Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0891
         (336 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.      33   0.29 
AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type ...    33   0.29 
U97698-1|AAC51370.1|  421|Homo sapiens secretory mucin MUC6 prot...    29   3.6  
AK096772-1|BAC04860.1|  577|Homo sapiens protein ( Homo sapiens ...    29   3.6  
AK092533-1|BAC03911.1|  325|Homo sapiens protein ( Homo sapiens ...    29   3.6  
BC117169-1|AAI17170.1|  567|Homo sapiens ZNF619 protein protein.       29   4.7  
AK075245-1|BAC11495.1|  560|Homo sapiens protein ( Homo sapiens ...    29   4.7  
Y09723-1|CAA70889.1|  803|Homo sapiens Miz-1 protein protein.          28   8.2  
DQ438889-1|ABE66441.1|  244|Homo sapiens GLIS family zinc finger...    28   8.2  
DQ438888-1|ABE66440.1|  244|Homo sapiens GLIS family zinc finger...    28   8.2  
DQ438887-1|ABE66439.1|  244|Homo sapiens GLIS family zinc finger...    28   8.2  
DQ438886-1|ABE66438.1|  244|Homo sapiens GLIS family zinc finger...    28   8.2  
DQ438877-1|ABE66434.1|  930|Homo sapiens GLIS family zinc finger...    28   8.2  
BC126163-1|AAI26164.1|  803|Homo sapiens zinc finger and BTB dom...    28   8.2  
AY750848-1|AAU81930.1| 1032|Homo sapiens RTN3-A1 protein.              28   8.2  
AY427821-1|AAR02474.1| 1013|Homo sapiens reticulon 3-A protein.        28   8.2  
AL034555-3|CAB85445.1|  803|Homo sapiens zinc finger and BTB dom...    28   8.2  
AK223618-1|BAD97338.1|  803|Homo sapiens zinc finger and BTB dom...    28   8.2  

>BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.
          Length = 322

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = -1

Query: 297 HALARAAGGAKLPSGDYA*TPLRPKPA*PNPARICSLWSPESRE 166
           H  A A  G   P+ +   TP  P P  P PA +CS  SPE R+
Sbjct: 51  HLQAFAQPGTHFPTSNC--TPTPPTPVLPGPASLCSPASPELRQ 92


>AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type
           containing 12 protein.
          Length = 210

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = -1

Query: 297 HALARAAGGAKLPSGDYA*TPLRPKPA*PNPARICSLWSPESRE 166
           H  A A  G   P+ +   TP  P P  P PA +CS  SPE R+
Sbjct: 51  HLQAFAQPGTHFPTSNC--TPTPPTPVLPGPASLCSPASPELRQ 92


>U97698-1|AAC51370.1|  421|Homo sapiens secretory mucin MUC6
           protein.
          Length = 421

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +3

Query: 183 STVSISLPDSARLASALEAFRHNPRMVASHH 275
           STV++S   S+ LAS+  AF   PR  AS H
Sbjct: 211 STVTVSPTPSSHLASSTIAFPSTPRTTASTH 241


>AK096772-1|BAC04860.1|  577|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39453 fis, clone PROST2010046, highly similar to
           Homo sapiens secretory mucin MUC6 (MUC6) mRNA. ).
          Length = 577

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +3

Query: 183 STVSISLPDSARLASALEAFRHNPRMVASHH 275
           STV++S   S+ LAS+  AF   PR  AS H
Sbjct: 367 STVTVSPTPSSHLASSTIAFPSTPRTTASTH 397


>AK092533-1|BAC03911.1|  325|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35214 fis, clone PROST1000512, highly similar to
           Homo sapiens secretory mucin MUC6 (MUC6) mRNA. ).
          Length = 325

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +3

Query: 183 STVSISLPDSARLASALEAFRHNPRMVASHH 275
           STV++S   S+ LAS+  AF   PR  AS H
Sbjct: 198 STVTVSPTPSSHLASSTIAFPSTPRTTASTH 228


>BC117169-1|AAI17170.1|  567|Homo sapiens ZNF619 protein protein.
          Length = 567

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -3

Query: 187 VEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRSMLSVFFLNTC 50
           ++  ++G   +CDF   VS S  +TR   P G+RRS +    L+TC
Sbjct: 12  IQGGDAGELCKCDFL--VSISIPQTRSDIPAGARRSSMGPRSLDTC 55


>AK075245-1|BAC11495.1|  560|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90764 fis, clone THYRO1000580, moderately
           similar to ZINC FINGER PROTEIN 184. ).
          Length = 560

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -3

Query: 187 VEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRSMLSVFFLNTC 50
           ++  ++G   +CDF   VS S  +TR   P G+RRS +    L+TC
Sbjct: 12  IQGGDAGELCKCDFL--VSISIPQTRSDIPAGARRSSMGPRSLDTC 55


>Y09723-1|CAA70889.1|  803|Homo sapiens Miz-1 protein protein.
          Length = 803

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -3

Query: 238 ASKAEASLAESGKDMLTVEPRESGGSKQ 155
           A++AEA+L+ES +  + VEP   G  +Q
Sbjct: 207 AAEAEAALSESSEQEMEVEPARKGEEEQ 234


>DQ438889-1|ABE66441.1|  244|Homo sapiens GLIS family zinc finger 3
           transcript variant TS5 protein.
          Length = 244

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = +3

Query: 252 PRMVASHHRPLGRVHE--PNVRNCGSS 326
           PRMV+ HH P  R H   P    CGS+
Sbjct: 20  PRMVSGHHIPAIRAHSGTPGPSPCGST 46


>DQ438888-1|ABE66440.1|  244|Homo sapiens GLIS family zinc finger 3
           transcript variant TS4 protein.
          Length = 244

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = +3

Query: 252 PRMVASHHRPLGRVHE--PNVRNCGSS 326
           PRMV+ HH P  R H   P    CGS+
Sbjct: 20  PRMVSGHHIPAIRAHSGTPGPSPCGST 46


>DQ438887-1|ABE66439.1|  244|Homo sapiens GLIS family zinc finger 3
           transcript variant TS3 protein.
          Length = 244

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = +3

Query: 252 PRMVASHHRPLGRVHE--PNVRNCGSS 326
           PRMV+ HH P  R H   P    CGS+
Sbjct: 20  PRMVSGHHIPAIRAHSGTPGPSPCGST 46


>DQ438886-1|ABE66438.1|  244|Homo sapiens GLIS family zinc finger 3
           transcript variant TS2 protein.
          Length = 244

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = +3

Query: 252 PRMVASHHRPLGRVHE--PNVRNCGSS 326
           PRMV+ HH P  R H   P    CGS+
Sbjct: 20  PRMVSGHHIPAIRAHSGTPGPSPCGST 46


>DQ438877-1|ABE66434.1|  930|Homo sapiens GLIS family zinc finger 3
           transcript variant long T1 protein.
          Length = 930

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = +3

Query: 252 PRMVASHHRPLGRVHE--PNVRNCGSS 326
           PRMV+ HH P  R H   P    CGS+
Sbjct: 20  PRMVSGHHIPAIRAHSGTPGPSPCGST 46


>BC126163-1|AAI26164.1|  803|Homo sapiens zinc finger and BTB domain
           containing 17 protein.
          Length = 803

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -3

Query: 238 ASKAEASLAESGKDMLTVEPRESGGSKQ 155
           A++AEA+L+ES +  + VEP   G  +Q
Sbjct: 207 AAEAEAALSESSEQEMEVEPARKGEEEQ 234


>AY750848-1|AAU81930.1| 1032|Homo sapiens RTN3-A1 protein.
          Length = 1032

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
 Frame = -3

Query: 268 EATIRGLCLNASKAEASLAESGKDMLTVEP------RESGGSKQCDFTSRVSHSKRETRR 107
           E   +G+  +   A  +++E   D  T  P       ESGGS+  D  S+ S   +ET  
Sbjct: 660 ETRDKGIVDSERNAFKAISEKMTDFKTTPPVEVLHENESGGSEIKDIGSKYSEQSKETNG 719

Query: 106 RSPFG 92
             P G
Sbjct: 720 SEPLG 724


>AY427821-1|AAR02474.1| 1013|Homo sapiens reticulon 3-A protein.
          Length = 1013

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
 Frame = -3

Query: 268 EATIRGLCLNASKAEASLAESGKDMLTVEP------RESGGSKQCDFTSRVSHSKRETRR 107
           E   +G+  +   A  +++E   D  T  P       ESGGS+  D  S+ S   +ET  
Sbjct: 641 ETRDKGIVDSERNAFKAISEKMTDFKTTPPVEVLHENESGGSEIKDIGSKYSEQSKETNG 700

Query: 106 RSPFG 92
             P G
Sbjct: 701 SEPLG 705


>AL034555-3|CAB85445.1|  803|Homo sapiens zinc finger and BTB domain
           containing 17 protein.
          Length = 803

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -3

Query: 238 ASKAEASLAESGKDMLTVEPRESGGSKQ 155
           A++AEA+L+ES +  + VEP   G  +Q
Sbjct: 207 AAEAEAALSESSEQEMEVEPARKGEEEQ 234


>AK223618-1|BAD97338.1|  803|Homo sapiens zinc finger and BTB domain
           containing 17 variant protein.
          Length = 803

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -3

Query: 238 ASKAEASLAESGKDMLTVEPRESGGSKQ 155
           A++AEA+L+ES +  + VEP   G  +Q
Sbjct: 207 AAEAEAALSESSEQEMEVEPARKGEEEQ 234


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,610,347
Number of Sequences: 237096
Number of extensions: 1034861
Number of successful extensions: 2805
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2805
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)