Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0889
(578 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6477| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_6220| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0089) 31 0.51
SB_3323| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_39061| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_39987| Best HMM Match : FtsL (HMM E-Value=0.4) 30 1.2
SB_56887| Best HMM Match : TolA (HMM E-Value=0.66) 30 1.6
SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1) 29 2.1
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 29 2.1
SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 29 2.1
SB_3915| Best HMM Match : IF2_N (HMM E-Value=4) 29 2.7
SB_59041| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_47219| Best HMM Match : DUF414 (HMM E-Value=1.7) 29 3.6
SB_5808| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_2130| Best HMM Match : fn2 (HMM E-Value=2.7e-15) 28 4.8
SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_19201| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_972| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_34008| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_33494| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_24364| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
>SB_6477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 354
Score = 31.5 bits (68), Expect = 0.51
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = -1
Query: 173 VTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSKEKLKTEITPTE 9
+ E + + + IEV PKV KVS K I + P +E K+ +TE++P E
Sbjct: 244 IREDAEGLPKEIEVSPKV--TKVSPKQIETSPKEAEVLSKENEISMEETEVSPEE 296
>SB_6220| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0089)
Length = 374
Score = 31.5 bits (68), Expect = 0.51
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -2
Query: 451 EAAKPVT-LQEAVKIGLIDIKTGQLKEPKTGKLVDIKKAAKIGLVAVIAAP 302
+A K ++ L+EAV G D KTG ++ KLV + AA++G AV P
Sbjct: 263 KAEKTISMLREAVNRGEKD-KTGLQSRLRSNKLVSVSSAARVGSTAVTRPP 312
>SB_3323| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 872
Score = 30.7 bits (66), Expect = 0.90
Identities = 18/74 (24%), Positives = 36/74 (48%)
Frame = -1
Query: 260 EKKLMQPKQDKVFEEPSRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSR 81
++ L++ + DK EE + ++ A + KKVI K ++ + V++I +R
Sbjct: 45 QQMLVEKEHDKYNEEKQQANQSEMALSEVKDMHKKVIDDLNHNRKKARELRTEVENIAAR 104
Query: 80 PSISEDPKKDVSKE 39
E+ K+DV +
Sbjct: 105 LHYMEEAKEDVRSD 118
>SB_39061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2362
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 179 QQSLYQRTQFYLVPQTPCLALVASISFHRLSS 274
+ +L Y + QT C A++AS SFH+ +S
Sbjct: 1556 ENTLLNDRDIYFISQTSCRAVIASTSFHQKTS 1587
>SB_39987| Best HMM Match : FtsL (HMM E-Value=0.4)
Length = 573
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = -1
Query: 251 LMQPKQDKVFEEPSRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSR--P 78
LM+ + KV +V+ P QRN + + + + + D P P
Sbjct: 316 LMRLRHQKVDPSQEELVAKSVTKPGTARMPSTARQRNQQTQSRATAGGIKM-DTPKENTP 374
Query: 77 SISEDPKKDVSKEKLKTE 24
++ E P K +++EK+ T+
Sbjct: 375 AVMEQPSKTLAREKVNTQ 392
>SB_56887| Best HMM Match : TolA (HMM E-Value=0.66)
Length = 404
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = -1
Query: 182 VDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSKEKLKTEITPT 12
++ TEPK+V+Q ++++ + + D P SE+P V + +L +T T
Sbjct: 289 IEDATEPKEVVQDTVDIK-----EEEDIPDETEGPEKSEEPPVSVQERELSRIVTST 340
>SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1)
Length = 366
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = -1
Query: 245 QPKQDKVFEEPSRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISE 66
+PKQ++ FEE V+ + KV P + + +PK ++ V K P + E
Sbjct: 144 EPKQEEPFEEQKEAVAEE----SKVDAPVAIDTSGVYEKPK-QEQPVEEKSKQEEP-VEE 197
Query: 65 DPK-KDVSKEKLKTEIT 18
+PK K++ E+ KT T
Sbjct: 198 EPKQKELVGEEPKTRRT 214
Score = 28.3 bits (60), Expect = 4.8
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = -1
Query: 260 EKKLMQP-KQDKVFEEPSRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPS 84
++K QP +++ EEP K V++ EPK+ + +E EPK ++ V++ P
Sbjct: 4 KQKQEQPVEEESKQEEPIEEGPKQKELVEE--EPKQ--EEQVEEEPKQEEP---VEEEPK 56
Query: 83 RPS-ISEDPKKDVSKEKLKTEITPTEKK 3
+ + E+PK++ E+ + P E+K
Sbjct: 57 QEEPVKEEPKQEEPVEEEPKQEEPVEQK 84
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 29.5 bits (63), Expect = 2.1
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Frame = -1
Query: 260 EKKLMQPKQDKVFEEP--SRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIP 87
E+K + +KV EE + ++ + T ++V +PKK + E +P + V K++P
Sbjct: 5380 EEKELPVSAEKVVEEKPLEKQITRKEKTAEEV-KPKKGKPMDREAKPLEEKPLVEEKELP 5438
Query: 86 --SRPSISEDP--KKDVSKEKLKTEITP-TEK 6
+ ++ E P K KEK E+ P TEK
Sbjct: 5439 VSAEKAVEEKPLEKPITRKEKKVEEVRPKTEK 5470
Score = 29.5 bits (63), Expect = 2.1
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Frame = -1
Query: 260 EKKLMQPKQDKVFEEP-SRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIP- 87
EK+L + V E+P + ++ + V++V +PKK E +P + V K++P
Sbjct: 5487 EKELTVSVEKAVEEKPLEKPITRKEKKVEEV-KPKKEKPTEREAKPLEEKPLVEEKELPV 5545
Query: 86 -SRPSISEDP--KKDVSKEKLKTEITPTEKK 3
+ ++ E P K KEK E+ P ++K
Sbjct: 5546 SAEKAVEEKPLEKPIARKEKKVEEVQPKKEK 5576
Score = 28.7 bits (61), Expect = 3.6
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Frame = -1
Query: 260 EKKLMQPKQDKVFEEP-SRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIP- 87
EK+L + V EEP + ++ + V++V +PKK +P + V K++P
Sbjct: 5328 EKELPVSAEKAVEEEPLEKPITGKEKKVEEV-KPKKEKPTERRAKPLEEKPLVEEKELPV 5386
Query: 86 -SRPSISEDP--KKDVSKEKLKTEITPTEKK 3
+ + E P K+ KEK E+ P + K
Sbjct: 5387 SAEKVVEEKPLEKQITRKEKTAEEVKPKKGK 5417
Score = 28.7 bits (61), Expect = 3.6
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Frame = -1
Query: 260 EKKLMQPKQDKVFEEP-SRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIP- 87
EK+L + V E+P + ++ + V++V +PKK E +P+ V K++P
Sbjct: 5752 EKELTVSVEKAVEEKPLEKPITRKEKKVEEV-KPKKEKPTEREAKPREVKPFVEEKELPV 5810
Query: 86 -SRPSISEDP--KKDVSKEKLKTEITPTEKK 3
+ ++ E P K KEK E+ P ++K
Sbjct: 5811 SAGQAVEEKPLEKPIARKEKKVEEVKPKKEK 5841
Score = 28.7 bits (61), Expect = 3.6
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Frame = -1
Query: 260 EKKLMQPKQDKVFEEPSRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIP-- 87
EK+L + V E+P A K + +PKK E +P K V K++P
Sbjct: 5857 EKELRVSVEKAVEEKPLEKPIARKEKKVEEVKPKKEKPTEREAKPLDKKPLVEEKELPVS 5916
Query: 86 SRPSISE-----DPKKDVSKEKLKTEITPTEKK 3
+ ++ E KK V ++ L+ IT EKK
Sbjct: 5917 AEKAVEEKELPVSAKKAVEEKPLEKPITREEKK 5949
>SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1338
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = -1
Query: 203 VSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSK 42
VS K TVD + E Q + EP++K K+ V+D P S E K +V++
Sbjct: 161 VSFPKDTVDAICEAADRKQLRAKEEPQIK-RKLEVEDGPDDQSPKESVKMEVNE 213
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = -1
Query: 257 KKLMQPKQDKVFEEPSRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRP 78
+K ++ K K+ EE + + + D + + +RN E+E + D + VKD+ +
Sbjct: 861 RKELEEKYTKLVEEKNLLFQDFQREQDACADAE---ERNAELEGRKADLEAQVKDMLEQL 917
Query: 77 SISEDPKKDVS--KEKLKTEIT 18
E+ ++S K KL+ EI+
Sbjct: 918 EDEEEASAELSSVKHKLEGEIS 939
>SB_3915| Best HMM Match : IF2_N (HMM E-Value=4)
Length = 220
Score = 29.1 bits (62), Expect = 2.7
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = -1
Query: 254 KLMQPKQDK--VFEEPSRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSR 81
K QPK + V EE +++V K ++ K ++ +V PK ++ KV +
Sbjct: 121 KKQQPKLETPPVVEEKAKVVVEAKEEKPEIIAAPK-LEVTEKVTPKAEEPKVESSTVEKV 179
Query: 80 PSISEDPKKDVSKEKLKTE-ITPTEKK 3
+ PK ++ K+ + + + TE K
Sbjct: 180 EVVKSQPKVEILKKATEVKSVVKTEAK 206
>SB_59041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 179 QQSLYQRTQFYLVPQTPCLALVASISFHRLSS 274
+ +L Y + QT C A +AS SFH+ +S
Sbjct: 67 ENTLLNDRDIYFISQTSCRAEIASTSFHQKTS 98
>SB_47219| Best HMM Match : DUF414 (HMM E-Value=1.7)
Length = 704
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Frame = -1
Query: 257 KKLMQPKQ---DKVFEEPSRIVSADKATVDKVTEPKKVIQRNIEVEP---KVKDAKVSVK 96
K++M+ ++ D+ E + +A +A D+ E KK ++ + EP K +D+K S+K
Sbjct: 605 KRMMEDRKKQTDETAVESPDVKTASEA--DQPVEAKKPADKSAKEEPKDAKAEDSKESLK 662
Query: 95 DIPSRPSISEDPKKDVSKE 39
P + S + PK +K+
Sbjct: 663 SKPFQLSKAGQPKATQAKQ 681
>SB_5808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -1
Query: 167 EPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSKEKLKTEITP 15
+ KK + ++E K ++ K + I + S + + KK+ KE+ K+E P
Sbjct: 262 QSKKTEAKQEKIEKKSQEQKPKKEKIHEKESATSNEKKEQEKERKKSEGKP 312
>SB_2130| Best HMM Match : fn2 (HMM E-Value=2.7e-15)
Length = 430
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -1
Query: 161 KKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSKEKLKTEITPTEKK 3
+K+ N + ++KD S ++P R + S D + VS ++ + T KK
Sbjct: 91 RKIHSSNTNIRKRIKDGDASKSNVPQR-TTSHDQVRKVSGQRRHSTYTSQVKK 142
>SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3293
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = -1
Query: 245 QPKQDKVFEEPSRIVSADKATVDKVTEPKKVIQRNI-EVEPKVKDAKV--SVKD-IPSRP 78
+ +++ FEE + +S D +EP +VIQ+++ P V + +V +++D +P P
Sbjct: 1042 EQEKEVFFEELFKKMSEDSPVKPASSEPLEVIQQDVLPPPPPVSEDEVFTALEDSLPPPP 1101
Query: 77 SISEDPKKDVSKEKLKTEITPTE 9
+S+D + S + L P E
Sbjct: 1102 PVSDD--LETSHDNLPLPTPPRE 1122
>SB_19201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1095
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = -1
Query: 197 ADKATVDKVTEPKKVIQRNI-EVEPKVKDAKVSVKDIP-SRPSISEDPKKDVSKEKLK 30
+DK+ D + EP K+ +NI + P+ + S+ D+P +RP+ + K + LK
Sbjct: 539 SDKSLADLLQEPSKLSGQNISQAGPQEAPSAASICDVPTTRPAEANTGSKSLVIRFLK 596
>SB_972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 378
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 5/43 (11%)
Frame = +2
Query: 461 YYRFRIYNFLSKSIFEDISL*GDLGSLNFCG-----SFIKQKV 574
Y +F I N+L + +F+ +S+ DLG L+F G ++I++KV
Sbjct: 248 YDKFYIINYLDEHVFDILSIKNDLG-LDFYGQVKIVNYIRKKV 289
>SB_34008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = -1
Query: 212 SRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSKEKL 33
S+ S+ K + ++PK E+ + +KD+ SR ++SEDP S L
Sbjct: 825 SKAKSSSKVKGKRNSKPKITHPNQGEILGLASNLDSELKDVKSRWTLSEDPMFSTSHSVL 884
Query: 32 KT 27
T
Sbjct: 885 ST 886
>SB_33494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1097
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 95 DIPSRPSISEDPKKDVSKEKLKTEITPTEKK 3
+ P +P +D S E+ + E TPTEKK
Sbjct: 716 ETPRKPEPEVTQDRDESDEEPQVEFTPTEKK 746
>SB_24364| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 27.5 bits (58), Expect = 8.4
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -1
Query: 194 DKA--TVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSKEKLKTEI 21
DKA T D + N EVE K+ V P+ +ISED ++D+ ++ +K E
Sbjct: 540 DKASTTNDDDQDKASTTNDNKEVEEIEKNPPVE----PAEYTISEDKREDMFRQIIKEER 595
Query: 20 TPT 12
TP+
Sbjct: 596 TPS 598
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,882,901
Number of Sequences: 59808
Number of extensions: 261584
Number of successful extensions: 1008
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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