Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0886
         (608 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   3.5  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   6.1  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   6.1  

>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 73  RHANRRPSTLSTPSYGATEAAAAS 2
           R    RP  ++TP +G   A++A+
Sbjct: 41  RRRAARPGVVTTPRWGCARASSAT 64


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 535 SNTDSSPYFSKKVKIRELLKVVIILKHEFHC 443
           S T SS  F  K K+R L   +II+   F C
Sbjct: 257 SVTRSSLAFLGKAKVRTLKMTIIIVLVFFVC 287


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 535 SNTDSSPYFSKKVKIRELLKVVIILKHEFHC 443
           S T SS  F  K K+R L   +II+   F C
Sbjct: 257 SVTRSSLAFLGKAKVRTLKMTIIIVLVFFVC 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,622
Number of Sequences: 336
Number of extensions: 2588
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)