BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0887 (524 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 4e-47 SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 4e-47 SB_56| Best HMM Match : Actin (HMM E-Value=0) 184 4e-47 SB_56628| Best HMM Match : Actin (HMM E-Value=0) 184 4e-47 SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 4e-47 SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 4e-27 SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 1e-20 SB_54| Best HMM Match : Actin (HMM E-Value=0) 87 1e-17 SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 70 1e-12 SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 64 7e-11 SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 1e-09 SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 5e-07 SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 1e-05 SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04 SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 38 0.004 SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.082 SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44 SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.44 SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 31 0.77 SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0 SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0 SB_29730| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3 SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 1.3 SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.3 SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8 SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8 SB_21074| Best HMM Match : NadA (HMM E-Value=2) 29 1.8 SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 29 1.8 SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8 SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 29 1.8 SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8 SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 29 2.3 SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 2.3 SB_4468| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1 SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1 SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1 SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2 SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2 SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 27 7.2 SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 27 9.5 SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 27 9.5 SB_9298| Best HMM Match : rve (HMM E-Value=4.8e-35) 27 9.5 SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 27 9.5 SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5 SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5 SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 27 9.5 SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 27 9.5 SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 27 9.5 SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 27 9.5 >SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 376 Score = 184 bits (448), Expect = 4e-47 Identities = 84/85 (98%), Positives = 85/85 (100%) Frame = +3 Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117 Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509 EKMTQIMFETFN+PAMYVAIQAVLS Sbjct: 118 EKMTQIMFETFNSPAMYVAIQAVLS 142 Score = 119 bits (287), Expect = 1e-27 Identities = 54/62 (87%), Positives = 59/62 (95%) Frame = +1 Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264 M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ + Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 265 AK 270 +K Sbjct: 61 SK 62 >SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 375 Score = 184 bits (448), Expect = 4e-47 Identities = 84/85 (98%), Positives = 85/85 (100%) Frame = +3 Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR Sbjct: 57 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 116 Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509 EKMTQIMFETFN+PAMYVAIQAVLS Sbjct: 117 EKMTQIMFETFNSPAMYVAIQAVLS 141 Score = 116 bits (280), Expect = 9e-27 Identities = 52/60 (86%), Positives = 58/60 (96%) Frame = +1 Query: 91 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270 +++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ ++K Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 >SB_56| Best HMM Match : Actin (HMM E-Value=0) Length = 375 Score = 184 bits (448), Expect = 4e-47 Identities = 84/85 (98%), Positives = 85/85 (100%) Frame = +3 Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR Sbjct: 57 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 116 Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509 EKMTQIMFETFN+PAMYVAIQAVLS Sbjct: 117 EKMTQIMFETFNSPAMYVAIQAVLS 141 Score = 118 bits (283), Expect = 4e-27 Identities = 53/60 (88%), Positives = 58/60 (96%) Frame = +1 Query: 91 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270 ++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ ++K Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 >SB_56628| Best HMM Match : Actin (HMM E-Value=0) Length = 376 Score = 184 bits (448), Expect = 4e-47 Identities = 84/85 (98%), Positives = 85/85 (100%) Frame = +3 Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117 Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509 EKMTQIMFETFN+PAMYVAIQAVLS Sbjct: 118 EKMTQIMFETFNSPAMYVAIQAVLS 142 Score = 124 bits (298), Expect = 6e-29 Identities = 55/62 (88%), Positives = 60/62 (96%) Frame = +1 Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264 MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ + Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 265 AK 270 +K Sbjct: 61 SK 62 >SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 349 Score = 184 bits (448), Expect = 4e-47 Identities = 84/85 (98%), Positives = 85/85 (100%) Frame = +3 Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117 Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509 EKMTQIMFETFN+PAMYVAIQAVLS Sbjct: 118 EKMTQIMFETFNSPAMYVAIQAVLS 142 Score = 119 bits (287), Expect = 1e-27 Identities = 52/62 (83%), Positives = 59/62 (95%) Frame = +1 Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264 M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ + Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60 Query: 265 AK 270 +K Sbjct: 61 SK 62 >SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 338 Score = 118 bits (283), Expect = 4e-27 Identities = 52/60 (86%), Positives = 58/60 (96%) Frame = +1 Query: 91 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270 D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ ++K Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61 Score = 69.7 bits (163), Expect = 1e-12 Identities = 31/34 (91%), Positives = 31/34 (91%) Frame = +3 Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 356 EAQSKRGILTLKYPIEHGIVTNWDDMEKI TF Sbjct: 57 EAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90 Score = 45.6 bits (103), Expect = 3e-05 Identities = 21/27 (77%), Positives = 24/27 (88%) Frame = +3 Query: 429 NREKMTQIMFETFNTPAMYVAIQAVLS 509 N + M +IMFETFN+PAMYVAIQAVLS Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLS 104 >SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 411 Score = 96.7 bits (230), Expect = 1e-20 Identities = 45/102 (44%), Positives = 66/102 (64%), Gaps = 1/102 (0%) Frame = +3 Query: 207 SGRDGRYGTEGLLCRREAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 383 S + G + L+ EA R +L + YP+++GIV NWDDM+ +W +TF +++ + P Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103 Query: 384 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 509 VLLTE PLNP NREKM ++MFE + +Y+AIQAVL+ Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLT 145 Score = 44.8 bits (101), Expect = 4e-05 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%) Frame = +1 Query: 103 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGE 255 + +V DNG+G K G+AG + P +FPS+VGRP R + + KD VG+ Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGD 59 >SB_54| Best HMM Match : Actin (HMM E-Value=0) Length = 2486 Score = 86.6 bits (205), Expect = 1e-17 Identities = 38/58 (65%), Positives = 48/58 (82%) Frame = +3 Query: 336 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 509 K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++ Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMA 2186 Score = 59.7 bits (138), Expect = 1e-09 Identities = 23/34 (67%), Positives = 30/34 (88%) Frame = +1 Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 210 +V+DNGSG CKAG + D++PR VFP+IVGRPRH+ Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130 >SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) Length = 367 Score = 69.7 bits (163), Expect = 1e-12 Identities = 28/42 (66%), Positives = 37/42 (88%) Frame = +3 Query: 384 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 509 +HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLS Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLS 167 >SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) Length = 240 Score = 64.1 bits (149), Expect = 7e-11 Identities = 26/72 (36%), Positives = 46/72 (63%) Frame = +3 Query: 294 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 473 PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62 Query: 474 PAMYVAIQAVLS 509 PA ++ +VL+ Sbjct: 63 PAFFLCKNSVLT 74 >SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) Length = 1392 Score = 59.7 bits (138), Expect = 1e-09 Identities = 27/39 (69%), Positives = 29/39 (74%) Frame = +1 Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 210 E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392 >SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) Length = 921 Score = 51.2 bits (117), Expect = 5e-07 Identities = 21/49 (42%), Positives = 32/49 (65%) Frame = +1 Query: 79 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 225 FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741 >SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) Length = 372 Score = 46.4 bits (105), Expect = 1e-05 Identities = 22/49 (44%), Positives = 27/49 (55%) Frame = +3 Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 401 EA K T K+PI H IV +WD ME+ W + LR PE+H LL Sbjct: 289 EAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336 >SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 198 Score = 41.9 bits (94), Expect = 3e-04 Identities = 21/39 (53%), Positives = 27/39 (69%) Frame = -3 Query: 207 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 91 MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39 >SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) Length = 152 Score = 38.3 bits (85), Expect = 0.004 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +3 Query: 450 IMFETFNTPAMYVAIQAVLS 509 IMFE FN+PA+YVAIQAVLS Sbjct: 1 IMFEAFNSPAVYVAIQAVLS 20 >SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 220 Score = 33.9 bits (74), Expect = 0.082 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%) Frame = +3 Query: 210 GRDGRYGTEGLLCRREAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 380 GR G + GL + S I L+ P + +VT+++ E++ H F + P Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164 Query: 381 EEHPVLLTEAPLNPKANRE 437 HPV++TE NP R+ Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183 >SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 120 Score = 31.5 bits (68), Expect = 0.44 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -1 Query: 182 GNTARGASSPAKPALHIPEPLSTT 111 GNT R PAKPAL++P P S T Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103 >SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) Length = 170 Score = 31.5 bits (68), Expect = 0.44 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -1 Query: 182 GNTARGASSPAKPALHIPEPLSTT 111 GNT R PAKPAL++P P S T Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103 >SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) Length = 635 Score = 30.7 bits (66), Expect = 0.77 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%) Frame = +3 Query: 177 VPLDRGKAPPSGRDGRYGTEGLLCRREAQSKRGILTLKYPIEHGIVTNW--DDMEKIWHH 350 V L + +GR+ G+ +CR++A ++TL + I G+ + D EK+W+H Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRKKAP----LITLSHVIRMGLALSLVSDVKEKVWYH 496 Query: 351 TFYN 362 T N Sbjct: 497 TCPN 500 >SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 749 Score = 30.3 bits (65), Expect = 1.0 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -1 Query: 182 GNTARGASSPAKPALHIPEPLSTT 111 GNT R PAKP+L++P P S T Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563 >SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1259 Score = 30.3 bits (65), Expect = 1.0 Identities = 14/31 (45%), Positives = 16/31 (51%) Frame = +2 Query: 410 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 502 SP P+ R D+P V A HV HPSR Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295 >SB_29730| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 4275 Score = 29.9 bits (64), Expect = 1.3 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 1/85 (1%) Frame = +3 Query: 216 DGRYGTEGLLCRREAQSKRGILTLKYPIEHGIVTNWDDMEK-IWHHTFYNELRVAPEEHP 392 D R +L +REA + G +P H WD++ K ++ + E+ + P P Sbjct: 2939 DHRGAWNTMLLKREALQQTGQYLRLFPNLHNNEPYWDELAKEVYRYIGNKEVPLLPVHRP 2998 Query: 393 VLLTEAPLNPKANREKMTQIMFETF 467 V E+ K E+ +++ E F Sbjct: 2999 V-EDESASEKKEQDEQASRVKIEWF 3022 >SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) Length = 272 Score = 29.9 bits (64), Expect = 1.3 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = -3 Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130 V+LSH + H M D +HG RS SCET L T Sbjct: 224 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259 >SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) Length = 580 Score = 29.9 bits (64), Expect = 1.3 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +3 Query: 294 PIEHGIVTNWDDMEKIWHHTFYNE 365 P + G + NWD ++IW +TF E Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315 Score = 27.9 bits (59), Expect = 5.4 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +1 Query: 97 EVAALVVDNGSGMCKAGFAGDDAPRAV 177 ++A LV+D G+ K GFA + APR++ Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258 >SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 334 Score = 29.5 bits (63), Expect = 1.8 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = -2 Query: 316 VTIPCSMGYLRVRIPLLLCASLLHKSPSVP 227 V PC M LRVR+ C S+LH + P Sbjct: 60 VACPCCMSLLRVRVVCPCCMSVLHVRVACP 89 Score = 27.5 bits (58), Expect = 7.2 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = -2 Query: 334 SMSSQLVTIPCSMGYLRVRIPLLLCASLLHKSPSVP 227 S+ V PC M L VR+ C S+LH + P Sbjct: 2 SLLRDRVVCPCCMSVLCVRVACPCCVSVLHVRVACP 37 >SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 591 Score = 29.5 bits (63), Expect = 1.8 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = -3 Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130 V+LSH + H M D +HG RS SCET L T Sbjct: 419 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454 >SB_21074| Best HMM Match : NadA (HMM E-Value=2) Length = 358 Score = 29.5 bits (63), Expect = 1.8 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = -3 Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130 V+LSH + H M D +HG RS SCET L T Sbjct: 282 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317 >SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) Length = 339 Score = 29.5 bits (63), Expect = 1.8 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = -3 Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130 V+LSH + H M D +HG RS SCET L T Sbjct: 260 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295 >SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 181 Score = 29.5 bits (63), Expect = 1.8 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = -3 Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130 V+LSH + H M D +HG RS SCET L T Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137 >SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) Length = 402 Score = 29.5 bits (63), Expect = 1.8 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = -3 Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130 V+LSH + H M D +HG RS SCET L T Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137 >SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 458 Score = 29.5 bits (63), Expect = 1.8 Identities = 17/37 (45%), Positives = 20/37 (54%) Frame = -3 Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130 V+LSH + H M D +HG RS SCET L T Sbjct: 136 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171 >SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) Length = 186 Score = 29.1 bits (62), Expect = 2.3 Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 2/91 (2%) Frame = -2 Query: 388 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS--LLHKSPSVPYRPS 215 CS + + C + ++V CS + V + ++C+ + H+ PS Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147 Query: 214 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 122 R D FP + R HH+L + + R+H Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178 >SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) Length = 570 Score = 29.1 bits (62), Expect = 2.3 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = -3 Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130 ++LSH + H M D +HG RS SCET L T Sbjct: 184 IVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219 >SB_4468| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1513 Score = 28.7 bits (61), Expect = 3.1 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 3/37 (8%) Frame = -2 Query: 259 ASLLHKSPSVPYRPSRPD---GGAFPRSRGTRREEHH 158 ASL H++PS P P P G F + G +R +H Sbjct: 618 ASLSHETPSTPQTPRSPTSSMSGPFDNAFGRKRSPYH 654 >SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 130 Score = 28.3 bits (60), Expect = 4.1 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -1 Query: 182 GNTARGASSPAKPALHIPEPLSTT 111 GNT R AKPAL++P P S T Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63 >SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 635 Score = 28.3 bits (60), Expect = 4.1 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = -1 Query: 182 GNTARGASSPAKPALHIPEPLSTT 111 GNT R PAKP L IP P + T Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91 >SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 285 Score = 27.5 bits (58), Expect = 7.2 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = -1 Query: 197 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 87 L IE + A++P P + +P+ + +AAT +SH Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258 >SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 617 Score = 27.5 bits (58), Expect = 7.2 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = -2 Query: 253 LLHKSPSVPYRPS--RPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPT 107 LL +S P +P+ RP GGA P++ ++ + N+ T+ PT Sbjct: 92 LLDESTEAPPQPATIRPQGGALPQTPVKGKQNKRVSDNKEFTHAMQARRPT 142 >SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88) Length = 379 Score = 27.5 bits (58), Expect = 7.2 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Frame = -2 Query: 328 SSQLVTI--PCSMGYLRV-RIPLLLCASLLHKSPSVPYRP 218 S LV++ P S Y + RIP LC L PS PY+P Sbjct: 260 SPSLVSLQAPLSYSYKPLPRIPSSLCLLSLQAPPSYPYKP 299 >SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) Length = 419 Score = 27.1 bits (57), Expect = 9.5 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = -3 Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130 ++LSH + H L A +HG R +SCET L T Sbjct: 253 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288 >SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) Length = 766 Score = 27.1 bits (57), Expect = 9.5 Identities = 12/35 (34%), Positives = 22/35 (62%) Frame = +1 Query: 103 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 207 + +++D GS KAGFA ++A + + S++G H Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516 >SB_9298| Best HMM Match : rve (HMM E-Value=4.8e-35) Length = 1514 Score = 27.1 bits (57), Expect = 9.5 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -2 Query: 289 LRVRIPLLLCASLLHKSPSVPYRPSRPDGGAFPR 188 L+ R+ L LC +++ +S V Y GG F R Sbjct: 1128 LKTRLDLWLCGTIIQQSGPVSYVVKLSSGGVFRR 1161 >SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) Length = 330 Score = 27.1 bits (57), Expect = 9.5 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = -3 Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130 ++LSH + H L A +HG R +SCET L T Sbjct: 114 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149 >SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2396 Score = 27.1 bits (57), Expect = 9.5 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = -3 Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130 ++LSH + H L A +HG R +SCET L T Sbjct: 1652 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687 >SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 859 Score = 27.1 bits (57), Expect = 9.5 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = -3 Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130 ++LSH + H L A +HG R +SCET L T Sbjct: 680 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715 >SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) Length = 329 Score = 27.1 bits (57), Expect = 9.5 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = -3 Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130 ++LSH + H L A +HG R +SCET L T Sbjct: 235 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270 >SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) Length = 1492 Score = 27.1 bits (57), Expect = 9.5 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = -3 Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130 ++LSH + H L A +HG R +SCET L T Sbjct: 1090 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125 >SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) Length = 452 Score = 27.1 bits (57), Expect = 9.5 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = -3 Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130 ++LSH + H L A +HG R +SCET L T Sbjct: 33 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68 >SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) Length = 330 Score = 27.1 bits (57), Expect = 9.5 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = -3 Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130 ++LSH + H L A +HG R +SCET L T Sbjct: 114 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,793,645 Number of Sequences: 59808 Number of extensions: 425581 Number of successful extensions: 1350 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 1183 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1344 length of database: 16,821,457 effective HSP length: 77 effective length of database: 12,216,241 effective search space used: 1184975377 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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