Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0891
(336 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g14740.1 68414.m01762 expressed protein 28 1.3
At4g33830.1 68417.m04801 glycosyl hydrolase family 10 protein xy... 28 1.8
At1g67970.1 68414.m07764 heat shock factor protein, putative (HS... 28 1.8
At1g06460.1 68414.m00684 31.2 kDa small heat shock family protei... 28 1.8
At4g33840.1 68417.m04802 glycosyl hydrolase family 10 protein xy... 27 2.4
At4g33860.1 68417.m04804 glycosyl hydrolase family 10 protein xy... 27 3.1
At2g14690.1 68415.m01652 glycosyl hydrolase family 10 protein si... 27 4.1
At1g63640.2 68414.m07198 kinesin motor protein-related C-termina... 26 5.4
At1g63640.1 68414.m07197 kinesin motor protein-related C-termina... 26 5.4
At5g62710.1 68418.m07869 leucine-rich repeat family protein / pr... 26 7.2
At4g35730.1 68417.m05071 expressed protein contains Pfam profil... 26 7.2
At4g24930.1 68417.m03570 thylakoid lumenal 17.9 kDa protein, chl... 26 7.2
At1g18900.2 68414.m02353 pentatricopeptide (PPR) repeat-containi... 26 7.2
At1g18900.1 68414.m02352 pentatricopeptide (PPR) repeat-containi... 26 7.2
At5g49230.1 68418.m06094 drought-responsive family protein simil... 25 9.5
At4g03000.2 68417.m00408 expressed protein contains similarity t... 25 9.5
At4g03000.1 68417.m00407 expressed protein contains similarity t... 25 9.5
At3g15710.1 68416.m01991 signal peptidase, putative similar to S... 25 9.5
At2g17550.1 68415.m02031 expressed protein 25 9.5
At1g29800.1 68414.m03643 zinc finger (FYVE type) family protein ... 25 9.5
At1g21740.1 68414.m02721 expressed protein contains Pfam domains... 25 9.5
>At1g14740.1 68414.m01762 expressed protein
Length = 733
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3
Query: 268 EATIRGLCLNASKAEASLAESGKDMLTVEPRESGGSK--QCDFTSRVSHSKRETRRRS 101
E T+ LC N+ K SL + GK+++T S K + DF + + ++R++
Sbjct: 69 ELTLSYLCENSGKLAESLGQKGKEVVTFSENSSYDDKWVERDFFNLREMNPNSSKRKA 126
>At4g33830.1 68417.m04801 glycosyl hydrolase family 10 protein xylan
endohydrolase isoenzyme X-I, Hordeum
vulgare,PID:g1813595
Length = 544
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2
Query: 137 RFAFKTRDATSKPIWITEID 78
R A T AT PIW+TEID
Sbjct: 398 RSALDTLGATGLPIWLTEID 417
>At1g67970.1 68414.m07764 heat shock factor protein, putative (HSF5)
/ heat shock transcription factor, putative (HSTF5)
identical to heat shock transcription factor 5 (HSF5)
SP:Q9S7U5 from [Arabidopsis thaliana]; contains Pfam
profile: PF00447 HSF-type DNA-binding domain
Length = 374
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = -3
Query: 280 GRWCEATIRGLCLNASKAEASLAESGKDMLTVEPRESGGSKQCD 149
G W + + +K + ++ + GKD LT+E E G+ + D
Sbjct: 286 GAWEKLLLLSPSRKKTKKQENIVKKGKDDLTLEEEEEDGTMELD 329
>At1g06460.1 68414.m00684 31.2 kDa small heat shock family protein /
hsp20 family protein contains Pfam profile: PF00011
Hsp20/alpha crystallin family
Length = 285
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -1
Query: 231 RPKPA*PNPARICSLWSPESREALNNVTLLVAFRIQNAR-RDVEAHLDH 88
RPK P A + ++WSP S A + + +VA + A D+ +D+
Sbjct: 169 RPKLDLPKLANLGTVWSPRSNVAESTHSYVVAIELPGASINDIRVEVDN 217
>At4g33840.1 68417.m04802 glycosyl hydrolase family 10 protein xylan
endohydrolase isoenzyme X-I, Hordeum
vulgare,PID:g1813595
Length = 576
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2
Query: 137 RFAFKTRDATSKPIWITEID 78
R A T AT PIW+TEID
Sbjct: 429 RSALDTFGATGLPIWLTEID 448
>At4g33860.1 68417.m04804 glycosyl hydrolase family 10 protein xylan
endohydrolase isoenzyme X-I, Hordeum
vulgare,PID:g1813595; contains Pfam profile PF00331:
Glycosyl hydrolase family 10
Length = 576
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 137 RFAFKTRDATSKPIWITEID 78
R A T AT PIW+TE+D
Sbjct: 429 RSALDTLAATGLPIWLTEVD 448
>At2g14690.1 68415.m01652 glycosyl hydrolase family 10 protein
similar to tapetum specific protein GI:3885492 from [Zea
mays]
Length = 529
Score = 26.6 bits (56), Expect = 4.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2
Query: 137 RFAFKTRDATSKPIWITEID 78
R+A T + S P+W+TE+D
Sbjct: 374 RYALDTLGSLSFPVWLTEVD 393
>At1g63640.2 68414.m07198 kinesin motor protein-related C-terminal
region is similar to C-term region of kinesin motor
protein GB:AAB51397 (Mus musculus); contains Pfam
profile: PF00225 Kinesin motor domain
Length = 1065
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 42 AVMHVLRKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTV 191
A MH +R D ++L + + R V R +SHC+ RG V
Sbjct: 636 ASMHCVRSTEDVLELMNIGLMNRTVGATALNERSSRSHCVLSVHVRGVDV 685
>At1g63640.1 68414.m07197 kinesin motor protein-related C-terminal
region is similar to C-term region of kinesin motor
protein GB:AAB51397 (Mus musculus); contains Pfam
profile: PF00225 Kinesin motor domain
Length = 1064
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 42 AVMHVLRKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTV 191
A MH +R D ++L + + R V R +SHC+ RG V
Sbjct: 636 ASMHCVRSTEDVLELMNIGLMNRTVGATALNERSSRSHCVLSVHVRGVDV 685
>At5g62710.1 68418.m07869 leucine-rich repeat family protein /
protein kinase family protein contains protein kinase
domain, Pfam:PF00069; contains leucine-rich repeats,
Pfam:PF00560
Length = 604
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -1
Query: 204 ARICSLWSPESREALNNVTLLVAFRIQNARRDVEAHLD-HGDRC 76
A C+ +PE+R A+N V L+ + + ++ + D H D C
Sbjct: 561 AERCTDANPENRPAMNQVAQLLEQEVMSPSSGIDYYDDSHSDYC 604
>At4g35730.1 68417.m05071 expressed protein contains Pfam profile:
PF03398 eukaryotic protein of unknown function, DUF292
Length = 430
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 171 DSRGSTVSISLPDSARLASALEAFRHN 251
DS G V LPD LA+ EA RH+
Sbjct: 399 DSSGHQVHPKLPDYDILAARFEAIRHS 425
>At4g24930.1 68417.m03570 thylakoid lumenal 17.9 kDa protein,
chloroplast SP:Q9SW33;GI:17369630;PMID:11719511; similar
to expressed protein gi:12321169 {Oryza sativa}
Length = 225
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 216 RLASALEAFRHNPRMVASHHRPLGRVHEPNVRNCGSSR 329
+L A+ + + NP+ V P GR E V G SR
Sbjct: 129 KLKEAIMSTQKNPKFVVLEDTPYGRYVEAEVEGGGFSR 166
>At1g18900.2 68414.m02353 pentatricopeptide (PPR) repeat-containing
protein low similarity to 67kD chloroplastic RNA-binding
protein, P67 [Arabidopsis thaliana] GI:9755842; contains
Pfam profile PF01535: PPR repeat
Length = 860
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 186 WSPESREALNNVTLLV-AFRIQNARRDVEAHLDHGDRCYRFFFLTRASRLRRSGY 25
W P + EAL N+ L + A++ + + D+G+ F++L R + G+
Sbjct: 314 WGPAAEEALQNLGLRIDAYQANQVLKQMN---DYGNALGFFYWLKRQPGFKHDGH 365
>At1g18900.1 68414.m02352 pentatricopeptide (PPR) repeat-containing
protein low similarity to 67kD chloroplastic RNA-binding
protein, P67 [Arabidopsis thaliana] GI:9755842; contains
Pfam profile PF01535: PPR repeat
Length = 860
Score = 25.8 bits (54), Expect = 7.2
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 186 WSPESREALNNVTLLV-AFRIQNARRDVEAHLDHGDRCYRFFFLTRASRLRRSGY 25
W P + EAL N+ L + A++ + + D+G+ F++L R + G+
Sbjct: 314 WGPAAEEALQNLGLRIDAYQANQVLKQMN---DYGNALGFFYWLKRQPGFKHDGH 365
>At5g49230.1 68418.m06094 drought-responsive family protein similar
to drought-induced mRNA, Di19 [Arabidopsis thaliana]
gi|469110|emb|CAA55321
Length = 211
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -1
Query: 111 DVEAHL--DHGDRCYRFFFLTRASRLRRSGYNS 19
D+ H+ HG+R F++ R RLR+ GY+S
Sbjct: 84 DIVGHITTQHGNR----FYVQRRRRLRKGGYSS 112
>At4g03000.2 68417.m00408 expressed protein contains similarity to
hypothetical proteins
Length = 814
Score = 25.4 bits (53), Expect = 9.5
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -3
Query: 241 NASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRSML 74
N+ AS A GK++ +V G+K TS VS K + R+ +ML
Sbjct: 272 NSKNPHASGATPGKEVFSVSTASGEGTKSASLTS-VSDEKLVSCRKGRTKKEMAML 326
>At4g03000.1 68417.m00407 expressed protein contains similarity to
hypothetical proteins
Length = 814
Score = 25.4 bits (53), Expect = 9.5
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -3
Query: 241 NASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRSML 74
N+ AS A GK++ +V G+K TS VS K + R+ +ML
Sbjct: 272 NSKNPHASGATPGKEVFSVSTASGEGTKSASLTS-VSDEKLVSCRKGRTKKEMAML 326
>At3g15710.1 68416.m01991 signal peptidase, putative similar to
SP|P13679 Microsomal signal peptidase 21 kDa subunit (EC
3.4.-.-) {Canis familiaris}; contains Pfam profile:
PF00461 signal peptidase I
Length = 180
Score = 25.4 bits (53), Expect = 9.5
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +3
Query: 114 VSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRHNPRMVASHHRPLGRV 293
V+ E +V S +EP RG + + + D A + F + R + HR + +V
Sbjct: 43 VTGSESPVVVVLSESMEPGFQRGDILFLRMTDEPIRAGEIVVFSVDGREIPIVHRAI-KV 101
Query: 294 HE 299
HE
Sbjct: 102 HE 103
>At2g17550.1 68415.m02031 expressed protein
Length = 765
Score = 25.4 bits (53), Expect = 9.5
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = +3
Query: 45 VMHVLRKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLA 224
V ++ + T + + D N LRR+++ E E ++ EP + V + PD +
Sbjct: 529 VDYLSQVSTPDVTVSDENELRRQINELESEVQVRTPVEEEPIQEIETIVDLGNPDKVFVR 588
Query: 225 SALEA 239
L A
Sbjct: 589 DLLVA 593
>At1g29800.1 68414.m03643 zinc finger (FYVE type) family protein
contains Pfam domain PF01363: FYVE zinc finger
Length = 433
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 201 LPDSARLASALEAFRHNPRMVASHH 275
LPDSA A L + R +P M + HH
Sbjct: 106 LPDSAASACMLCSVRFHPIMCSRHH 130
>At1g21740.1 68414.m02721 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 953
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 240 TPLRPKPA*PNPARICS 190
+P+RP PA P+P RI S
Sbjct: 274 SPVRPTPAPPSPPRISS 290
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,705,672
Number of Sequences: 28952
Number of extensions: 151107
Number of successful extensions: 434
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 389454624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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