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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0889
         (578 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0033 - 7585267-7586028                                           34   0.071
08_01_0058 + 388989-389102,389226-389337,389457-389483,389787-38...    33   0.12 
04_03_0850 - 20269047-20270595,20270708-20270751,20271248-202713...    31   0.88 
08_02_1147 - 24688686-24689729,24689875-24690036,24690339-246903...    29   2.7  
03_04_0229 - 19018521-19018927,19019132-19019795                       29   2.7  
07_01_0527 + 3915670-3915821,3916866-3917054,3917477-3917582           28   4.7  
01_06_0246 + 27845898-27846001,27846235-27846237,27846472-278467...    28   4.7  
12_02_0228 + 15903452-15903812,15904153-15904202,15904615-159047...    28   6.2  
08_01_0321 + 2872609-2873027,2873477-2873905,2874743-2874944,287...    28   6.2  
03_02_0404 - 8165211-8165318,8165397-8165733,8166031-8166242,816...    28   6.2  
01_06_1519 + 37942389-37943702,37944142-37944266,37944358-379444...    28   6.2  
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008...    27   8.2  
04_04_1285 - 32382614-32382720,32383032-32383710,32383816-323839...    27   8.2  
02_04_0143 + 20172128-20172355,20172452-20173174                       27   8.2  
01_07_0141 - 41390483-41391448                                         27   8.2  

>05_03_0033 - 7585267-7586028
          Length = 253

 Score = 34.3 bits (75), Expect = 0.071
 Identities = 26/80 (32%), Positives = 35/80 (43%)
 Frame = -1

Query: 245 QPKQDKVFEEPSRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISE 66
           +P  +   E  S   S  K+     TEPK   Q   + EPK  ++K   K  P R S S+
Sbjct: 158 EPNPETKAEPKSEPKSEPKSEPTPQTEPKAESQPEPKTEPK-SESKAEPK--PERKSYSK 214

Query: 65  DPKKDVSKEKLKTEITPTEK 6
              +  SK + KTE  P  K
Sbjct: 215 SKPEPESKPEAKTEPQPESK 234


>08_01_0058 +
           388989-389102,389226-389337,389457-389483,389787-389859,
           389958-390061,390144-390358,390429-390528,390739-390805,
           391628-391716,391810-391948,392057-392157,392921-393088,
           393302-393510
          Length = 505

 Score = 33.5 bits (73), Expect = 0.12
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = -1

Query: 203 VSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSKEKLKTE 24
           + A  A V+    P  + Q NI +   V +   + ++   RPS  ++ + DV + K K E
Sbjct: 414 IKASSAAVEVTPSPPVLAQNNILMTKDVAEGNATSEN--DRPSAVDNMEVDVGENKAKME 471

Query: 23  ITP 15
           +TP
Sbjct: 472 VTP 474


>04_03_0850 -
           20269047-20270595,20270708-20270751,20271248-20271329,
           20274027-20274115
          Length = 587

 Score = 30.7 bits (66), Expect = 0.88
 Identities = 22/75 (29%), Positives = 37/75 (49%)
 Frame = -1

Query: 230 KVFEEPSRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKD 51
           K   +P+ + +  +A   K      V+Q N E + K K  KVSV  +P +  IS   K  
Sbjct: 196 KRMPKPTAVSNTPEAGAIKKLYTSVVVQTNKERDEKNKFGKVSV--LPEKDVISSSVKST 253

Query: 50  VSKEKLKTEITPTEK 6
            +K K++ + +P +K
Sbjct: 254 EAKNKVRNK-SPAKK 267


>08_02_1147 -
           24688686-24689729,24689875-24690036,24690339-24690368,
           24690713-24690860,24691302-24691489
          Length = 523

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 19/70 (27%), Positives = 35/70 (50%)
 Frame = -1

Query: 260 EKKLMQPKQDKVFEEPSRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSR 81
           +K+    ++D   ++P +     +    +  EP++  QR+ + EPK + ++VS  D P R
Sbjct: 272 QKEKKGQREDSEDDKPKKSRKDRRRHDSEDEEPRRKHQRSEDDEPKRRQSEVSGDDEPRR 331

Query: 80  PSISEDPKKD 51
               E PK D
Sbjct: 332 RR-QEMPKHD 340


>03_04_0229 - 19018521-19018927,19019132-19019795
          Length = 356

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = -1

Query: 191 KATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISE 66
           +A+V ++ EP       +E EP+V  + VS +++P +PS+ E
Sbjct: 10  EASVSRIEEPPV-----LESEPEVSTSLVSTRELPPKPSLVE 46


>07_01_0527 + 3915670-3915821,3916866-3917054,3917477-3917582
          Length = 148

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -1

Query: 158 KVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSKEKLKTEITPTE 9
           +++  N++ + K+  A  S+K I  R S     K D+   K   E+TP E
Sbjct: 10  RLLNTNVDGKQKIMFALTSIKGIGRRFSNIACKKADIDMNKRAGELTPEE 59


>01_06_0246 +
           27845898-27846001,27846235-27846237,27846472-27846700,
           27846814-27846968,27847091-27847136,27847233-27847324,
           27847425-27847521,27847649-27847705,27847799-27847927
          Length = 303

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 365 CFRFF*LSCFDVNKPYFYSFL*SNWFSSLYIVYYR 469
           C  +  L  +    PYF  FL  N+F S YI++ R
Sbjct: 95  CLLYLSLIGYKAAVPYFTVFLLINYFMSFYIIFRR 129


>12_02_0228 +
           15903452-15903812,15904153-15904202,15904615-15904713,
           15907146-15907415,15908045-15908125,15909033-15909599,
           15909677-15910053,15910326-15911613
          Length = 1030

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 315 TATSPIFAAFFISTNLPVLGS-FNCPVLMSISPIFT 419
           +A+SPIF     STN P  GS    P   + SP+F+
Sbjct: 874 SASSPIFCNRLTSTNAPPFGSPATSPFSSTSSPVFS 909


>08_01_0321 +
           2872609-2873027,2873477-2873905,2874743-2874944,
           2875909-2875947,2876309-2876354,2877380-2877922,
           2878827-2880847,2880972-2881215,2881642-2881684,
           2881923-2881962,2883580-2883675,2883712-2883759,
           2883964-2884290
          Length = 1498

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 432 VTGLAASTLYITDSGSIIF--LARASLKILVCEVIWDP*IFAVLSS 563
           VTG+ A   Y+ D+G ++     RA L  LV   IWD   + +L S
Sbjct: 528 VTGMPADMNYLADTGWVVTTRARRARLPSLVENDIWDKPSWQILES 573


>03_02_0404 -
           8165211-8165318,8165397-8165733,8166031-8166242,
           8166419-8166526,8166676-8166783,8166884-8166993,
           8167122-8167228,8167349-8167566,8167674-8167841,
           8168033-8168151,8168438-8168525,8168655-8168849,
           8168968-8169271,8169363-8169480,8170034-8170133,
           8170283-8170468
          Length = 861

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -2

Query: 388 GQLKEPKTGKLVDIKKAAKIGLVAVIAA 305
           G +++PK G L D+ KA K+   A+IAA
Sbjct: 331 GMVRQPKWGHLRDVHKAIKLCEPALIAA 358


>01_06_1519 +
           37942389-37943702,37944142-37944266,37944358-37944499,
           37944602-37944848,37946139-37946196,37947629-37947913,
           37947988-37948120
          Length = 767

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
 Frame = -1

Query: 191 KATVDKVTEPKKVIQRNIEVEPKVKDA------KVSVKDIPSRP--SISEDPKKDVSKEK 36
           KA V+   E  K  +   E EPK ++       K  V    + P  + +E+PK + S E+
Sbjct: 119 KAKVEAAVEETKAEETKAEEEPKAEEPAKEEEPKAEVAAAAAAPPEAGTEEPKAEASSEE 178

Query: 35  LKTE 24
            KTE
Sbjct: 179 AKTE 182


>06_03_1075 +
           27399279-27399376,27399449-27399555,27400791-27400898,
           27401763-27401860,27401983-27402033,27402137-27402228,
           27402360-27402459,27402765-27402884,27402977-27403045,
           27403299-27403345,27403428-27403483,27404760-27404800,
           27405155-27405260,27406728-27406860,27406937-27407357
          Length = 548

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 108 FSIFHFWFYFNITLNYFFRLCNLVNSRFISGHNSTWF 218
           F  + F+  F ++L+YF  + N + SRF+SG  +T F
Sbjct: 72  FPGYSFFLVF-LSLHYFVHIQNYLFSRFLSGAMATRF 107


>04_04_1285 -
           32382614-32382720,32383032-32383710,32383816-32383926,
           32384007-32384065,32384163-32384271,32384387-32384575,
           32384650-32385476,32385501-32385633
          Length = 737

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -2

Query: 556 RTAKIQGSQITSQTNIFKDALAKKI 482
           R AKI  + I  QTN++K+A ++K+
Sbjct: 351 RAAKIPRNYIIDQTNVYKNARSRKL 375


>02_04_0143 + 20172128-20172355,20172452-20173174
          Length = 316

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/48 (22%), Positives = 25/48 (52%)
 Frame = -1

Query: 161 KKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSKEKLKTEIT 18
           ++V +    V+P       +    PS PS ++D +++ SKE+   +++
Sbjct: 261 QEVAEEEKRVDPDSVQVAAAASSTPSPPSSADDDEEEKSKEEAAADVS 308


>01_07_0141 - 41390483-41391448
          Length = 321

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +3

Query: 345 FISTNLPVLGSFNCPVLMSISPIFTASCKVTGLAASTLYITDSGSII 485
           F+S  +P L   + P+L ++ P F  S    G+  S    T SG+++
Sbjct: 160 FMSYVIPFLERTHAPLLANLYPYFIYSYNPGGMDISFALFTASGAVV 206


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,321,067
Number of Sequences: 37544
Number of extensions: 198953
Number of successful extensions: 701
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 673
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1352600424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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