BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0889 (578 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY095933-1|AAM34435.1| 505|Anopheles gambiae cytochrome P450 pr... 25 2.3 AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 23 5.4 U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 23 9.5 >AY095933-1|AAM34435.1| 505|Anopheles gambiae cytochrome P450 protein. Length = 505 Score = 24.6 bits (51), Expect = 2.3 Identities = 16/60 (26%), Positives = 26/60 (43%) Frame = -1 Query: 233 DKVFEEPSRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKK 54 D+V E R+ + T+P KV N+ +EP + + I SI DP++ Sbjct: 363 DQVINETLRMYPPVPQLIRVTTQPYKVEGANVSLEPDTM-LMIPIYAIHHDASIYPDPER 421 >AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. Length = 1201 Score = 23.4 bits (48), Expect = 5.4 Identities = 19/81 (23%), Positives = 34/81 (41%) Frame = -1 Query: 260 EKKLMQPKQDKVFEEPSRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSR 81 E +L + ++ + R S DK + E +K R + +KDAK V Sbjct: 229 ETELKETRKQLEELDGQRKSSGDKQLL-LTQEIQKAQDRLKNAQKALKDAKKDVVTAKDE 287 Query: 80 PSISEDPKKDVSKEKLKTEIT 18 S+ + + +EK K ++T Sbjct: 288 KSVLATEHQQLLREKTKLDLT 308 >U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse transcriptase protein. Length = 1049 Score = 22.6 bits (46), Expect = 9.5 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +2 Query: 446 SLYIVYYRFRIYNFLSK 496 SLY Y RFR +LSK Sbjct: 442 SLYCSYNRFRYRRYLSK 458 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 469,877 Number of Sequences: 2352 Number of extensions: 8329 Number of successful extensions: 11 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 11 length of database: 563,979 effective HSP length: 61 effective length of database: 420,507 effective search space used: 55086417 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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