Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0885
         (445 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens ...    36   0.048
AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    29   7.2  
AL162254-5|CAI16291.1|  324|Homo sapiens olfactory receptor, fam...    29   9.6  
AB065492-1|BAC05744.1|  324|Homo sapiens seven transmembrane hel...    29   9.6  

>AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42813 fis, clone BRCAN2012355. ).
          Length = 180

 Score = 36.3 bits (80), Expect = 0.048
 Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
 Frame = -1

Query: 367 HSLQHLRYYVYSILFSTYSVNSMYSNIL*FYIYT*IHFCI*HMNYSSNIHLKNSSCVE*I 188
           H   H+   +Y+  +    ++      +  YIYT IH C+ H+N   +I++   +C++ I
Sbjct: 72  HICVHIYLCMYTHTYMCAHIHMCVYTYIYVYIYTHIHICV-HINMYVSIYVYIYTCIQ-I 129

Query: 187 ILWPFNCFL-TFSH*CGWVYFKLIIHISFL 101
            ++ +  ++ T+++ C   Y  + IH S +
Sbjct: 130 YIYMYTLYVCTYTYMC--TYIHICIHTSII 157


>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
 Frame = -2

Query: 294 VIFFNFIYILKFIFAFNI*TILQTFI*RIVHVLSKLY-YGHLIVF*HFLISAVGYILNS* 118
           V  + F+YI  FI+ F I   +  ++   +++   ++ Y +L +F +  I    Y+    
Sbjct: 7   VYIYMFMYIFIFIYIF-IYIYIYVYVYIYLYIYFYIFTYIYLYIFIYIYICLYIYLYIYL 65

Query: 117 FIFHFCQIMSYPIIFVFVISSYYICTY 37
           +IF +  I  +  I++ +     IC Y
Sbjct: 66  YIFTYIYIYLHIFIYLHIFIYICICLY 92


>AL162254-5|CAI16291.1|  324|Homo sapiens olfactory receptor, family
           1, subfamily L, memberr RAS oncogene family) protein.
          Length = 324

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 16/64 (25%), Positives = 34/64 (53%)
 Frame = -1

Query: 262 IHFCI*HMNYSSNIHLKNSSCVE*IILWPFNCFLTFSH*CGWVYFKLIIHISFLSNNVIS 83
           I+ C+   N    + + N  C   ++ +P    +TFS+    ++  L+  ++F ++NVI 
Sbjct: 120 INRCVAICNPFHYVTVMNRRCCVLLLAFP----ITFSYFHSLLHVLLVNRLTFCTSNVIH 175

Query: 82  NYFC 71
           ++FC
Sbjct: 176 HFFC 179


>AB065492-1|BAC05744.1|  324|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 324

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 16/64 (25%), Positives = 34/64 (53%)
 Frame = -1

Query: 262 IHFCI*HMNYSSNIHLKNSSCVE*IILWPFNCFLTFSH*CGWVYFKLIIHISFLSNNVIS 83
           I+ C+   N    + + N  C   ++ +P    +TFS+    ++  L+  ++F ++NVI 
Sbjct: 120 INRCVAICNPFHYVTVMNRRCCVLLLAFP----ITFSYFHSLLHVLLVNRLTFCTSNVIH 175

Query: 82  NYFC 71
           ++FC
Sbjct: 176 HFFC 179


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,269,283
Number of Sequences: 237096
Number of extensions: 924266
Number of successful extensions: 1588
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1587
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)