Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0890
         (262 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ970248-1|CAI96720.1|  132|Anopheles gambiae putative reverse t...    25   0.45 
AJ970247-1|CAI96719.1|  132|Anopheles gambiae putative reverse t...    25   0.45 
AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse t...    25   0.45 
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    23   1.8  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   1.8  
AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease pr...    23   2.4  
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        22   3.2  
AF457554-1|AAL68784.1|  269|Anopheles gambiae salivary gland 1-l...    22   3.2  
EF519445-2|ABP73500.1|  177|Anopheles gambiae CTL4 protein.            22   4.2  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    22   4.2  
AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    22   4.2  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    22   4.2  
DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.        21   7.3  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          21   7.3  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    21   9.7  

>AJ970248-1|CAI96720.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 214 PVVAYIRGYRSGRTY 258
           P+VA++R Y  GRTY
Sbjct: 96  PLVAWLRSYLMGRTY 110


>AJ970247-1|CAI96719.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 214 PVVAYIRGYRSGRTY 258
           P+VA++R Y  GRTY
Sbjct: 96  PLVAWLRSYLMGRTY 110


>AJ970246-1|CAI96718.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 214 PVVAYIRGYRSGRTY 258
           P+VA++R Y  GRTY
Sbjct: 96  PLVAWLRSYLMGRTY 110


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 173 PGTFARTVSGKGCDQW 220
           P   AR V GK CD W
Sbjct: 169 PEVVARRVYGKPCDVW 184


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +2

Query: 113 PRALPRLRGAATEQGRPTGHPGTFARTVSGK 205
           PR    + G   E+G P  HP  + +   G+
Sbjct: 200 PRGYAGIPGTKGEKGEPARHPENYNKGQKGE 230


>AJ250916-1|CAB91840.1|  435|Anopheles gambiae serine protease
           protein.
          Length = 435

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 229 CMPPLVAPFSGYSSRKGSW 173
           CMPPL   ++GY +    W
Sbjct: 312 CMPPLDDAWTGYQAVVTGW 330


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 207 PFPDTVRAKVPGCPVGRPCSVAA 139
           P P TVR + P  P   P  + A
Sbjct: 57  PAPSTVRPRPPAPPTNAPSQLPA 79


>AF457554-1|AAL68784.1|  269|Anopheles gambiae salivary gland 1-like
           3 protein protein.
          Length = 269

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 77  WCRNGIDADMSVPRALP 127
           W   G+D  +S P ALP
Sbjct: 170 WSAEGLDRMVSFPNALP 186


>EF519445-2|ABP73500.1|  177|Anopheles gambiae CTL4 protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 52  DSVSWCDSVVPKWNR 96
           +S  W D VVP  NR
Sbjct: 132 ESAEWADGVVPANNR 146


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -3

Query: 119 HAAPTYRRRFHFGTTLSHHDTESHSTLL 36
           H +PT+      G    HH    HS L+
Sbjct: 416 HGSPTHLHNHRSGGGGRHHHHHHHSALV 443


>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -1

Query: 85  SAPHYHTMTPNHI 47
           S PHY  + P H+
Sbjct: 497 SVPHYEPLDPEHV 509


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 186 AKVPGCPVGRPCSVAAP 136
           A+VPG  V  P + +AP
Sbjct: 273 AEVPGAVVANPAATSAP 289


>DQ013848-1|AAY40257.1|  304|Anopheles gambiae CYP325D1 protein.
          Length = 304

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 136 RCRNRARTAYRASRNLCANCIRKR 207
           RC+NR   A+        NCI  R
Sbjct: 274 RCKNRMGCAFMPFNTGSRNCIGSR 297


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 156 PCSVAAPRSRGRARGTDISAS 94
           P SVA+P SR      + SAS
Sbjct: 77  PSSVASPNSRASNMSPESSAS 97


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +2

Query: 155 GRPTGHPGTF 184
           G+P GHP  F
Sbjct: 522 GKPPGHPSAF 531


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 326,325
Number of Sequences: 2352
Number of extensions: 6346
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 54
effective length of database: 436,971
effective search space used: 13983072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)