Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0885
         (445 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    25   0.49 
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    24   0.65 
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   1.1  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   1.1  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    22   3.5  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   3.5  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   4.6  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    21   4.6  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    21   6.1  

>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 401 NNYKLKYNHTTEKIY 445
           NNYK  YN+  +K+Y
Sbjct: 94  NNYKYNYNNNCKKLY 108


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 24.2 bits (50), Expect = 0.65
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 401 NNYKLKYNHTTEKIY 445
           NNYK  YN+  +K+Y
Sbjct: 327 NNYKYNYNNYNKKLY 341


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 392 SYLNNYKLKYNHTTEKIY 445
           +Y NNY   YN+  +K+Y
Sbjct: 100 NYNNNYNNNYNNNYKKLY 117


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 392 SYLNNYKLKYNHTTEKIY 445
           +Y NNY   YN+  +K+Y
Sbjct: 100 NYNNNYNNNYNNNYKKLY 117


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 392 SYLNNYKLKYNHTTEKIY 445
           S  NNY   YN+  +K+Y
Sbjct: 92  SNYNNYNNNYNNYNKKLY 109


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 401 NNYKLKYNHTTEKIY 445
           NNY   YN+  +K+Y
Sbjct: 341 NNYNNNYNNNCKKLY 355


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 401 NNYKLKYNHTTEKIY 445
           NNY   YN+  +K+Y
Sbjct: 338 NNYNNNYNNNYKKLY 352


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 181 II*FTQHMNYSSNECLKNSSYVKC 252
           I+   ++  Y+ ++C K   YV+C
Sbjct: 108 IVAVCRNEEYTGDDCQKTYQYVQC 131


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 136 VYFKLIIHISFLSNNVISNYF 74
           +   +II + F   NVI +YF
Sbjct: 18  IQIPVIIQLPFCGPNVIDHYF 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,208
Number of Sequences: 438
Number of extensions: 2684
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)