Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0885
         (445 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Y9K6 Cluster: Putative uncharacterized protein; n=3; ...    36   0.30 
UniRef50_Q6ZVA9 Cluster: CDNA FLJ42813 fis, clone BRCAN2012355; ...    36   0.30 
UniRef50_Q6CB32 Cluster: Similarity; n=2; root|Rep: Similarity -...    36   0.52 
UniRef50_UPI00015A6A91 Cluster: UPI00015A6A91 related cluster; n...    34   1.6  
UniRef50_Q5CV17 Cluster: Putative uncharacterized protein; n=1; ...    33   2.1  
UniRef50_P13568 Cluster: Multidrug resistance protein; n=37; Pla...    32   4.8  
UniRef50_A7T4D6 Cluster: Predicted protein; n=1; Nematostella ve...    32   6.4  
UniRef50_Q34937 Cluster: MURF2 protein; n=9; Trypanosomatidae|Re...    31   8.5  

>UniRef50_Q4Y9K6 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 61

 Score = 36.3 bits (80), Expect = 0.30
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = -2

Query: 327 YLVHIR*IQCIVIFFNFIYILKFIFAFNI 241
           Y ++I+   CIV FFN IYI+  +F FNI
Sbjct: 22  YCIYIKNKNCIVTFFNCIYIILILFLFNI 50


>UniRef50_Q6ZVA9 Cluster: CDNA FLJ42813 fis, clone BRCAN2012355;
           n=1; Homo sapiens|Rep: CDNA FLJ42813 fis, clone
           BRCAN2012355 - Homo sapiens (Human)
          Length = 180

 Score = 36.3 bits (80), Expect = 0.30
 Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
 Frame = -1

Query: 367 HSLQHLRYYVYSILFSTYSVNSMYSNIL*FYIYT*IHFCI*HMNYSSNIHLKNSSCVE*I 188
           H   H+   +Y+  +    ++      +  YIYT IH C+ H+N   +I++   +C++ I
Sbjct: 72  HICVHIYLCMYTHTYMCAHIHMCVYTYIYVYIYTHIHICV-HINMYVSIYVYIYTCIQ-I 129

Query: 187 ILWPFNCFL-TFSH*CGWVYFKLIIHISFL 101
            ++ +  ++ T+++ C   Y  + IH S +
Sbjct: 130 YIYMYTLYVCTYTYMC--TYIHICIHTSII 157


>UniRef50_Q6CB32 Cluster: Similarity; n=2; root|Rep: Similarity -
           Yarrowia lipolytica (Candida lipolytica)
          Length = 281

 Score = 35.5 bits (78), Expect = 0.52
 Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
 Frame = -2

Query: 345 IMYIVFYLVHIR*IQCIVIFFNFIYILKFIFAFNI*TILQTFI*RIVHVLSKLY-YGHLI 169
           I+Y ++++           FF +I+I  FIF F I   +  FI   + +   ++ +  + 
Sbjct: 20  ILYFIYFIFSFSYFFFFFFFFFYIFIFIFIFIF-IFIFIFIFIFIFIFIFIFIFIFIFIF 78

Query: 168 VF*HFLISAVGYILNS*FIFHFCQIMSYPIIFVFVISSYYI 46
           +F    I  + YIL   FIF+    + Y + F+F I  Y+I
Sbjct: 79  IFIFIFIFYIFYILY--FIFYILYFIFYILYFIFYI-LYFI 116


>UniRef50_UPI00015A6A91 Cluster: UPI00015A6A91 related cluster; n=1;
           Danio rerio|Rep: UPI00015A6A91 UniRef100 entry - Danio
           rerio
          Length = 384

 Score = 33.9 bits (74), Expect = 1.6
 Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
 Frame = -2

Query: 369 NIHCNT*DIMYIVFYLVHIR*IQCIVIFFNFIYILKFIFAFNI*TILQTFI*RIVHVL-- 196
           N  CN   + Y  FY + I    CI + + F Y+  F     I  ++ TFI  + H++  
Sbjct: 268 NFICNC--LHYASFYSLFI----CICLLYAFFYLHLFTLHIIIFALIYTFI-YMTHLIFI 320

Query: 195 ---SKLYYGHLIVF*HFLISAVGYILNS*FIFHFCQIMSYPIIFVFVISSYYICTYCIND 25
                L+Y HL     FL + + Y+ +  FI   C +  +  +++  +   +IC + I  
Sbjct: 321 CLHCALFYLHLFTLCIFLFAFI-YMTHLIFICLHCALFLFAFVYIMHL---FICMHSIQQ 376

Query: 24  I 22
           +
Sbjct: 377 L 377


>UniRef50_Q5CV17 Cluster: Putative uncharacterized protein; n=1;
           Cryptosporidium parvum Iowa II|Rep: Putative
           uncharacterized protein - Cryptosporidium parvum Iowa II
          Length = 242

 Score = 33.5 bits (73), Expect = 2.1
 Identities = 25/85 (29%), Positives = 43/85 (50%)
 Frame = -2

Query: 345 IMYIVFYLVHIR*IQCIVIFFNFIYILKFIFAFNI*TILQTFI*RIVHVLSKLYYGHLIV 166
           +++I+  L     I C++ F  F++ L+F+F   I  +   F   I+H+L  L+   L+ 
Sbjct: 105 VLFILCLLFIFLFILCLLFFIRFLFFLRFLFVLFI--LCHLF---ILHLLFVLFIICLLF 159

Query: 165 F*HFLISAVGYILNS*FIFHFCQIM 91
           F  FL   V +IL   FI H   ++
Sbjct: 160 FIRFLF--VLFILCHLFILHLLFVL 182


>UniRef50_P13568 Cluster: Multidrug resistance protein; n=37;
            Plasmodium|Rep: Multidrug resistance protein - Plasmodium
            falciparum (isolate FC27 / Papua New Guinea)
          Length = 1419

 Score = 32.3 bits (70), Expect = 4.8
 Identities = 15/59 (25%), Positives = 34/59 (57%)
 Frame = -2

Query: 234  ILQTFI*RIVHVLSKLYYGHLIVF*HFLISAVGYILNS*FIFHFCQIMSYPIIFVFVIS 58
            +L   I R VH+L      ++++F HF++    ++++    F+FC I++  + F++ I+
Sbjct: 888  VLSAHINRDVHLLKTGLVNNIVIFSHFIML---FLVSMVMSFYFCPIVAAVLTFIYFIN 943


>UniRef50_A7T4D6 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 176

 Score = 31.9 bits (69), Expect = 6.4
 Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
 Frame = -2

Query: 345 IMYIVFYLVHIR*IQCIVIFFNFIYILKFIF-AFNI*T--ILQTFI*RIVHVLSKLYYGH 175
           I+YIV+YL  I+ I C    ++F+Y L  IF   ++ T  I+Q+ I  IV+  S +Y   
Sbjct: 50  ILYIVYYLSSIQGILCNYTKYSFVYCLLCIFYPRHLVTDVIIQSIILYIVYYYSFVYCLL 109

Query: 174 LIVF*HFLISAV 139
            I +   L++ V
Sbjct: 110 CIFYPRHLVTDV 121


>UniRef50_Q34937 Cluster: MURF2 protein; n=9; Trypanosomatidae|Rep:
           MURF2 protein - Leishmania tarentolae (Sauroleishmania
           tarentolae)
          Length = 355

 Score = 31.5 bits (68), Expect = 8.5
 Identities = 19/76 (25%), Positives = 36/76 (47%)
 Frame = -2

Query: 291 IFFNFIYILKFIFAFNI*TILQTFI*RIVHVLSKLYYGHLIVF*HFLISAVGYILNS*FI 112
           IFF+F+++L FI  F +              LS LY G+ I + + L + + Y       
Sbjct: 65  IFFSFVFVLLFIVFFGL------------FSLSFLYTGYFIYYIYILYNFICYFFCFSIA 112

Query: 111 FHFCQIMSYPIIFVFV 64
            ++ +  +Y + F+F+
Sbjct: 113 LYYIEFFTYLLCFIFI 128


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 359,083,144
Number of Sequences: 1657284
Number of extensions: 6390020
Number of successful extensions: 14179
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14122
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)