BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0885 (445 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AK124803-1|BAC85953.1| 180|Homo sapiens protein ( Homo sapiens ... 36 0.048 AK127397-1|BAC86958.1| 130|Homo sapiens protein ( Homo sapiens ... 29 7.2 AL162254-5|CAI16291.1| 324|Homo sapiens olfactory receptor, fam... 29 9.6 AB065492-1|BAC05744.1| 324|Homo sapiens seven transmembrane hel... 29 9.6 >AK124803-1|BAC85953.1| 180|Homo sapiens protein ( Homo sapiens cDNA FLJ42813 fis, clone BRCAN2012355. ). Length = 180 Score = 36.3 bits (80), Expect = 0.048 Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 1/90 (1%) Frame = -1 Query: 367 HSLQHLRYYVYSILFSTYSVNSMYSNIL*FYIYT*IHFCI*HMNYSSNIHLKNSSCVE*I 188 H H+ +Y+ + ++ + YIYT IH C+ H+N +I++ +C++ I Sbjct: 72 HICVHIYLCMYTHTYMCAHIHMCVYTYIYVYIYTHIHICV-HINMYVSIYVYIYTCIQ-I 129 Query: 187 ILWPFNCFL-TFSH*CGWVYFKLIIHISFL 101 ++ + ++ T+++ C Y + IH S + Sbjct: 130 YIYMYTLYVCTYTYMC--TYIHICIHTSII 157 >AK127397-1|BAC86958.1| 130|Homo sapiens protein ( Homo sapiens cDNA FLJ45488 fis, clone BRTHA2003759. ). Length = 130 Score = 29.1 bits (62), Expect = 7.2 Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 1/87 (1%) Frame = -2 Query: 294 VIFFNFIYILKFIFAFNI*TILQTFI*RIVHVLSKLY-YGHLIVF*HFLISAVGYILNS* 118 V + F+YI FI+ F I + ++ +++ ++ Y +L +F + I Y+ Sbjct: 7 VYIYMFMYIFIFIYIF-IYIYIYVYVYIYLYIYFYIFTYIYLYIFIYIYICLYIYLYIYL 65 Query: 117 FIFHFCQIMSYPIIFVFVISSYYICTY 37 +IF + I + I++ + IC Y Sbjct: 66 YIFTYIYIYLHIFIYLHIFIYICICLY 92 >AL162254-5|CAI16291.1| 324|Homo sapiens olfactory receptor, family 1, subfamily L, memberr RAS oncogene family) protein. Length = 324 Score = 28.7 bits (61), Expect = 9.6 Identities = 16/64 (25%), Positives = 34/64 (53%) Frame = -1 Query: 262 IHFCI*HMNYSSNIHLKNSSCVE*IILWPFNCFLTFSH*CGWVYFKLIIHISFLSNNVIS 83 I+ C+ N + + N C ++ +P +TFS+ ++ L+ ++F ++NVI Sbjct: 120 INRCVAICNPFHYVTVMNRRCCVLLLAFP----ITFSYFHSLLHVLLVNRLTFCTSNVIH 175 Query: 82 NYFC 71 ++FC Sbjct: 176 HFFC 179 >AB065492-1|BAC05744.1| 324|Homo sapiens seven transmembrane helix receptor protein. Length = 324 Score = 28.7 bits (61), Expect = 9.6 Identities = 16/64 (25%), Positives = 34/64 (53%) Frame = -1 Query: 262 IHFCI*HMNYSSNIHLKNSSCVE*IILWPFNCFLTFSH*CGWVYFKLIIHISFLSNNVIS 83 I+ C+ N + + N C ++ +P +TFS+ ++ L+ ++F ++NVI Sbjct: 120 INRCVAICNPFHYVTVMNRRCCVLLLAFP----ITFSYFHSLLHVLLVNRLTFCTSNVIH 175 Query: 82 NYFC 71 ++FC Sbjct: 176 HFFC 179 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 51,269,283 Number of Sequences: 237096 Number of extensions: 924266 Number of successful extensions: 1588 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1545 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1587 length of database: 76,859,062 effective HSP length: 83 effective length of database: 57,180,094 effective search space used: 3659526016 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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