BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0889 (578 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_6477| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51 SB_6220| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0089) 31 0.51 SB_3323| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90 SB_39061| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2 SB_39987| Best HMM Match : FtsL (HMM E-Value=0.4) 30 1.2 SB_56887| Best HMM Match : TolA (HMM E-Value=0.66) 30 1.6 SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1) 29 2.1 SB_29786| Best HMM Match : I-set (HMM E-Value=0) 29 2.1 SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1 SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 29 2.1 SB_3915| Best HMM Match : IF2_N (HMM E-Value=4) 29 2.7 SB_59041| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6 SB_47219| Best HMM Match : DUF414 (HMM E-Value=1.7) 29 3.6 SB_5808| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8 SB_2130| Best HMM Match : fn2 (HMM E-Value=2.7e-15) 28 4.8 SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3 SB_19201| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3 SB_972| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3 SB_34008| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4 SB_33494| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4 SB_24364| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4 >SB_6477| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 354 Score = 31.5 bits (68), Expect = 0.51 Identities = 19/55 (34%), Positives = 29/55 (52%) Frame = -1 Query: 173 VTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSKEKLKTEITPTE 9 + E + + + IEV PKV KVS K I + P +E K+ +TE++P E Sbjct: 244 IREDAEGLPKEIEVSPKV--TKVSPKQIETSPKEAEVLSKENEISMEETEVSPEE 296 >SB_6220| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0089) Length = 374 Score = 31.5 bits (68), Expect = 0.51 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Frame = -2 Query: 451 EAAKPVT-LQEAVKIGLIDIKTGQLKEPKTGKLVDIKKAAKIGLVAVIAAP 302 +A K ++ L+EAV G D KTG ++ KLV + AA++G AV P Sbjct: 263 KAEKTISMLREAVNRGEKD-KTGLQSRLRSNKLVSVSSAARVGSTAVTRPP 312 >SB_3323| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 872 Score = 30.7 bits (66), Expect = 0.90 Identities = 18/74 (24%), Positives = 36/74 (48%) Frame = -1 Query: 260 EKKLMQPKQDKVFEEPSRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSR 81 ++ L++ + DK EE + ++ A + KKVI K ++ + V++I +R Sbjct: 45 QQMLVEKEHDKYNEEKQQANQSEMALSEVKDMHKKVIDDLNHNRKKARELRTEVENIAAR 104 Query: 80 PSISEDPKKDVSKE 39 E+ K+DV + Sbjct: 105 LHYMEEAKEDVRSD 118 >SB_39061| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2362 Score = 30.3 bits (65), Expect = 1.2 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +2 Query: 179 QQSLYQRTQFYLVPQTPCLALVASISFHRLSS 274 + +L Y + QT C A++AS SFH+ +S Sbjct: 1556 ENTLLNDRDIYFISQTSCRAVIASTSFHQKTS 1587 >SB_39987| Best HMM Match : FtsL (HMM E-Value=0.4) Length = 573 Score = 30.3 bits (65), Expect = 1.2 Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 2/78 (2%) Frame = -1 Query: 251 LMQPKQDKVFEEPSRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSR--P 78 LM+ + KV +V+ P QRN + + + + + D P P Sbjct: 316 LMRLRHQKVDPSQEELVAKSVTKPGTARMPSTARQRNQQTQSRATAGGIKM-DTPKENTP 374 Query: 77 SISEDPKKDVSKEKLKTE 24 ++ E P K +++EK+ T+ Sbjct: 375 AVMEQPSKTLAREKVNTQ 392 >SB_56887| Best HMM Match : TolA (HMM E-Value=0.66) Length = 404 Score = 29.9 bits (64), Expect = 1.6 Identities = 15/57 (26%), Positives = 29/57 (50%) Frame = -1 Query: 182 VDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSKEKLKTEITPT 12 ++ TEPK+V+Q ++++ + + D P SE+P V + +L +T T Sbjct: 289 IEDATEPKEVVQDTVDIK-----EEEDIPDETEGPEKSEEPPVSVQERELSRIVTST 340 >SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1) Length = 366 Score = 29.5 bits (63), Expect = 2.1 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%) Frame = -1 Query: 245 QPKQDKVFEEPSRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISE 66 +PKQ++ FEE V+ + KV P + + +PK ++ V K P + E Sbjct: 144 EPKQEEPFEEQKEAVAEE----SKVDAPVAIDTSGVYEKPK-QEQPVEEKSKQEEP-VEE 197 Query: 65 DPK-KDVSKEKLKTEIT 18 +PK K++ E+ KT T Sbjct: 198 EPKQKELVGEEPKTRRT 214 Score = 28.3 bits (60), Expect = 4.8 Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 2/88 (2%) Frame = -1 Query: 260 EKKLMQP-KQDKVFEEPSRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPS 84 ++K QP +++ EEP K V++ EPK+ + +E EPK ++ V++ P Sbjct: 4 KQKQEQPVEEESKQEEPIEEGPKQKELVEE--EPKQ--EEQVEEEPKQEEP---VEEEPK 56 Query: 83 RPS-ISEDPKKDVSKEKLKTEITPTEKK 3 + + E+PK++ E+ + P E+K Sbjct: 57 QEEPVKEEPKQEEPVEEEPKQEEPVEQK 84 >SB_29786| Best HMM Match : I-set (HMM E-Value=0) Length = 6300 Score = 29.5 bits (63), Expect = 2.1 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 7/92 (7%) Frame = -1 Query: 260 EKKLMQPKQDKVFEEP--SRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIP 87 E+K + +KV EE + ++ + T ++V +PKK + E +P + V K++P Sbjct: 5380 EEKELPVSAEKVVEEKPLEKQITRKEKTAEEV-KPKKGKPMDREAKPLEEKPLVEEKELP 5438 Query: 86 --SRPSISEDP--KKDVSKEKLKTEITP-TEK 6 + ++ E P K KEK E+ P TEK Sbjct: 5439 VSAEKAVEEKPLEKPITRKEKKVEEVRPKTEK 5470 Score = 29.5 bits (63), Expect = 2.1 Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 5/91 (5%) Frame = -1 Query: 260 EKKLMQPKQDKVFEEP-SRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIP- 87 EK+L + V E+P + ++ + V++V +PKK E +P + V K++P Sbjct: 5487 EKELTVSVEKAVEEKPLEKPITRKEKKVEEV-KPKKEKPTEREAKPLEEKPLVEEKELPV 5545 Query: 86 -SRPSISEDP--KKDVSKEKLKTEITPTEKK 3 + ++ E P K KEK E+ P ++K Sbjct: 5546 SAEKAVEEKPLEKPIARKEKKVEEVQPKKEK 5576 Score = 28.7 bits (61), Expect = 3.6 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 5/91 (5%) Frame = -1 Query: 260 EKKLMQPKQDKVFEEP-SRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIP- 87 EK+L + V EEP + ++ + V++V +PKK +P + V K++P Sbjct: 5328 EKELPVSAEKAVEEEPLEKPITGKEKKVEEV-KPKKEKPTERRAKPLEEKPLVEEKELPV 5386 Query: 86 -SRPSISEDP--KKDVSKEKLKTEITPTEKK 3 + + E P K+ KEK E+ P + K Sbjct: 5387 SAEKVVEEKPLEKQITRKEKTAEEVKPKKGK 5417 Score = 28.7 bits (61), Expect = 3.6 Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 5/91 (5%) Frame = -1 Query: 260 EKKLMQPKQDKVFEEP-SRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIP- 87 EK+L + V E+P + ++ + V++V +PKK E +P+ V K++P Sbjct: 5752 EKELTVSVEKAVEEKPLEKPITRKEKKVEEV-KPKKEKPTEREAKPREVKPFVEEKELPV 5810 Query: 86 -SRPSISEDP--KKDVSKEKLKTEITPTEKK 3 + ++ E P K KEK E+ P ++K Sbjct: 5811 SAGQAVEEKPLEKPIARKEKKVEEVKPKKEK 5841 Score = 28.7 bits (61), Expect = 3.6 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 7/93 (7%) Frame = -1 Query: 260 EKKLMQPKQDKVFEEPSRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIP-- 87 EK+L + V E+P A K + +PKK E +P K V K++P Sbjct: 5857 EKELRVSVEKAVEEKPLEKPIARKEKKVEEVKPKKEKPTEREAKPLDKKPLVEEKELPVS 5916 Query: 86 SRPSISE-----DPKKDVSKEKLKTEITPTEKK 3 + ++ E KK V ++ L+ IT EKK Sbjct: 5917 AEKAVEEKELPVSAKKAVEEKPLEKPITREEKK 5949 >SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1338 Score = 29.5 bits (63), Expect = 2.1 Identities = 19/54 (35%), Positives = 28/54 (51%) Frame = -1 Query: 203 VSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSK 42 VS K TVD + E Q + EP++K K+ V+D P S E K +V++ Sbjct: 161 VSFPKDTVDAICEAADRKQLRAKEEPQIK-RKLEVEDGPDDQSPKESVKMEVNE 213 >SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) Length = 1997 Score = 29.5 bits (63), Expect = 2.1 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 2/82 (2%) Frame = -1 Query: 257 KKLMQPKQDKVFEEPSRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRP 78 +K ++ K K+ EE + + + D + + +RN E+E + D + VKD+ + Sbjct: 861 RKELEEKYTKLVEEKNLLFQDFQREQDACADAE---ERNAELEGRKADLEAQVKDMLEQL 917 Query: 77 SISEDPKKDVS--KEKLKTEIT 18 E+ ++S K KL+ EI+ Sbjct: 918 EDEEEASAELSSVKHKLEGEIS 939 >SB_3915| Best HMM Match : IF2_N (HMM E-Value=4) Length = 220 Score = 29.1 bits (62), Expect = 2.7 Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 3/87 (3%) Frame = -1 Query: 254 KLMQPKQDK--VFEEPSRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSR 81 K QPK + V EE +++V K ++ K ++ +V PK ++ KV + Sbjct: 121 KKQQPKLETPPVVEEKAKVVVEAKEEKPEIIAAPK-LEVTEKVTPKAEEPKVESSTVEKV 179 Query: 80 PSISEDPKKDVSKEKLKTE-ITPTEKK 3 + PK ++ K+ + + + TE K Sbjct: 180 EVVKSQPKVEILKKATEVKSVVKTEAK 206 >SB_59041| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 350 Score = 28.7 bits (61), Expect = 3.6 Identities = 12/32 (37%), Positives = 18/32 (56%) Frame = +2 Query: 179 QQSLYQRTQFYLVPQTPCLALVASISFHRLSS 274 + +L Y + QT C A +AS SFH+ +S Sbjct: 67 ENTLLNDRDIYFISQTSCRAEIASTSFHQKTS 98 >SB_47219| Best HMM Match : DUF414 (HMM E-Value=1.7) Length = 704 Score = 28.7 bits (61), Expect = 3.6 Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Frame = -1 Query: 257 KKLMQPKQ---DKVFEEPSRIVSADKATVDKVTEPKKVIQRNIEVEP---KVKDAKVSVK 96 K++M+ ++ D+ E + +A +A D+ E KK ++ + EP K +D+K S+K Sbjct: 605 KRMMEDRKKQTDETAVESPDVKTASEA--DQPVEAKKPADKSAKEEPKDAKAEDSKESLK 662 Query: 95 DIPSRPSISEDPKKDVSKE 39 P + S + PK +K+ Sbjct: 663 SKPFQLSKAGQPKATQAKQ 681 >SB_5808| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 473 Score = 28.3 bits (60), Expect = 4.8 Identities = 14/51 (27%), Positives = 27/51 (52%) Frame = -1 Query: 167 EPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSKEKLKTEITP 15 + KK + ++E K ++ K + I + S + + KK+ KE+ K+E P Sbjct: 262 QSKKTEAKQEKIEKKSQEQKPKKEKIHEKESATSNEKKEQEKERKKSEGKP 312 >SB_2130| Best HMM Match : fn2 (HMM E-Value=2.7e-15) Length = 430 Score = 28.3 bits (60), Expect = 4.8 Identities = 14/53 (26%), Positives = 26/53 (49%) Frame = -1 Query: 161 KKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSKEKLKTEITPTEKK 3 +K+ N + ++KD S ++P R + S D + VS ++ + T KK Sbjct: 91 RKIHSSNTNIRKRIKDGDASKSNVPQR-TTSHDQVRKVSGQRRHSTYTSQVKK 142 >SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 3293 Score = 27.9 bits (59), Expect = 6.3 Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 4/83 (4%) Frame = -1 Query: 245 QPKQDKVFEEPSRIVSADKATVDKVTEPKKVIQRNI-EVEPKVKDAKV--SVKD-IPSRP 78 + +++ FEE + +S D +EP +VIQ+++ P V + +V +++D +P P Sbjct: 1042 EQEKEVFFEELFKKMSEDSPVKPASSEPLEVIQQDVLPPPPPVSEDEVFTALEDSLPPPP 1101 Query: 77 SISEDPKKDVSKEKLKTEITPTE 9 +S+D + S + L P E Sbjct: 1102 PVSDD--LETSHDNLPLPTPPRE 1122 >SB_19201| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1095 Score = 27.9 bits (59), Expect = 6.3 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Frame = -1 Query: 197 ADKATVDKVTEPKKVIQRNI-EVEPKVKDAKVSVKDIP-SRPSISEDPKKDVSKEKLK 30 +DK+ D + EP K+ +NI + P+ + S+ D+P +RP+ + K + LK Sbjct: 539 SDKSLADLLQEPSKLSGQNISQAGPQEAPSAASICDVPTTRPAEANTGSKSLVIRFLK 596 >SB_972| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 378 Score = 27.9 bits (59), Expect = 6.3 Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 5/43 (11%) Frame = +2 Query: 461 YYRFRIYNFLSKSIFEDISL*GDLGSLNFCG-----SFIKQKV 574 Y +F I N+L + +F+ +S+ DLG L+F G ++I++KV Sbjct: 248 YDKFYIINYLDEHVFDILSIKNDLG-LDFYGQVKIVNYIRKKV 289 >SB_34008| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1039 Score = 27.5 bits (58), Expect = 8.4 Identities = 17/62 (27%), Positives = 28/62 (45%) Frame = -1 Query: 212 SRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSKEKL 33 S+ S+ K + ++PK E+ + +KD+ SR ++SEDP S L Sbjct: 825 SKAKSSSKVKGKRNSKPKITHPNQGEILGLASNLDSELKDVKSRWTLSEDPMFSTSHSVL 884 Query: 32 KT 27 T Sbjct: 885 ST 886 >SB_33494| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1097 Score = 27.5 bits (58), Expect = 8.4 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -1 Query: 95 DIPSRPSISEDPKKDVSKEKLKTEITPTEKK 3 + P +P +D S E+ + E TPTEKK Sbjct: 716 ETPRKPEPEVTQDRDESDEEPQVEFTPTEKK 746 >SB_24364| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 648 Score = 27.5 bits (58), Expect = 8.4 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Frame = -1 Query: 194 DKA--TVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKKDVSKEKLKTEI 21 DKA T D + N EVE K+ V P+ +ISED ++D+ ++ +K E Sbjct: 540 DKASTTNDDDQDKASTTNDNKEVEEIEKNPPVE----PAEYTISEDKREDMFRQIIKEER 595 Query: 20 TPT 12 TP+ Sbjct: 596 TPS 598 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,882,901 Number of Sequences: 59808 Number of extensions: 261584 Number of successful extensions: 1008 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 929 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1007 length of database: 16,821,457 effective HSP length: 78 effective length of database: 12,156,433 effective search space used: 1385833362 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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