Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0891
         (336 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70037-4|CAA93877.1|  146|Caenorhabditis elegans Hypothetical pr...    28   1.9  
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr...    28   1.9  
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p...    28   1.9  
AF040661-10|AAG24215.1|  426|Caenorhabditis elegans Hypothetical...    27   2.5  
AF040661-11|AAG24210.1|  211|Caenorhabditis elegans Hypothetical...    27   3.3  
Z93376-2|CAD59146.2|  578|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z82279-4|CAD59150.2|  578|Caenorhabditis elegans Hypothetical pr...    27   4.4  
AL132949-42|CAD59173.2|  578|Caenorhabditis elegans Hypothetical...    27   4.4  
AF040661-12|AAG24221.1|  210|Caenorhabditis elegans Hypothetical...    27   4.4  
AL132847-1|CAB63371.1|  375|Caenorhabditis elegans Hypothetical ...    26   5.8  
AL110487-13|CAB54429.2|  268|Caenorhabditis elegans Hypothetical...    26   5.8  
AF456253-1|AAL59611.1|  268|Caenorhabditis elegans secreted 2-im...    26   5.8  
AF026207-1|AAB71266.1|  522|Caenorhabditis elegans Hypothetical ...    26   5.8  
AC006608-5|ABC71834.1|  311|Caenorhabditis elegans Hypothetical ...    26   7.7  
AC006608-4|AAF39758.2|  381|Caenorhabditis elegans Hypothetical ...    26   7.7  

>Z70037-4|CAA93877.1|  146|Caenorhabditis elegans Hypothetical
           protein T27D12.3 protein.
          Length = 146

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -3

Query: 289 RPSGRWCEATIRGLCLNASKAEAS 218
           RPSG WC     GL L  ++ EAS
Sbjct: 35  RPSGPWCVKLFVGLYLQGNRNEAS 58


>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
           protein T11B7.4d protein.
          Length = 1424

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 19/66 (28%), Positives = 26/66 (39%)
 Frame = +3

Query: 90  DPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPRMVAS 269
           +  GL R   + + ET  +K H    P S   +V      + R A A   F   PR+   
Sbjct: 789 ESRGLHRHEEKAQIETSTIKIH---EPSSPPPSVHKFGAVNTRAAPAPVQFMQTPRIAVK 845

Query: 270 HHRPLG 287
            H P G
Sbjct: 846 IHEPTG 851


>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
           protein T11B7.4d protein.
          Length = 1424

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 19/66 (28%), Positives = 26/66 (39%)
 Frame = +3

Query: 90  DPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPRMVAS 269
           +  GL R   + + ET  +K H    P S   +V      + R A A   F   PR+   
Sbjct: 789 ESRGLHRHEEKAQIETSTIKIH---EPSSPPPSVHKFGAVNTRAAPAPVQFMQTPRIAVK 845

Query: 270 HHRPLG 287
            H P G
Sbjct: 846 IHEPTG 851


>AF040661-10|AAG24215.1|  426|Caenorhabditis elegans Hypothetical
           protein W10G11.6 protein.
          Length = 426

 Score = 27.5 bits (58), Expect = 2.5
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -3

Query: 328 REEPQFRTFGSCTRPSGRWCEATIRGLCLNASKAEASLA 212
           R EP +R F    RPSG WC     G   +A+KA+A  A
Sbjct: 255 RCEPGWRFFN---RPSGGWCIRVFTG--FHAAKADAEAA 288



 Score = 25.8 bits (54), Expect = 7.7
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -3

Query: 289 RPSGRWCEATIRGLCLNASKAEASLAESGKDMLTVEPRE 173
           RPSG WC     G+     +AE + A  G  +  ++ R+
Sbjct: 93  RPSGGWCMRVFTGIHDAKIEAERACAAKGGTLTGLQNRD 131


>AF040661-11|AAG24210.1|  211|Caenorhabditis elegans Hypothetical
           protein W10G11.15 protein.
          Length = 211

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 14/55 (25%), Positives = 22/55 (40%)
 Frame = -3

Query: 289 RPSGRWCEATIRGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHS 125
           RPSG WC     G     + AE S    G  +  ++ R      Q    ++++ S
Sbjct: 49  RPSGGWCMRVFEGFNAAKTDAEKSCKSVGSTLSGIQNRNEALYIQTALLAQIARS 103


>Z93376-2|CAD59146.2|  578|Caenorhabditis elegans Hypothetical
           protein E01F3.1b protein.
          Length = 578

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = -1

Query: 240 TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVEAHLD 91
           T L   PA PN AR  S W  E+  + NN     + +  +I  +R++   H+D
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171


>Z82279-4|CAD59150.2|  578|Caenorhabditis elegans Hypothetical
           protein E01F3.1b protein.
          Length = 578

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = -1

Query: 240 TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVEAHLD 91
           T L   PA PN AR  S W  E+  + NN     + +  +I  +R++   H+D
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171


>AL132949-42|CAD59173.2|  578|Caenorhabditis elegans Hypothetical
           protein E01F3.1b protein.
          Length = 578

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
 Frame = -1

Query: 240 TPLRPKPA*PNPARICSLWSPESREALNN---VTLLVAFRIQNARRDVEAHLD 91
           T L   PA PN AR  S W  E+  + NN     + +  +I  +R++   H+D
Sbjct: 119 TGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVD 171


>AF040661-12|AAG24221.1|  210|Caenorhabditis elegans Hypothetical
           protein W10G11.14 protein.
          Length = 210

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -3

Query: 322 EPQFRTFGSCTRPSGRWCEATIRGLCLNASKAEA 221
           EP ++ F    RPSG WC     G   NA KA+A
Sbjct: 41  EPGWKFFN---RPSGGWCMRVFAG--FNAKKADA 69


>AL132847-1|CAB63371.1|  375|Caenorhabditis elegans Hypothetical
           protein Y48G10A.2 protein.
          Length = 375

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 10/51 (19%), Positives = 27/51 (52%)
 Frame = -3

Query: 262 TIRGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETR 110
           +++G   + +    ++    K ++  EP+E+   +  D+ + ++HSK E +
Sbjct: 306 SLKGQIKSENYTSIAVTRLYKMLIRTEPKETALRRAADYLNELTHSKTEKK 356


>AL110487-13|CAB54429.2|  268|Caenorhabditis elegans Hypothetical
           protein Y39E4B.8 protein.
          Length = 268

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = +3

Query: 153 HCLEPPDSRGSTVSISLPDSARLASALEAFRHNPRMVAS 269
           HC  PPD+        + D A L +    F  +PR   S
Sbjct: 56  HCSVPPDAEHEIAWTRVSDGALLTAGNRTFTRDPRWQVS 94


>AF456253-1|AAL59611.1|  268|Caenorhabditis elegans secreted
           2-immunoglobulin-domainprotein ZIG-8 protein.
          Length = 268

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = +3

Query: 153 HCLEPPDSRGSTVSISLPDSARLASALEAFRHNPRMVAS 269
           HC  PPD+        + D A L +    F  +PR   S
Sbjct: 56  HCSVPPDAEHEIAWTRVSDGALLTAGNRTFTRDPRWQVS 94


>AF026207-1|AAB71266.1|  522|Caenorhabditis elegans Hypothetical
           protein H42K12.3 protein.
          Length = 522

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 14/55 (25%), Positives = 27/55 (49%)
 Frame = -3

Query: 214 AESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRSMLSVFFLNTC 50
           A+S + +   EP E+  S   D+T     ++R+ RRR     R+ + ++  +  C
Sbjct: 368 ADSSRAIEPQEPEETYFSDWSDWTPCTKSNERQVRRRRCLNLRKCLGALMQVQNC 422


>AC006608-5|ABC71834.1|  311|Caenorhabditis elegans Hypothetical
           protein C15F1.5b protein.
          Length = 311

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 180 PESREALNNVTLLVAFRIQNARRDVEAHLDHGD 82
           PE +   +  TL   F +Q  + D+  ++ HGD
Sbjct: 177 PEKKAFFSKFTLQAKFSMQTLKDDIVTNIIHGD 209


>AC006608-4|AAF39758.2|  381|Caenorhabditis elegans Hypothetical
           protein C15F1.5a protein.
          Length = 381

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 180 PESREALNNVTLLVAFRIQNARRDVEAHLDHGD 82
           PE +   +  TL   F +Q  + D+  ++ HGD
Sbjct: 247 PEKKAFFSKFTLQAKFSMQTLKDDIVTNIIHGD 279


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,042,788
Number of Sequences: 27780
Number of extensions: 156329
Number of successful extensions: 468
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)