BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0890 (262 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY070849-1|AAL48471.1| 665|Drosophila melanogaster GM02933p pro... 101 2e-22 AE014297-2|AAN13329.1| 665|Drosophila melanogaster CG12581-PB, ... 101 2e-22 AE014297-1|AAF52174.2| 665|Drosophila melanogaster CG12581-PA, ... 101 2e-22 AY075317-1|AAL68184.1| 200|Drosophila melanogaster GH07296p pro... 31 0.29 AE014297-3535|AAF56289.1| 200|Drosophila melanogaster CG5762-PA... 31 0.29 AY118675-1|AAM50535.1| 1073|Drosophila melanogaster AT05180p pro... 29 0.68 AE014297-1565|AAF54847.1| 1059|Drosophila melanogaster CG14395-P... 29 0.68 AF435839-1|AAL30824.1| 567|Drosophila melanogaster suppressor o... 28 1.6 AY084137-1|AAL89875.1| 887|Drosophila melanogaster RE22456p pro... 27 2.7 AF145624-1|AAD38599.1| 918|Drosophila melanogaster BcDNA.GH0480... 27 2.7 AE013599-921|AAF58903.1| 918|Drosophila melanogaster CG1688-PA ... 27 2.7 AE014134-3155|AAF53840.1| 3781|Drosophila melanogaster CG10631-P... 27 3.6 BT011375-1|AAR96167.1| 254|Drosophila melanogaster LP12691p pro... 27 4.8 AE014296-456|AAF47648.1| 254|Drosophila melanogaster CG16762-PA... 27 4.8 X87141-1|CAA60619.1| 722|Drosophila melanogaster VND (ventral n... 26 8.3 AL031883-2|CAA21410.1| 723|Drosophila melanogaster EG:118B3.1,F... 26 8.3 AE014298-61|AAF45521.1| 723|Drosophila melanogaster CG6172-PA, ... 26 8.3 AE014298-60|ABI30961.1| 577|Drosophila melanogaster CG6172-PB, ... 26 8.3 AE014296-3188|AAF49130.1| 1174|Drosophila melanogaster CG9392-PA... 26 8.3 >AY070849-1|AAL48471.1| 665|Drosophila melanogaster GM02933p protein. Length = 665 Score = 101 bits (241), Expect = 2e-22 Identities = 46/56 (82%), Positives = 49/56 (87%), Gaps = 1/56 (1%) Frame = +3 Query: 90 ESTPICRCRVLYLGSAVPQQSKDGLQGIQEPLRELYPEKGATSG-GIHSWLSVWSN 254 +STPICRCRVLYLGSAVP+QSKDGLQGIQEPLR LYP +GA GI SWLSVWSN Sbjct: 3 DSTPICRCRVLYLGSAVPRQSKDGLQGIQEPLRSLYPSEGAVGAKGIDSWLSVWSN 58 >AE014297-2|AAN13329.1| 665|Drosophila melanogaster CG12581-PB, isoform B protein. Length = 665 Score = 101 bits (241), Expect = 2e-22 Identities = 46/56 (82%), Positives = 49/56 (87%), Gaps = 1/56 (1%) Frame = +3 Query: 90 ESTPICRCRVLYLGSAVPQQSKDGLQGIQEPLRELYPEKGATSG-GIHSWLSVWSN 254 +STPICRCRVLYLGSAVP+QSKDGLQGIQEPLR LYP +GA GI SWLSVWSN Sbjct: 3 DSTPICRCRVLYLGSAVPRQSKDGLQGIQEPLRSLYPSEGAVGAKGIDSWLSVWSN 58 >AE014297-1|AAF52174.2| 665|Drosophila melanogaster CG12581-PA, isoform A protein. Length = 665 Score = 101 bits (241), Expect = 2e-22 Identities = 46/56 (82%), Positives = 49/56 (87%), Gaps = 1/56 (1%) Frame = +3 Query: 90 ESTPICRCRVLYLGSAVPQQSKDGLQGIQEPLRELYPEKGATSG-GIHSWLSVWSN 254 +STPICRCRVLYLGSAVP+QSKDGLQGIQEPLR LYP +GA GI SWLSVWSN Sbjct: 3 DSTPICRCRVLYLGSAVPRQSKDGLQGIQEPLRSLYPSEGAVGAKGIDSWLSVWSN 58 >AY075317-1|AAL68184.1| 200|Drosophila melanogaster GH07296p protein. Length = 200 Score = 30.7 bits (66), Expect = 0.29 Identities = 19/47 (40%), Positives = 25/47 (53%) Frame = +1 Query: 46 ECDSVSWCDSVVPKWNRRRYVGAACSTSAPRCRNRARTAYRASRNLC 186 EC V++ DSV K NRRR + T APR R RA+ ++ C Sbjct: 103 ECTWVNFPDSVATKRNRRRDFLESMETEAPR-RRRAQEERPSTAKPC 148 >AE014297-3535|AAF56289.1| 200|Drosophila melanogaster CG5762-PA protein. Length = 200 Score = 30.7 bits (66), Expect = 0.29 Identities = 19/47 (40%), Positives = 25/47 (53%) Frame = +1 Query: 46 ECDSVSWCDSVVPKWNRRRYVGAACSTSAPRCRNRARTAYRASRNLC 186 EC V++ DSV K NRRR + T APR R RA+ ++ C Sbjct: 103 ECTWVNFPDSVATKRNRRRDFLESMETEAPR-RRRAQEERPSTAKPC 148 >AY118675-1|AAM50535.1| 1073|Drosophila melanogaster AT05180p protein. Length = 1073 Score = 29.5 bits (63), Expect = 0.68 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +3 Query: 117 VLYLGSAVPQQSKDGLQGIQEPLRELY 197 V LGS + LQG+QEPLR+LY Sbjct: 168 VTCLGSLPLKDKVTSLQGLQEPLRQLY 194 >AE014297-1565|AAF54847.1| 1059|Drosophila melanogaster CG14395-PA protein. Length = 1059 Score = 29.5 bits (63), Expect = 0.68 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +3 Query: 117 VLYLGSAVPQQSKDGLQGIQEPLRELY 197 V LGS + LQG+QEPLR+LY Sbjct: 168 VTCLGSLPLKDKVTSLQGLQEPLRQLY 194 >AF435839-1|AAL30824.1| 567|Drosophila melanogaster suppressor of cytokine signalingSOCS36E-II protein. Length = 567 Score = 28.3 bits (60), Expect = 1.6 Identities = 14/50 (28%), Positives = 21/50 (42%) Frame = -2 Query: 156 PCSVAAPRSRGRARGTDISASIPFRHHTITP*HRITFNTISLATVRWTGT 7 P A G AR + + I F H + +IT ++ +RWT T Sbjct: 435 PAGGAGHAGIGAARNMTVHSQIDFMHCLVPDLEKITNSSFYWGKIRWTAT 484 >AY084137-1|AAL89875.1| 887|Drosophila melanogaster RE22456p protein. Length = 887 Score = 27.5 bits (58), Expect = 2.7 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = +2 Query: 2 PHVPVQRTVAKLIVLNVIRCHGVIVWCRNGIDAD 103 PH+ +++V KL L + HG +C DAD Sbjct: 767 PHLKNRKSVTKLTDLKELTAHGTTKYCLVSQDAD 800 >AF145624-1|AAD38599.1| 918|Drosophila melanogaster BcDNA.GH04802 protein. Length = 918 Score = 27.5 bits (58), Expect = 2.7 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Frame = -2 Query: 189 RAKVPGCPVGRPCSV---AAPRSRGRARGTDISASIPFRHHTITP*HRIT 49 R ++ CP G P V A+P S + G + + + F HT+ P R T Sbjct: 695 RERLSNCPHGTPSRVPLIASPLSVPQDSGENTTRNTAFNRHTLQPLSRKT 744 >AE013599-921|AAF58903.1| 918|Drosophila melanogaster CG1688-PA protein. Length = 918 Score = 27.5 bits (58), Expect = 2.7 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Frame = -2 Query: 189 RAKVPGCPVGRPCSV---AAPRSRGRARGTDISASIPFRHHTITP*HRIT 49 R ++ CP G P V A+P S + G + + + F HT+ P R T Sbjct: 695 RERLSNCPHGTPSRVPLIASPLSVPQDSGENTTRNTAFNRHTLQPLSRKT 744 >AE014134-3155|AAF53840.1| 3781|Drosophila melanogaster CG10631-PA protein. Length = 3781 Score = 27.1 bits (57), Expect = 3.6 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -2 Query: 192 VRAKVPGCPVGRPCSVAAPRSRGRAR 115 +R K +G PCS A+P RGR R Sbjct: 2392 LRIKTDLTSLGSPCSSASPSPRGRIR 2417 >BT011375-1|AAR96167.1| 254|Drosophila melanogaster LP12691p protein. Length = 254 Score = 26.6 bits (56), Expect = 4.8 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = +2 Query: 26 VAKLIVLNVIRCHGVIVWCRNGIDADMSVPRALPRL 133 +A+L N +C+ R GIDAD R RL Sbjct: 75 IAELYSANYTKCYNAAADSRKGIDADFLATRRTIRL 110 >AE014296-456|AAF47648.1| 254|Drosophila melanogaster CG16762-PA protein. Length = 254 Score = 26.6 bits (56), Expect = 4.8 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = +2 Query: 26 VAKLIVLNVIRCHGVIVWCRNGIDADMSVPRALPRL 133 +A+L N +C+ R GIDAD R RL Sbjct: 75 IAELYSANYTKCYNAAADSRKGIDADFLATRRTIRL 110 >X87141-1|CAA60619.1| 722|Drosophila melanogaster VND (ventral nervous system defective)protein. Length = 722 Score = 25.8 bits (54), Expect = 8.3 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -3 Query: 134 GAEVEHAAPTYRRRFHFGTTLSHHDTESHST 42 G+E+++AA H G+ LSHH + S ST Sbjct: 209 GSELKNAAAAAAAAAHHGSDLSHH-SASEST 238 >AL031883-2|CAA21410.1| 723|Drosophila melanogaster EG:118B3.1,FBgn0003986;vnd protein. Length = 723 Score = 25.8 bits (54), Expect = 8.3 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -3 Query: 134 GAEVEHAAPTYRRRFHFGTTLSHHDTESHST 42 G+E+++AA H G+ LSHH + S ST Sbjct: 210 GSELKNAAAAAAAAAHHGSDLSHH-SASEST 239 >AE014298-61|AAF45521.1| 723|Drosophila melanogaster CG6172-PA, isoform A protein. Length = 723 Score = 25.8 bits (54), Expect = 8.3 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -3 Query: 134 GAEVEHAAPTYRRRFHFGTTLSHHDTESHST 42 G+E+++AA H G+ LSHH + S ST Sbjct: 210 GSELKNAAAAAAAAAHHGSDLSHH-SASEST 239 >AE014298-60|ABI30961.1| 577|Drosophila melanogaster CG6172-PB, isoform B protein. Length = 577 Score = 25.8 bits (54), Expect = 8.3 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = -3 Query: 134 GAEVEHAAPTYRRRFHFGTTLSHHDTESHST 42 G+E+++AA H G+ LSHH + S ST Sbjct: 64 GSELKNAAAAAAAAAHHGSDLSHH-SASEST 93 >AE014296-3188|AAF49130.1| 1174|Drosophila melanogaster CG9392-PA protein. Length = 1174 Score = 25.8 bits (54), Expect = 8.3 Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 4/32 (12%) Frame = -2 Query: 225 CHHWSH----PFPDTVRAKVPGCPVGRPCSVA 142 C HW P V A GCPVG CS A Sbjct: 54 CDHWKFCEKVPNRSDVEADSLGCPVGLVCSNA 85 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,080,191 Number of Sequences: 53049 Number of extensions: 296318 Number of successful extensions: 1104 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1046 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1101 length of database: 24,988,368 effective HSP length: 65 effective length of database: 21,540,183 effective search space used: 452343843 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -