRTPPQDMRSM 141
>AJ237706-1|CAB40347.1| 570|Anopheles gambiae putative
5'-nucleotidase protein.
Length = 570
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 289 RPSGRWCEATIRGLCLNA 236
R S RWCE T+ L +A
Sbjct: 363 RESCRWCECTLGDLIADA 380
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -3
Query: 298 SCTRPSGRWCEATIRGLCL 242
SC RP G C G C+
Sbjct: 594 SCDRPGGLLCSGPDHGRCV 612
>Z49833-1|CAA89994.1| 250|Anopheles gambiae serine proteinase
protein.
Length = 250
Score = 21.8 bits (44), Expect = 7.1
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 97 FGSRRSMLSVFFLNTCITAPK 35
FGS RS SV FL T PK
Sbjct: 53 FGSDRSRFSVKFLMHDRTVPK 73
>CR954257-15|CAJ14166.1| 271|Anopheles gambiae predicted protein
protein.
Length = 271
Score = 21.4 bits (43), Expect = 9.4
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +3
Query: 57 LRKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGST 188
LR D +D PN L++ E K EPP+ + T
Sbjct: 113 LRAPRDFLDAGKPNDLQQEGETLNKEPVETKPQESEPPEMQEVT 156
>AJ000502-1|CAA04136.1| 299|Anopheles gambiae iron regulatory
protein protein.
Length = 299
Score = 21.4 bits (43), Expect = 9.4
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +3
Query: 9 DIELSYIRTFGAVMHVLRKKTD 74
+++L Y R G + +++RK D
Sbjct: 278 EVDLEYFRNGGILNYMIRKMID 299
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 362,569
Number of Sequences: 2352
Number of extensions: 7182
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 23774685
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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