BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0890 (262 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 81 8e-17 AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 81 8e-17 Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical pr... 29 0.60 Z32840-5|CAD88215.1| 509|Caenorhabditis elegans Hypothetical pr... 28 0.79 Z32840-4|CAA83680.1| 460|Caenorhabditis elegans Hypothetical pr... 28 0.79 Z32840-3|CAB63430.2| 457|Caenorhabditis elegans Hypothetical pr... 28 0.79 Z81506-2|CAB04129.1| 257|Caenorhabditis elegans Hypothetical pr... 27 1.8 Z81529-4|CAB04295.1| 272|Caenorhabditis elegans Hypothetical pr... 27 2.4 Z81056-3|CAB02910.1| 718|Caenorhabditis elegans Hypothetical pr... 27 2.4 U89792-1|AAB94380.1| 339|Caenorhabditis elegans seven-in-absent... 27 2.4 U63557-1|AAC47301.1| 558|Caenorhabditis elegans transmembrane r... 27 2.4 U23450-5|AAK31466.3| 706|Caenorhabditis elegans Hypothetical pr... 27 2.4 AC024759-5|AAK68432.1| 419|Caenorhabditis elegans Hypothetical ... 27 2.4 AC024201-2|AAK82924.1| 556|Caenorhabditis elegans Abnormal cell... 27 2.4 AC024201-1|AAF36028.1| 558|Caenorhabditis elegans Abnormal cell... 27 2.4 U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 26 3.2 U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 26 3.2 AC006777-3|AAK72309.1| 345|Caenorhabditis elegans Hypothetical ... 26 3.2 AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily a... 26 3.2 U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 26 4.2 U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 26 4.2 AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ... 26 4.2 Z93385-10|CAB07643.1| 702|Caenorhabditis elegans Hypothetical p... 25 5.6 Z81114-7|CAB03290.1| 702|Caenorhabditis elegans Hypothetical pr... 25 5.6 U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 25 5.6 Z81529-11|CAB04297.1| 249|Caenorhabditis elegans Hypothetical p... 25 7.4 Z81529-8|CAB04291.1| 249|Caenorhabditis elegans Hypothetical pr... 25 7.4 Z81529-7|CAB04292.1| 248|Caenorhabditis elegans Hypothetical pr... 25 7.4 Z68882-14|CAA93109.1| 366|Caenorhabditis elegans Hypothetical p... 25 7.4 Z68104-2|CAA92113.1| 359|Caenorhabditis elegans Hypothetical pr... 25 7.4 Z48055-1|CAA88134.1| 544|Caenorhabditis elegans Hypothetical pr... 25 7.4 Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr... 25 7.4 U37430-5|AAB52674.2| 389|Caenorhabditis elegans Set (trithorax/... 25 7.4 M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele... 25 7.4 AL034393-23|CAH19089.1| 274|Caenorhabditis elegans Hypothetical... 25 7.4 AF039038-6|AAK21431.2| 629|Caenorhabditis elegans Hypothetical ... 25 7.4 Z79756-3|CAB02121.1| 527|Caenorhabditis elegans Hypothetical pr... 25 9.8 U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical pr... 25 9.8 U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical pr... 25 9.8 U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical pr... 25 9.8 U64835-2|AAO25998.1| 337|Caenorhabditis elegans Serpentine rece... 25 9.8 U39647-7|AAP31441.1| 544|Caenorhabditis elegans Twik family of ... 25 9.8 U39647-5|AAM51531.1| 576|Caenorhabditis elegans Twik family of ... 25 9.8 U39647-4|AAM51532.1| 562|Caenorhabditis elegans Twik family of ... 25 9.8 AF083651-1|AAC32862.1| 562|Caenorhabditis elegans putative pota... 25 9.8 AF083648-1|AAC32859.1| 544|Caenorhabditis elegans putative pota... 25 9.8 AF083647-1|AAC32858.1| 576|Caenorhabditis elegans putative pota... 25 9.8 >AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical protein R148.5b protein. Length = 505 Score = 81.4 bits (192), Expect = 8e-17 Identities = 35/53 (66%), Positives = 44/53 (83%), Gaps = 1/53 (1%) Frame = +3 Query: 99 PICRCRVLYLGSAVPQQSKDGLQGIQEPLRELYP-EKGATSGGIHSWLSVWSN 254 P+CRCRVLY+GS+VP +KDGLQGIQ+PL+E YP ++ + GI SWLSVWSN Sbjct: 4 PLCRCRVLYIGSSVPTITKDGLQGIQQPLKERYPIQESPDTRGIDSWLSVWSN 56 >AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical protein R148.5a protein. Length = 528 Score = 81.4 bits (192), Expect = 8e-17 Identities = 35/53 (66%), Positives = 44/53 (83%), Gaps = 1/53 (1%) Frame = +3 Query: 99 PICRCRVLYLGSAVPQQSKDGLQGIQEPLRELYP-EKGATSGGIHSWLSVWSN 254 P+CRCRVLY+GS+VP +KDGLQGIQ+PL+E YP ++ + GI SWLSVWSN Sbjct: 4 PLCRCRVLYIGSSVPTITKDGLQGIQQPLKERYPIQESPDTRGIDSWLSVWSN 56 >Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical protein F09C3.1 protein. Length = 1391 Score = 28.7 bits (61), Expect = 0.60 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +3 Query: 123 YLGSAVPQQSKDGLQGIQEPLRELYPEKGATS 218 Y+ ++ QQ DGLQG +EPL +++ + S Sbjct: 249 YVEDSLAQQYLDGLQGEEEPLAKIFVQSVVNS 280 >Z32840-5|CAD88215.1| 509|Caenorhabditis elegans Hypothetical protein C07G2.2c protein. Length = 509 Score = 28.3 bits (60), Expect = 0.79 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = -2 Query: 174 GCPVGRPCSVAAPRSRGRARGTDISASIPFRHHTI 70 G PVGRP + R RGR R T R +TI Sbjct: 363 GNPVGRPQNGTPGRGRGRGRSTTADMQPDERRNTI 397 >Z32840-4|CAA83680.1| 460|Caenorhabditis elegans Hypothetical protein C07G2.2b protein. Length = 460 Score = 28.3 bits (60), Expect = 0.79 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = -2 Query: 174 GCPVGRPCSVAAPRSRGRARGTDISASIPFRHHTI 70 G PVGRP + R RGR R T R +TI Sbjct: 314 GNPVGRPQNGTPGRGRGRGRSTTADMQPDERRNTI 348 >Z32840-3|CAB63430.2| 457|Caenorhabditis elegans Hypothetical protein C07G2.2a protein. Length = 457 Score = 28.3 bits (60), Expect = 0.79 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = -2 Query: 174 GCPVGRPCSVAAPRSRGRARGTDISASIPFRHHTI 70 G PVGRP + R RGR R T R +TI Sbjct: 314 GNPVGRPQNGTPGRGRGRGRSTTADMQPDERRNTI 348 >Z81506-2|CAB04129.1| 257|Caenorhabditis elegans Hypothetical protein F16H6.3 protein. Length = 257 Score = 27.1 bits (57), Expect = 1.8 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = +1 Query: 109 GAACSTSAPRCRNRARTAYRASRNLCANCIRKRVRPVVA 225 G C TSA CRN + L A C +R R ++A Sbjct: 108 GFCCKTSAYNCRNADFPRLNCATILPAQCRDQRWRTIIA 146 >Z81529-4|CAB04295.1| 272|Caenorhabditis elegans Hypothetical protein F35E8.6 protein. Length = 272 Score = 26.6 bits (56), Expect = 2.4 Identities = 14/39 (35%), Positives = 17/39 (43%) Frame = +1 Query: 109 GAACSTSAPRCRNRARTAYRASRNLCANCIRKRVRPVVA 225 G C TSA C N A + S+ C RPV+A Sbjct: 104 GYCCETSAYNCPNAALPSIDCSKVTPTQCKSPAWRPVIA 142 >Z81056-3|CAB02910.1| 718|Caenorhabditis elegans Hypothetical protein F09F3.5 protein. Length = 718 Score = 26.6 bits (56), Expect = 2.4 Identities = 11/32 (34%), Positives = 15/32 (46%) Frame = +1 Query: 97 RRYVGAACSTSAPRCRNRARTAYRASRNLCAN 192 +R CS+ C NR T+ R+ LC N Sbjct: 135 KRQANRRCSSPPINCNNRFHTSIRSITGLCNN 166 >U89792-1|AAB94380.1| 339|Caenorhabditis elegans seven-in-absentia protein homologue-1 protein. Length = 339 Score = 26.6 bits (56), Expect = 2.4 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = -1 Query: 229 CMPPLVAPFSGYSSRKGSWMPCRPSLLCCGTAE-PR*STRHRHIGVDSIS 83 C+ ++ P+ SS CRP L CC T P S R++G++ I+ Sbjct: 93 CLEYMLPPYMQCSSGHLVCSNCRPKLQCCPTCRGPTPSV--RNLGLEKIA 140 >U63557-1|AAC47301.1| 558|Caenorhabditis elegans transmembrane receptor LIN-17 protein. Length = 558 Score = 26.6 bits (56), Expect = 2.4 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -2 Query: 246 RPIATNVCHHWSHPFPDTVRAKVPGCPVGRPCSVAAPRS 130 +P+ CH H F +V A P CP+G P +V + +S Sbjct: 66 KPLMKTKCHPHIHFFICSVFA--PMCPIGMPQAVTSCKS 102 >U23450-5|AAK31466.3| 706|Caenorhabditis elegans Hypothetical protein C30B5.1 protein. Length = 706 Score = 26.6 bits (56), Expect = 2.4 Identities = 12/35 (34%), Positives = 17/35 (48%) Frame = +1 Query: 94 RRRYVGAACSTSAPRCRNRARTAYRASRNLCANCI 198 R RY G A A RC + +R+ R + NC+ Sbjct: 141 RTRYRGQAREYPAYRCNRKGCQTFRSIRKVFGNCM 175 >AC024759-5|AAK68432.1| 419|Caenorhabditis elegans Hypothetical protein Y37E11AR.2 protein. Length = 419 Score = 26.6 bits (56), Expect = 2.4 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = -1 Query: 229 CMPPLVAPFSGYSSRKGSWMPCRPSLLCCGTAE-PR*STRHRHIGVDSIS 83 C+ ++ P+ SS CRP L CC T P S R++G++ I+ Sbjct: 159 CLEYMLPPYMQCSSGHLVCSNCRPKLQCCPTCRGPTPSV--RNLGLEKIA 206 >AC024201-2|AAK82924.1| 556|Caenorhabditis elegans Abnormal cell lineage protein 17,isoform b protein. Length = 556 Score = 26.6 bits (56), Expect = 2.4 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -2 Query: 246 RPIATNVCHHWSHPFPDTVRAKVPGCPVGRPCSVAAPRS 130 +P+ CH H F +V A P CP+G P +V + +S Sbjct: 66 KPLMKTKCHPHIHFFICSVFA--PMCPIGMPQAVTSCKS 102 >AC024201-1|AAF36028.1| 558|Caenorhabditis elegans Abnormal cell lineage protein 17,isoform a protein. Length = 558 Score = 26.6 bits (56), Expect = 2.4 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = -2 Query: 246 RPIATNVCHHWSHPFPDTVRAKVPGCPVGRPCSVAAPRS 130 +P+ CH H F +V A P CP+G P +V + +S Sbjct: 66 KPLMKTKCHPHIHFFICSVFA--PMCPIGMPQAVTSCKS 102 >U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein F57F4.4 protein. Length = 2090 Score = 26.2 bits (55), Expect = 3.2 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +1 Query: 37 NSVECDSVSWCDSVVPKWNRRRYVGAACSTSAPRCRNRART 159 NS+ C+S+ D+ P WN + G C+ +A C N A T Sbjct: 1347 NSI-CNSLELYDNCKPVWNDNQVTGCCCN-NANNC-NIANT 1384 >U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) interacting proteinprotein 1 protein. Length = 2153 Score = 26.2 bits (55), Expect = 3.2 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +1 Query: 37 NSVECDSVSWCDSVVPKWNRRRYVGAACSTSAPRCRNRART 159 NS+ C+S+ D+ P WN + G C+ +A C N A T Sbjct: 1347 NSI-CNSLELYDNCKPVWNDNQVTGCCCN-NANNC-NIANT 1384 >AC006777-3|AAK72309.1| 345|Caenorhabditis elegans Hypothetical protein Y46H3D.6 protein. Length = 345 Score = 26.2 bits (55), Expect = 3.2 Identities = 12/33 (36%), Positives = 15/33 (45%) Frame = +1 Query: 97 RRYVGAACSTSAPRCRNRARTAYRASRNLCANC 195 RR V A S+ RC + + R LCA C Sbjct: 35 RRKVAAGKPLSSSRCSGSCKLENQVLRRLCAKC 67 >AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily assigned gene nameprotein 80 protein. Length = 4900 Score = 26.2 bits (55), Expect = 3.2 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -1 Query: 256 TFDQTDSHECMPPLVAPFSGYSSRKGSWMPCRPSL 152 +FDQ ++E PL+ P S + S +P RP L Sbjct: 2609 SFDQDVTYERSSPLLIPTPSSSFEQASTVPDRPPL 2643 >U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of presynaptic morphologyprotein 1 protein. Length = 3766 Score = 25.8 bits (54), Expect = 4.2 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = -1 Query: 166 CRPSLLCCGTAEPR*STRHRHIGVDSISAPHYHTMTPNHI 47 CRP C EP R +H+ S +AP T+ P+ + Sbjct: 722 CRP---CGEVTEPAQPGRAQHVQFSSTAAPQRSTLHPSRV 758 >U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical protein C16A3.7 protein. Length = 1119 Score = 25.8 bits (54), Expect = 4.2 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 6/34 (17%) Frame = +1 Query: 7 RTCPANRR*TNSV-----EC-DSVSWCDSVVPKW 90 RTCP R S+ +C D V CDSV KW Sbjct: 464 RTCPCGRNTLQSLGVTRKKCTDMVPTCDSVCDKW 497 >AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical protein F07B7.12 protein. Length = 1900 Score = 25.8 bits (54), Expect = 4.2 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = -1 Query: 166 CRPSLLCCGTAEPR*STRHRHIGVDSISAPHYHTMTPNHI 47 CRP C EP R +H+ S +AP T+ P+ + Sbjct: 722 CRP---CGEVTEPAQPGRAQHVQFSSTAAPQRSTLHPSRV 758 >Z93385-10|CAB07643.1| 702|Caenorhabditis elegans Hypothetical protein M01E5.6 protein. Length = 702 Score = 25.4 bits (53), Expect = 5.6 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = +2 Query: 89 GIDADMSVPRALPRLRGAATEQ 154 G+ D +PR PR+ A TE+ Sbjct: 417 GLTQDQEIPRKAPRVESAETEE 438 >Z81114-7|CAB03290.1| 702|Caenorhabditis elegans Hypothetical protein M01E5.6 protein. Length = 702 Score = 25.4 bits (53), Expect = 5.6 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = +2 Query: 89 GIDADMSVPRALPRLRGAATEQ 154 G+ D +PR PR+ A TE+ Sbjct: 417 GLTQDQEIPRKAPRVESAETEE 438 >U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical protein T09B4.5a protein. Length = 327 Score = 25.4 bits (53), Expect = 5.6 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = -2 Query: 186 AKVPGCPVGRPCSVAAPRSRGRARGTDISAS 94 +K P P P S +A RSR R+RG +AS Sbjct: 72 SKTPKTPSKTPSSASA-RSRSRSRGRPTNAS 101 >Z81529-11|CAB04297.1| 249|Caenorhabditis elegans Hypothetical protein F35E8.13 protein. Length = 249 Score = 25.0 bits (52), Expect = 7.4 Identities = 12/42 (28%), Positives = 16/42 (38%) Frame = +1 Query: 100 RYVGAACSTSAPRCRNRARTAYRASRNLCANCIRKRVRPVVA 225 R G C TS C N A + C+ RP++A Sbjct: 103 RTCGLCCQTSGYNCPNVAYPRLNCGTITASQCLSPVWRPIIA 144 >Z81529-8|CAB04291.1| 249|Caenorhabditis elegans Hypothetical protein F35E8.10 protein. Length = 249 Score = 25.0 bits (52), Expect = 7.4 Identities = 12/42 (28%), Positives = 16/42 (38%) Frame = +1 Query: 100 RYVGAACSTSAPRCRNRARTAYRASRNLCANCIRKRVRPVVA 225 R G C TS C N A + C+ RP++A Sbjct: 103 RTCGLCCQTSGYNCPNVAYPRLNCGTITASQCLSPVWRPIIA 144 >Z81529-7|CAB04292.1| 248|Caenorhabditis elegans Hypothetical protein F35E8.9 protein. Length = 248 Score = 25.0 bits (52), Expect = 7.4 Identities = 13/42 (30%), Positives = 17/42 (40%) Frame = +1 Query: 100 RYVGAACSTSAPRCRNRARTAYRASRNLCANCIRKRVRPVVA 225 R G C TSA C N A + + CI R ++A Sbjct: 103 RTCGLCCQTSAYSCPNVAYPRLNCASITASQCISPAWRTIIA 144 >Z68882-14|CAA93109.1| 366|Caenorhabditis elegans Hypothetical protein C47E12.11 protein. Length = 366 Score = 25.0 bits (52), Expect = 7.4 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = -3 Query: 107 TYRRRFHFGTTLSH 66 T R+RFH GTT H Sbjct: 129 TIRKRFHIGTTCPH 142 >Z68104-2|CAA92113.1| 359|Caenorhabditis elegans Hypothetical protein F08B12.2 protein. Length = 359 Score = 25.0 bits (52), Expect = 7.4 Identities = 8/21 (38%), Positives = 12/21 (57%) Frame = +1 Query: 178 NLCANCIRKRVRPVVAYIRGY 240 N C C++KRV ++ GY Sbjct: 305 NKCPICLKKRVNDTALFVSGY 325 >Z48055-1|CAA88134.1| 544|Caenorhabditis elegans Hypothetical protein T07A5.3 protein. Length = 544 Score = 25.0 bits (52), Expect = 7.4 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%) Frame = +2 Query: 113 PRALPRLRGAATEQGRPTGHPGTFARTVSGKGCDQW-WHTFVAIGL 247 PR P L G A G G G TV+ + D W W +A+ + Sbjct: 414 PRYAPILMGIANGLGAVAGVGGMVTNTVTYQNPDGWKWVFLLAMAI 459 >Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical protein R107.8 protein. Length = 1429 Score = 25.0 bits (52), Expect = 7.4 Identities = 9/38 (23%), Positives = 20/38 (52%) Frame = +3 Query: 75 CGAEMESTPICRCRVLYLGSAVPQQSKDGLQGIQEPLR 188 C + +P+C+C+ ++G ++ G G++ LR Sbjct: 419 CMHTSDHSPVCQCKNGFIGKRCEKECPIGFGGVRCDLR 456 >U37430-5|AAB52674.2| 389|Caenorhabditis elegans Set (trithorax/polycomb) domaincontaining protein 12 protein. Length = 389 Score = 25.0 bits (52), Expect = 7.4 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%) Frame = -2 Query: 150 SVAAPRSR-GRARGTDISASIPFRHHT 73 ++ P+SR GR R TD++A +P T Sbjct: 282 TIPVPKSRRGRKRKTDVTAPVPLATKT 308 >M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.elegans homeotic lin-12 protein gene, complete cds. ). Length = 1429 Score = 25.0 bits (52), Expect = 7.4 Identities = 9/38 (23%), Positives = 20/38 (52%) Frame = +3 Query: 75 CGAEMESTPICRCRVLYLGSAVPQQSKDGLQGIQEPLR 188 C + +P+C+C+ ++G ++ G G++ LR Sbjct: 419 CMHTSDHSPVCQCKNGFIGKRCEKECPIGFGGVRCDLR 456 >AL034393-23|CAH19089.1| 274|Caenorhabditis elegans Hypothetical protein Y18D10A.26 protein. Length = 274 Score = 25.0 bits (52), Expect = 7.4 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = -3 Query: 104 YRRRFHFGTTLSHHDTESHS 45 +R+R HFG H +T HS Sbjct: 230 FRKRTHFGKLWKHVETSRHS 249 >AF039038-6|AAK21431.2| 629|Caenorhabditis elegans Hypothetical protein K06A5.1 protein. Length = 629 Score = 25.0 bits (52), Expect = 7.4 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +1 Query: 133 PRCRNRARTAYRASRNLCANCIRKRVRP 216 PR R+R+R S N CA I+KR P Sbjct: 392 PRSRSRSRVVL--SENSCAEIIKKRNPP 417 >Z79756-3|CAB02121.1| 527|Caenorhabditis elegans Hypothetical protein F53C11.4 protein. Length = 527 Score = 24.6 bits (51), Expect = 9.8 Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 5/37 (13%) Frame = -1 Query: 103 IGVDSISAPHYHTMTPNHIQ-----HY*FSDGSLDRY 8 IG+D APH H N Q H F + SLD Y Sbjct: 297 IGLDKSEAPHLHKFIQNITQAPLMVHTDFDNESLDCY 333 >U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical protein R57.1b protein. Length = 576 Score = 24.6 bits (51), Expect = 9.8 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +1 Query: 166 RASRNLCANCIRKRVRPVVAYIRGYRSGRTYL 261 + S N+ + KR+R V+ YIRG +Y+ Sbjct: 332 KLSINVHSELRTKRIRNVIGYIRGSEEPDSYI 363 >U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical protein R57.1c protein. Length = 751 Score = 24.6 bits (51), Expect = 9.8 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +1 Query: 166 RASRNLCANCIRKRVRPVVAYIRGYRSGRTYL 261 + S N+ + KR+R V+ YIRG +Y+ Sbjct: 332 KLSINVHSELRTKRIRNVIGYIRGSEEPDSYI 363 >U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical protein R57.1a protein. Length = 770 Score = 24.6 bits (51), Expect = 9.8 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +1 Query: 166 RASRNLCANCIRKRVRPVVAYIRGYRSGRTYL 261 + S N+ + KR+R V+ YIRG +Y+ Sbjct: 351 KLSINVHSELRTKRIRNVIGYIRGSEEPDSYI 382 >U64835-2|AAO25998.1| 337|Caenorhabditis elegans Serpentine receptor, class g (gamma)protein 29 protein. Length = 337 Score = 24.6 bits (51), Expect = 9.8 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = -1 Query: 157 SLLCCGTAEPR*STRHRHIGVDSISAPHYH 68 S LCC + + + STR + V I+ H H Sbjct: 306 SSLCCCSKKTKSSTRTTKVSVQPITMVHSH 335 >U39647-7|AAP31441.1| 544|Caenorhabditis elegans Twik family of potassium channelsprotein 17, isoform e protein. Length = 544 Score = 24.6 bits (51), Expect = 9.8 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = -1 Query: 139 TAEPR*STRHRHIGVDSISAPHYHTMTP 56 TA+PR S IGV P+YH P Sbjct: 34 TAQPRPSITSATIGVGDPFIPYYHYRKP 61 >U39647-5|AAM51531.1| 576|Caenorhabditis elegans Twik family of potassium channelsprotein 17, isoform c protein. Length = 576 Score = 24.6 bits (51), Expect = 9.8 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = -1 Query: 139 TAEPR*STRHRHIGVDSISAPHYHTMTP 56 TA+PR S IGV P+YH P Sbjct: 34 TAQPRPSITSATIGVGDPFIPYYHYRKP 61 >U39647-4|AAM51532.1| 562|Caenorhabditis elegans Twik family of potassium channelsprotein 17, isoform d protein. Length = 562 Score = 24.6 bits (51), Expect = 9.8 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = -1 Query: 139 TAEPR*STRHRHIGVDSISAPHYHTMTP 56 TA+PR S IGV P+YH P Sbjct: 34 TAQPRPSITSATIGVGDPFIPYYHYRKP 61 >AF083651-1|AAC32862.1| 562|Caenorhabditis elegans putative potassium channel subunitn2P17m2-1 protein. Length = 562 Score = 24.6 bits (51), Expect = 9.8 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = -1 Query: 139 TAEPR*STRHRHIGVDSISAPHYHTMTP 56 TA+PR S IGV P+YH P Sbjct: 34 TAQPRPSITSATIGVGDPFIPYYHYRKP 61 >AF083648-1|AAC32859.1| 544|Caenorhabditis elegans putative potassium channel subunitn2P17m2-3 protein. Length = 544 Score = 24.6 bits (51), Expect = 9.8 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = -1 Query: 139 TAEPR*STRHRHIGVDSISAPHYHTMTP 56 TA+PR S IGV P+YH P Sbjct: 34 TAQPRPSITSATIGVGDPFIPYYHYRKP 61 >AF083647-1|AAC32858.1| 576|Caenorhabditis elegans putative potassium channel subunitn2P17m2-2 protein. Length = 576 Score = 24.6 bits (51), Expect = 9.8 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = -1 Query: 139 TAEPR*STRHRHIGVDSISAPHYHTMTP 56 TA+PR S IGV P+YH P Sbjct: 34 TAQPRPSITSATIGVGDPFIPYYHYRKP 61 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 6,955,923 Number of Sequences: 27780 Number of extensions: 140768 Number of successful extensions: 521 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 508 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 519 length of database: 12,740,198 effective HSP length: 65 effective length of database: 10,934,498 effective search space used: 229624458 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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