BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0890 (262 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 2.5 AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 20 4.4 AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 20 4.4 DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 20 5.8 AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 20 5.8 AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 19 7.6 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 19 7.6 >AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic acetylcholine receptoralpha7-1 protein. Length = 555 Score = 21.0 bits (42), Expect = 2.5 Identities = 8/16 (50%), Positives = 9/16 (56%) Frame = -1 Query: 97 VDSISAPHYHTMTPNH 50 V S PH+HTM H Sbjct: 408 VYSTPGPHHHTMGHGH 423 >AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine receptor protein. Length = 694 Score = 20.2 bits (40), Expect = 4.4 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = -1 Query: 217 LVAPFSGYSSRKGSWMPCRPSLLC 146 LV PF+ Y GSW P +C Sbjct: 238 LVMPFAVYVLVNGSW--SLPGFVC 259 >AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase protein. Length = 1143 Score = 20.2 bits (40), Expect = 4.4 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = +2 Query: 29 AKLIVLNVIRCHGVIVWCR 85 AKL N RC G I W + Sbjct: 116 AKLAWRNATRCIGRIQWSK 134 >DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine receptor alpha3subunit protein. Length = 566 Score = 19.8 bits (39), Expect = 5.8 Identities = 5/8 (62%), Positives = 5/8 (62%) Frame = -2 Query: 231 NVCHHWSH 208 N HHW H Sbjct: 468 NTLHHWHH 475 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 19.8 bits (39), Expect = 5.8 Identities = 9/28 (32%), Positives = 12/28 (42%) Frame = -2 Query: 207 PFPDTVRAKVPGCPVGRPCSVAAPRSRG 124 P P + G PVG P + +A G Sbjct: 1749 PHPGNGHSGTMGPPVGHPTNASAHSRSG 1776 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 19.4 bits (38), Expect = 7.6 Identities = 7/19 (36%), Positives = 9/19 (47%) Frame = -2 Query: 216 WSHPFPDTVRAKVPGCPVG 160 WS P P+ + G VG Sbjct: 1027 WSPPLPELRHGDIQGFNVG 1045 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 19.4 bits (38), Expect = 7.6 Identities = 7/19 (36%), Positives = 9/19 (47%) Frame = -2 Query: 216 WSHPFPDTVRAKVPGCPVG 160 WS P P+ + G VG Sbjct: 1023 WSPPLPELRHGDIQGFNVG 1041 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 82,309 Number of Sequences: 438 Number of extensions: 1516 Number of successful extensions: 9 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 146,343 effective HSP length: 48 effective length of database: 125,319 effective search space used: 4762122 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 37 (19.9 bits)
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