Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0889
         (578 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   1.9  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   1.9  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   2.5  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   4.3  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   5.7  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 197 RTQFYLVPQTPCLALVASISFHRLSSLYYCHTSEYR 304
           RT+ YLV  +  L L A  +FH    +Y  H   Y+
Sbjct: 121 RTKVYLVYCSSALVLAAMTTFH---LIYEAHGFSYK 153


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 197 RTQFYLVPQTPCLALVASISFHRLSSLYYCHTSEYR 304
           RT+ YLV  +  L L A  +FH    +Y  H   Y+
Sbjct: 117 RTKVYLVYCSSALVLAAMTTFH---LIYEAHGFSYK 149


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 412 IGLIDIKTGQLKEPKTGKLVDIKKAAKIGL 323
           I ++DI     +   TG    I +AAK+GL
Sbjct: 402 IAIVDITLDDFRGLCTGNKYPILRAAKLGL 431


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 179 DKVTEPKKVIQRNIEVEPKVKDAKVS 102
           DK+ +P+KV+      EP   D K+S
Sbjct: 90  DKLEKPRKVLPNFKTDEPICPDGKLS 115


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 17/68 (25%), Positives = 26/68 (38%)
 Frame = -1

Query: 503 RCSC*ENYRS*ICNIQCRGC*TSYFTRSCKNRAY*HQNRTIKRT*NR*IGRYKESCKNWA 324
           +C C E +   +CNI    C        C+N      +R      N   G   ++C    
Sbjct: 91  QCICKEGWEGALCNINTDDC----SPNPCRNNGS-CVDRIADFECNCKNGWKGKTCSLKD 145

Query: 323 SRCDRSSC 300
           S CD ++C
Sbjct: 146 SHCDHTTC 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,218
Number of Sequences: 336
Number of extensions: 2216
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)