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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0887
         (524 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)             184   4e-47
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)              184   4e-47
SB_56| Best HMM Match : Actin (HMM E-Value=0)                         184   4e-47
SB_56628| Best HMM Match : Actin (HMM E-Value=0)                      184   4e-47
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)              184   4e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)             118   4e-27
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)              97   1e-20
SB_54| Best HMM Match : Actin (HMM E-Value=0)                          87   1e-17
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)             70   1e-12
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)                  64   7e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)                  60   1e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)                 51   5e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)               46   1e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   3e-04
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)                     38   0.004
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.082
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.44 
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)                    31   0.44 
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)                  31   0.77 
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.0  
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.0  
SB_29730| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.3  
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)                      30   1.3  
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)                  30   1.3  
SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.8  
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.8  
SB_21074| Best HMM Match : NadA (HMM E-Value=2)                        29   1.8  
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)                    29   1.8  
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.8  
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)                       29   1.8  
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   1.8  
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)                 29   2.3  
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)                    29   2.3  
SB_4468| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.1  
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.1  
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.1  
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.2  
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.2  
SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88)               27   7.2  
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)                    27   9.5  
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)                  27   9.5  
SB_9298| Best HMM Match : rve (HMM E-Value=4.8e-35)                    27   9.5  
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)              27   9.5  
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   9.5  
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.5  
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)                   27   9.5  
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)                 27   9.5  
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)                 27   9.5  
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)              27   9.5  

>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 376

 Score =  184 bits (448), Expect = 4e-47
 Identities = 84/85 (98%), Positives = 85/85 (100%)
 Frame = +3

Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
           EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58  EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117

Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
           EKMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 118 EKMTQIMFETFNSPAMYVAIQAVLS 142



 Score =  119 bits (287), Expect = 1e-27
 Identities = 54/62 (87%), Positives = 59/62 (95%)
 Frame = +1

Query: 85  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264
           M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+  +
Sbjct: 1   MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 265 AK 270
           +K
Sbjct: 61  SK 62


>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 375

 Score =  184 bits (448), Expect = 4e-47
 Identities = 84/85 (98%), Positives = 85/85 (100%)
 Frame = +3

Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
           EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 57  EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 116

Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
           EKMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 117 EKMTQIMFETFNSPAMYVAIQAVLS 141



 Score =  116 bits (280), Expect = 9e-27
 Identities = 52/60 (86%), Positives = 58/60 (96%)
 Frame = +1

Query: 91  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
           +++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+  ++K
Sbjct: 2   EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61


>SB_56| Best HMM Match : Actin (HMM E-Value=0)
          Length = 375

 Score =  184 bits (448), Expect = 4e-47
 Identities = 84/85 (98%), Positives = 85/85 (100%)
 Frame = +3

Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
           EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 57  EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 116

Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
           EKMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 117 EKMTQIMFETFNSPAMYVAIQAVLS 141



 Score =  118 bits (283), Expect = 4e-27
 Identities = 53/60 (88%), Positives = 58/60 (96%)
 Frame = +1

Query: 91  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
           ++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+  ++K
Sbjct: 2   EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61


>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
          Length = 376

 Score =  184 bits (448), Expect = 4e-47
 Identities = 84/85 (98%), Positives = 85/85 (100%)
 Frame = +3

Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
           EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58  EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117

Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
           EKMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 118 EKMTQIMFETFNSPAMYVAIQAVLS 142



 Score =  124 bits (298), Expect = 6e-29
 Identities = 55/62 (88%), Positives = 60/62 (96%)
 Frame = +1

Query: 85  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264
           MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+  +
Sbjct: 1   MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 265 AK 270
           +K
Sbjct: 61  SK 62


>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 349

 Score =  184 bits (448), Expect = 4e-47
 Identities = 84/85 (98%), Positives = 85/85 (100%)
 Frame = +3

Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
           EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58  EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117

Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
           EKMTQIMFETFN+PAMYVAIQAVLS
Sbjct: 118 EKMTQIMFETFNSPAMYVAIQAVLS 142



 Score =  119 bits (287), Expect = 1e-27
 Identities = 52/62 (83%), Positives = 59/62 (95%)
 Frame = +1

Query: 85  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264
           M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+  +
Sbjct: 1   MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 265 AK 270
           +K
Sbjct: 61  SK 62


>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 338

 Score =  118 bits (283), Expect = 4e-27
 Identities = 52/60 (86%), Positives = 58/60 (96%)
 Frame = +1

Query: 91  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
           D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+  ++K
Sbjct: 2   DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61



 Score = 69.7 bits (163), Expect = 1e-12
 Identities = 31/34 (91%), Positives = 31/34 (91%)
 Frame = +3

Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 356
           EAQSKRGILTLKYPIEHGIVTNWDDMEKI   TF
Sbjct: 57  EAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90



 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = +3

Query: 429 NREKMTQIMFETFNTPAMYVAIQAVLS 509
           N + M +IMFETFN+PAMYVAIQAVLS
Sbjct: 78  NWDDMEKIMFETFNSPAMYVAIQAVLS 104


>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 411

 Score = 96.7 bits (230), Expect = 1e-20
 Identities = 45/102 (44%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
 Frame = +3

Query: 207 SGRDGRYGTEGLLCRREAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 383
           S + G    + L+   EA   R +L + YP+++GIV NWDDM+ +W +TF  +++ + P 
Sbjct: 44  SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103

Query: 384 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 509
              VLLTE PLNP  NREKM ++MFE +    +Y+AIQAVL+
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLT 145



 Score = 44.8 bits (101), Expect = 4e-05
 Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
 Frame = +1

Query: 103 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGE 255
           + +V DNG+G  K G+AG + P  +FPS+VGRP  R    +  +  KD  VG+
Sbjct: 7   SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGD 59


>SB_54| Best HMM Match : Actin (HMM E-Value=0)
          Length = 2486

 Score = 86.6 bits (205), Expect = 1e-17
 Identities = 38/58 (65%), Positives = 48/58 (82%)
 Frame = +3

Query: 336  KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 509
            K+W H F ++LRV  E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMA 2186



 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 23/34 (67%), Positives = 30/34 (88%)
 Frame = +1

Query: 109  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 210
            +V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130


>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
          Length = 367

 Score = 69.7 bits (163), Expect = 1e-12
 Identities = 28/42 (66%), Positives = 37/42 (88%)
 Frame = +3

Query: 384 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 509
           +HPVLLTEAPLNP+ NREK  ++ FETFN PA+++++QAVLS
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLS 167


>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
          Length = 240

 Score = 64.1 bits (149), Expect = 7e-11
 Identities = 26/72 (36%), Positives = 46/72 (63%)
 Frame = +3

Query: 294 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 473
           PI+ G++ +WD  EKI  + +   ++     HP+L++EA  N +  REK+T++MFE +N 
Sbjct: 3   PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62

Query: 474 PAMYVAIQAVLS 509
           PA ++   +VL+
Sbjct: 63  PAFFLCKNSVLT 74


>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
          Length = 1392

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 27/39 (69%), Positives = 29/39 (74%)
 Frame = +1

Query: 94   EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 210
            E    LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392


>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
          Length = 921

 Score = 51.2 bits (117), Expect = 5e-07
 Identities = 21/49 (42%), Positives = 32/49 (65%)
 Frame = +1

Query: 79  FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 225
           FK+      A+V+DNG G+ K GFAGD  PR + P++VG P+   +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741


>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
          Length = 372

 Score = 46.4 bits (105), Expect = 1e-05
 Identities = 22/49 (44%), Positives = 27/49 (55%)
 Frame = +3

Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 401
           EA  K    T K+PI H IV +WD ME+ W    +  LR  PE+H  LL
Sbjct: 289 EAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336


>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 198

 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 21/39 (53%), Positives = 27/39 (69%)
 Frame = -3

Query: 207 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 91
           MA  + D GE+G+ SI+S ETGLAHTGAI+  Q  +  V
Sbjct: 1   MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39


>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
          Length = 152

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +3

Query: 450 IMFETFNTPAMYVAIQAVLS 509
           IMFE FN+PA+YVAIQAVLS
Sbjct: 1   IMFEAFNSPAVYVAIQAVLS 20


>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 220

 Score = 33.9 bits (74), Expect = 0.082
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
 Frame = +3

Query: 210 GRDGRYGTEGLLCRREAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 380
           GR G   + GL    +  S   I   L+ P +  +VT+++  E++  H F +     P  
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164

Query: 381 EEHPVLLTEAPLNPKANRE 437
             HPV++TE   NP   R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183


>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 120

 Score = 31.5 bits (68), Expect = 0.44
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1

Query: 182 GNTARGASSPAKPALHIPEPLSTT 111
           GNT R    PAKPAL++P P S T
Sbjct: 80  GNTNRRTRIPAKPALNLPSPPSKT 103


>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
          Length = 170

 Score = 31.5 bits (68), Expect = 0.44
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -1

Query: 182 GNTARGASSPAKPALHIPEPLSTT 111
           GNT R    PAKPAL++P P S T
Sbjct: 80  GNTNRRTRIPAKPALNLPSPPSKT 103


>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
          Length = 635

 Score = 30.7 bits (66), Expect = 0.77
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +3

Query: 177 VPLDRGKAPPSGRDGRYGTEGLLCRREAQSKRGILTLKYPIEHGIVTNW--DDMEKIWHH 350
           V L +     +GR+   G+   +CR++A     ++TL + I  G+  +   D  EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRKKAP----LITLSHVIRMGLALSLVSDVKEKVWYH 496

Query: 351 TFYN 362
           T  N
Sbjct: 497 TCPN 500


>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 749

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -1

Query: 182 GNTARGASSPAKPALHIPEPLSTT 111
           GNT R    PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563


>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1259

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 410 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 502
           SP P+   R D+P  V     A HV  HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295


>SB_29730| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4275

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
 Frame = +3

Query: 216  DGRYGTEGLLCRREAQSKRGILTLKYPIEHGIVTNWDDMEK-IWHHTFYNELRVAPEEHP 392
            D R     +L +REA  + G     +P  H     WD++ K ++ +    E+ + P   P
Sbjct: 2939 DHRGAWNTMLLKREALQQTGQYLRLFPNLHNNEPYWDELAKEVYRYIGNKEVPLLPVHRP 2998

Query: 393  VLLTEAPLNPKANREKMTQIMFETF 467
            V   E+    K   E+ +++  E F
Sbjct: 2999 V-EDESASEKKEQDEQASRVKIEWF 3022


>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
          Length = 272

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -3

Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
           V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 224 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259


>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
          Length = 580

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 294 PIEHGIVTNWDDMEKIWHHTFYNE 365
           P + G + NWD  ++IW +TF  E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315



 Score = 27.9 bits (59), Expect = 5.4
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 97  EVAALVVDNGSGMCKAGFAGDDAPRAV 177
           ++A LV+D G+   K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258


>SB_56842| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 334

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 316 VTIPCSMGYLRVRIPLLLCASLLHKSPSVP 227
           V  PC M  LRVR+    C S+LH   + P
Sbjct: 60  VACPCCMSLLRVRVVCPCCMSVLHVRVACP 89



 Score = 27.5 bits (58), Expect = 7.2
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -2

Query: 334 SMSSQLVTIPCSMGYLRVRIPLLLCASLLHKSPSVP 227
           S+    V  PC M  L VR+    C S+LH   + P
Sbjct: 2   SLLRDRVVCPCCMSVLCVRVACPCCVSVLHVRVACP 37


>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 591

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -3

Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
           V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 419 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454


>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
          Length = 358

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -3

Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
           V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 282 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317


>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
          Length = 339

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -3

Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
           V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 260 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295


>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 181

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -3

Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
           V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137


>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 402

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -3

Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
           V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137


>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 458

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -3

Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
           V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 136 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171


>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
          Length = 186

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
 Frame = -2

Query: 388 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS--LLHKSPSVPYRPS 215
           CS       +  + C    +  ++V   CS   + V +  ++C+   + H+       PS
Sbjct: 88  CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147

Query: 214 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 122
           R D   FP +   R   HH+L +   + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178


>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
          Length = 570

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -3

Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
           ++LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 184 IVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219


>SB_4468| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1513

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
 Frame = -2

Query: 259 ASLLHKSPSVPYRPSRPD---GGAFPRSRGTRREEHH 158
           ASL H++PS P  P  P     G F  + G +R  +H
Sbjct: 618 ASLSHETPSTPQTPRSPTSSMSGPFDNAFGRKRSPYH 654


>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 130

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -1

Query: 182 GNTARGASSPAKPALHIPEPLSTT 111
           GNT R     AKPAL++P P S T
Sbjct: 40  GNTNRRTRIQAKPALNLPSPPSKT 63


>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 635

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -1

Query: 182 GNTARGASSPAKPALHIPEPLSTT 111
           GNT R    PAKP L IP P + T
Sbjct: 68  GNTNRRTRIPAKPTLTIPSPPTKT 91


>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 285

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -1

Query: 197 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 87
           L  IE +    A++P  P + +P+ +   +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258


>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 617

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = -2

Query: 253 LLHKSPSVPYRPS--RPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPT 107
           LL +S   P +P+  RP GGA P++    ++   +  N+  T+      PT
Sbjct: 92  LLDESTEAPPQPATIRPQGGALPQTPVKGKQNKRVSDNKEFTHAMQARRPT 142


>SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
          Length = 379

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = -2

Query: 328 SSQLVTI--PCSMGYLRV-RIPLLLCASLLHKSPSVPYRP 218
           S  LV++  P S  Y  + RIP  LC   L   PS PY+P
Sbjct: 260 SPSLVSLQAPLSYSYKPLPRIPSSLCLLSLQAPPSYPYKP 299


>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
          Length = 419

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -3

Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
           ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 253 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288


>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
          Length = 766

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +1

Query: 103 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 207
           + +++D GS   KAGFA ++A +  + S++G   H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516


>SB_9298| Best HMM Match : rve (HMM E-Value=4.8e-35)
          Length = 1514

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -2

Query: 289  LRVRIPLLLCASLLHKSPSVPYRPSRPDGGAFPR 188
            L+ R+ L LC +++ +S  V Y      GG F R
Sbjct: 1128 LKTRLDLWLCGTIIQQSGPVSYVVKLSSGGVFRR 1161


>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
          Length = 330

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -3

Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
           ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 114 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149


>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2396

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -3

Query: 240  VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
            ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 1652 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687


>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 859

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -3

Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
           ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 680 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715


>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
          Length = 329

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -3

Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
           ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 235 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270


>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
          Length = 1492

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -3

Query: 240  VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
            ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 1090 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125


>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
          Length = 452

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -3

Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
           ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 33  IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68


>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
          Length = 330

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -3

Query: 240 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 130
           ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 114 IVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,793,645
Number of Sequences: 59808
Number of extensions: 425581
Number of successful extensions: 1350
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1344
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1184975377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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