Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0887
(524 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 186 1e-47
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 186 1e-47
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 186 1e-47
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 186 1e-47
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 186 1e-47
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 186 1e-47
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 186 1e-47
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 186 1e-47
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 186 1e-47
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 186 1e-47
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 182 2e-46
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 125 2e-29
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 125 2e-29
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 124 4e-29
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 124 5e-29
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 124 5e-29
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 101 3e-22
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 99 1e-21
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 77 1e-14
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 37 0.008
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 37 0.008
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 32 0.22
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z49909-12|CAA90114.2| 121|Caenorhabditis elegans Hypothetical p... 28 3.6
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 3.6
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 3.6
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 3.6
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 3.6
AF040653-12|AAB95023.2| 257|Caenorhabditis elegans Hypothetical... 28 4.7
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 4.7
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 8.2
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 8.2
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 186 bits (452), Expect = 1e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFNTPAMYVAIQAVLS
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLS 142
Score = 125 bits (301), Expect = 2e-29
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 AK 270
+K
Sbjct: 61 SK 62
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 186 bits (452), Expect = 1e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFNTPAMYVAIQAVLS
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLS 142
Score = 124 bits (298), Expect = 5e-29
Identities = 55/62 (88%), Positives = 60/62 (96%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 AK 270
+K
Sbjct: 61 SK 62
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 186 bits (452), Expect = 1e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFNTPAMYVAIQAVLS
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLS 142
Score = 125 bits (301), Expect = 2e-29
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 AK 270
+K
Sbjct: 61 SK 62
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 186 bits (452), Expect = 1e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFNTPAMYVAIQAVLS
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLS 142
Score = 125 bits (301), Expect = 2e-29
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 AK 270
+K
Sbjct: 61 SK 62
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 186 bits (452), Expect = 1e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFNTPAMYVAIQAVLS
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLS 142
Score = 125 bits (301), Expect = 2e-29
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 AK 270
+K
Sbjct: 61 SK 62
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 186 bits (452), Expect = 1e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFNTPAMYVAIQAVLS
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLS 142
Score = 122 bits (294), Expect = 2e-28
Identities = 53/62 (85%), Positives = 60/62 (96%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ +
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 AK 270
+K
Sbjct: 61 SK 62
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 186 bits (452), Expect = 1e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFNTPAMYVAIQAVLS
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLS 142
Score = 125 bits (301), Expect = 2e-29
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 AK 270
+K
Sbjct: 61 SK 62
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 186 bits (452), Expect = 1e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 14 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 73
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFNTPAMYVAIQAVLS
Sbjct: 74 EKMTQIMFETFNTPAMYVAIQAVLS 98
Score = 32.3 bits (70), Expect = 0.22
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 217 MVGMGQKDSYVGERHRAK 270
MVGMGQKDSYVG+ ++K
Sbjct: 1 MVGMGQKDSYVGDEAQSK 18
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 186 bits (452), Expect = 1e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 44 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 103
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFNTPAMYVAIQAVLS
Sbjct: 104 EKMTQIMFETFNTPAMYVAIQAVLS 128
Score = 86.6 bits (205), Expect = 1e-17
Identities = 38/44 (86%), Positives = 42/44 (95%)
Frame = +1
Query: 139 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ ++K
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 48
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 186 bits (452), Expect = 1e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFNTPAMYVAIQAVLS
Sbjct: 118 EKMTQIMFETFNTPAMYVAIQAVLS 142
Score = 125 bits (301), Expect = 2e-29
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 AK 270
+K
Sbjct: 61 SK 62
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 182 bits (442), Expect = 2e-46
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 434
EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NR
Sbjct: 57 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNR 116
Query: 435 EKMTQIMFETFNTPAMYVAIQAVLS 509
EKMTQIMFETFNTPAMYV IQAVLS
Sbjct: 117 EKMTQIMFETFNTPAMYVNIQAVLS 141
Score = 118 bits (285), Expect = 2e-27
Identities = 53/60 (88%), Positives = 58/60 (96%)
Frame = +1
Query: 91 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHRAK 270
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ ++K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 125 bits (301), Expect = 2e-29
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 AK 270
+K
Sbjct: 61 SK 62
Score = 66.1 bits (154), Expect = 1e-11
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKI 341
EAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 125 bits (301), Expect = 2e-29
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ +
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 AK 270
+K
Sbjct: 61 SK 62
Score = 66.1 bits (154), Expect = 1e-11
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKI 341
EAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 124 bits (299), Expect = 4e-29
Identities = 52/86 (60%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKAN 431
+A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP N
Sbjct: 60 KAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKN 119
Query: 432 REKMTQIMFETFNTPAMYVAIQAVLS 509
RE+ +I FETFN PA+Y+ +QAVLS
Sbjct: 120 RERSAEIFFETFNVPALYIQMQAVLS 145
Score = 55.2 bits (127), Expect = 3e-08
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGER 258
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPK 60
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 124 bits (298), Expect = 5e-29
Identities = 55/62 (88%), Positives = 60/62 (96%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 AK 270
+K
Sbjct: 61 SK 62
Score = 66.1 bits (154), Expect = 1e-11
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDMEKI 341
EAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 124 bits (298), Expect = 5e-29
Identities = 55/62 (88%), Positives = 60/62 (96%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGERHR 264
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG+ +
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 265 AK 270
+K
Sbjct: 61 SK 62
Score = 60.5 bits (140), Expect = 7e-10
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 255 EAQSKRGILTLKYPIEHGIVTNWDDM 332
EAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 58 EAQSKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 101 bits (242), Expect = 3e-22
Identities = 48/100 (48%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
Frame = +3
Query: 213 RDGRYGTEGLLCRREAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 389
R G + L+ E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 390 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 509
+LLTE PLNP +NREKM Q+MFE + ++YVA+QAVL+
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLT 145
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Frame = +1
Query: 109 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGE 255
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VGE
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGE 59
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 99 bits (238), Expect = 1e-21
Identities = 43/78 (55%), Positives = 54/78 (69%)
Frame = +3
Query: 282 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 461
T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 462 TFNTPAMYVAIQAVLSCT 515
+FN P +Y+A+QAVL+ T
Sbjct: 140 SFNVPGLYIAVQAVLALT 157
Score = 36.7 bits (81), Expect = 0.010
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 85 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 192
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 76.6 bits (180), Expect = 1e-14
Identities = 33/72 (45%), Positives = 48/72 (66%)
Frame = +3
Query: 297 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 476
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 477 AMYVAIQAVLSC 512
A Y++ VLSC
Sbjct: 154 AYYLSKNVVLSC 165
Score = 33.5 bits (73), Expect = 0.095
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 94 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 192
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.008
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 294 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 467
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.008
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 294 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 467
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 32.3 bits (70), Expect = 0.22
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +3
Query: 189 RGKAPPSGRDGRYGTEGLLCRREAQSKRG 275
RGKA +GRDGR G EG R Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = -2
Query: 346 CQIFSMSSQLVTIPC-SMGYLRVRIP---LLLCASLLHKSPSVPYRPSRPDG 203
CQ+FS QLVT+ SMG +++++ L L AS P++ P DG
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPEIDG 302
>Z49909-12|CAA90114.2| 121|Caenorhabditis elegans Hypothetical
protein C14A4.10 protein.
Length = 121
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 425 GQQREDDPDHVRNIQHARHVRRHPSRALLYASG 523
G EDD + V N + +HV R R+++Y G
Sbjct: 9 GSDAEDDKEKVVNPEDKKHVLRRDLRSMVYGFG 41
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.3 bits (60), Expect = 3.6
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 368 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 493
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 164 ASSPAKPALHIPEPLSTTNAATSS 93
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 3.6
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 368 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 493
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 164 ASSPAKPALHIPEPLSTTNAATSS 93
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.3 bits (60), Expect = 3.6
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 368 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 493
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 164 ASSPAKPALHIPEPLSTTNAATSS 93
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 3.6
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 368 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 493
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 164 ASSPAKPALHIPEPLSTTNAATSS 93
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF040653-12|AAB95023.2| 257|Caenorhabditis elegans Hypothetical
protein K05F6.10 protein.
Length = 257
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +3
Query: 198 APPSGRDGRYGTEGLL-CRREAQSKRGILTLK--YPIEHGIVTNWDDMEKIWHH 350
+PP+ +G EG RR+ + GI + P+ HG + +E++W H
Sbjct: 77 SPPTTAKANFGREGTRQVRRQDDTTPGITKSEPISPLGHGSIMQARRLEEVWKH 130
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 139 KAGFAGDDAPRAVFPSIVGRPRHQG 213
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 8.2
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 291 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 392
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 8.2
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 291 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 392
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,668,921
Number of Sequences: 27780
Number of extensions: 292207
Number of successful extensions: 1144
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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