BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0884 (271 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.012 SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26) 33 0.027 SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 31 0.19 SB_33357| Best HMM Match : Neur_chan_memb (HMM E-Value=8.3e-10) 30 0.34 SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.59 SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2) 29 0.78 SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.0 SB_53468| Best HMM Match : E-MAP-115 (HMM E-Value=4.2) 28 1.4 SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) 28 1.4 SB_13194| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.4 SB_11938| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.4 SB_7400| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.4 SB_40737| Best HMM Match : Extensin_2 (HMM E-Value=2.2) 27 1.8 SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.8 SB_2633| Best HMM Match : Drf_FH1 (HMM E-Value=4) 27 1.8 SB_45434| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.8 SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1) 27 1.8 SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5) 27 2.4 SB_52084| Best HMM Match : Vicilin_N (HMM E-Value=1.7) 27 2.4 SB_46623| Best HMM Match : LEA_2 (HMM E-Value=9.9) 27 2.4 SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05) 27 2.4 SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1 SB_54822| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1 SB_54769| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1 SB_20246| Best HMM Match : RVT_1 (HMM E-Value=1.4e-30) 27 3.1 SB_25832| Best HMM Match : fn3 (HMM E-Value=4.2e-08) 27 3.1 SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.1 SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.1 SB_53649| Best HMM Match : FKBP_C (HMM E-Value=4.1e-05) 26 4.1 SB_36094| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.1 SB_49246| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.1 SB_39075| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.1 SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 26 4.1 SB_38058| Best HMM Match : TP2 (HMM E-Value=0.072) 26 5.5 SB_21513| Best HMM Match : Extensin_2 (HMM E-Value=4) 26 5.5 SB_54456| Best HMM Match : EGF (HMM E-Value=2.3e-31) 26 5.5 SB_47087| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.5 SB_33399| Best HMM Match : Ank (HMM E-Value=0) 26 5.5 SB_26666| Best HMM Match : Pkinase (HMM E-Value=3.7e-38) 26 5.5 SB_24958| Best HMM Match : S-methyl_trans (HMM E-Value=1.6e-40) 26 5.5 SB_49312| Best HMM Match : Mucin (HMM E-Value=0.19) 25 7.2 SB_44542| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.2 SB_24471| Best HMM Match : Lectin_C (HMM E-Value=2.7e-12) 25 7.2 SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 25 7.2 SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) 25 7.2 SB_11461| Best HMM Match : NHL (HMM E-Value=0) 25 7.2 SB_5940| Best HMM Match : Antimicrobial_3 (HMM E-Value=2.4) 25 7.2 SB_3917| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.2 SB_1963| Best HMM Match : rve (HMM E-Value=0.022) 25 7.2 SB_41992| Best HMM Match : efhand (HMM E-Value=2.4e-10) 25 9.5 SB_41191| Best HMM Match : PadR (HMM E-Value=8.6) 25 9.5 SB_35377| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 25 9.5 SB_13566| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5 SB_13210| Best HMM Match : CtaG_Cox11 (HMM E-Value=3.2) 25 9.5 SB_4101| Best HMM Match : SRP19 (HMM E-Value=9.7) 25 9.5 SB_3212| Best HMM Match : APC10 (HMM E-Value=0.36) 25 9.5 SB_51220| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5 SB_50351| Best HMM Match : I-set (HMM E-Value=0.00016) 25 9.5 SB_37985| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5 SB_27390| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5 SB_25887| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 25 9.5 SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081) 25 9.5 SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27) 25 9.5 >SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 587 Score = 34.7 bits (76), Expect = 0.012 Identities = 20/36 (55%), Positives = 22/36 (61%) Frame = +2 Query: 122 PYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPV 229 P+H T + VP P PV S PQ KVPIP PYPV Sbjct: 447 PFH-TPPRVEHVPFPIPVH-SPPQIEKVPIPFPYPV 480 Score = 33.9 bits (74), Expect = 0.021 Identities = 17/32 (53%), Positives = 18/32 (56%) Frame = +2 Query: 155 VPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250 VPIP P V P +K P PYPV V V QP Sbjct: 472 VPIPFPYPVPSPPQIK---PMPYPVPVPVRQP 500 Score = 25.8 bits (54), Expect = 5.5 Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 1/23 (4%) Frame = +2 Query: 155 VPIPHPVAVSVPQYVK-VPIPQP 220 VPIP PV V+ P V+ VP P P Sbjct: 412 VPIPFPVPVNHPPRVEHVPFPVP 434 >SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26) Length = 2157 Score = 33.5 bits (73), Expect = 0.027 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +2 Query: 149 IGVPIPHPVAVSVPQYVKVPIPQPYPV 229 + VP+P PV V VP + + P+P P P+ Sbjct: 1092 VPVPVPVPVRVPVPMHQQSPLPMPRPI 1118 >SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) Length = 483 Score = 30.7 bits (66), Expect = 0.19 Identities = 19/45 (42%), Positives = 24/45 (53%) Frame = +2 Query: 104 HTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVT 238 H H P+ V V + VP PV V VP V+VP+P PV+ T Sbjct: 208 HHHHHHPFPVRV--PVRVPFRVPVRVPVP--VRVPVPIHSPVYPT 248 Score = 28.3 bits (60), Expect = 1.0 Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Frame = +2 Query: 98 HTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQP-YP 226 H H H P V V VP+ PV V VP VPI P YP Sbjct: 208 HHHHHHPFPVRVPVRVPFRVPVRVPVPVRVP----VPIHSPVYP 247 Score = 26.6 bits (56), Expect = 3.1 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = +2 Query: 158 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 253 P P V V VP V V +P P V V + P+ Sbjct: 214 PFPVRVPVRVPFRVPVRVPVPVRVPVPIHSPV 245 Score = 25.4 bits (53), Expect = 7.2 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +2 Query: 155 VPIPHPVAVSVPQYVKVPIPQPYPVHVTV 241 V +P V VP V VP+ P P+H V Sbjct: 217 VRVPVRVPFRVPVRVPVPVRVPVPIHSPV 245 >SB_33357| Best HMM Match : Neur_chan_memb (HMM E-Value=8.3e-10) Length = 306 Score = 29.9 bits (64), Expect = 0.34 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = +2 Query: 89 PEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYP 226 P+G + EHT ++ ++ I I +PV + V VP +P P Sbjct: 145 PKGSQNNEHTSNNYINILVTIRTEIVYPVRPVIGAAVAVPDRRPCP 190 >SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 259 Score = 29.1 bits (62), Expect = 0.59 Identities = 13/47 (27%), Positives = 23/47 (48%) Frame = +1 Query: 127 PCDRGEEDRSSDSPSGGCVGPAVREGAHTSTLPGPRHSGATYPVLFI 267 P G D + P V A++ + +ST+PGP + TY +++ Sbjct: 30 PLQAGSIDGTDQVPHDNAVWRAMQAKSSSSTIPGPPCARVTYQAVYL 76 >SB_7731| Best HMM Match : Extensin_2 (HMM E-Value=1.2) Length = 352 Score = 28.7 bits (61), Expect = 0.78 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Frame = +2 Query: 116 TKPYHVTVVKKIGV--PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250 +KP +K V P P +S P + +P+P P PV V QP Sbjct: 96 SKPMREDAKRKFLVLAPFPRMPLISPPLPMYIPVPVPQPVPQPVPQP 142 >SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1446 Score = 28.3 bits (60), Expect = 1.0 Identities = 15/45 (33%), Positives = 19/45 (42%) Frame = +2 Query: 113 HTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQ 247 HT P H+ +I P+PH + IP P P H T Q Sbjct: 976 HTSPAHLATASQITHPLPHRT---------ISIPYPSPPHTTSSQ 1011 >SB_53468| Best HMM Match : E-MAP-115 (HMM E-Value=4.2) Length = 583 Score = 27.9 bits (59), Expect = 1.4 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = +1 Query: 52 SARQRSAF*RMGARRPHAHRTHEAVPCDRGEEDRSSDSPS 171 S ++RS R +RPH R+HE +R EE+R+ + S Sbjct: 461 SHKERSQEKRSHEKRPHEERSHE----ERSEEERTHEERS 496 >SB_52222| Best HMM Match : SAPS (HMM E-Value=2.1e-37) Length = 1063 Score = 27.9 bits (59), Expect = 1.4 Identities = 12/43 (27%), Positives = 24/43 (55%) Frame = +2 Query: 128 HVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPIL 256 HV++ +G+P+ ++V P + V + P + +VE P+L Sbjct: 172 HVSLEVTVGLPVSLELSVGSPVLLDVSVKLPMLLESSVELPVL 214 >SB_13194| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 469 Score = 27.9 bits (59), Expect = 1.4 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +2 Query: 104 HTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 214 + + T PY V + V +P+ V V+VP YV V +P Sbjct: 58 YVDGTVPYVDVTVPYVDVTVPYNVDVTVP-YVDVTVP 93 Score = 27.5 bits (58), Expect = 1.8 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +2 Query: 104 HTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 214 + + T PY V + V +P+ V V+VP YV V +P Sbjct: 157 YVDVTVPYVDVTVPYVDVTVPYNVDVTVP-YVDVTVP 192 >SB_11938| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 272 Score = 27.9 bits (59), Expect = 1.4 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +2 Query: 104 HTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 214 + + T PY V + V +P+ V V+VP YV V +P Sbjct: 58 YVDGTVPYVDVTVPYVDVTVPYNVDVTVP-YVDVTVP 93 Score = 27.5 bits (58), Expect = 1.8 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +2 Query: 104 HTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 214 + + T PY V + V +P+ V V+VP YV V +P Sbjct: 157 YVDVTVPYVDVTVPYVDVTVPYNVDVTVP-YVDVTVP 192 >SB_7400| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1499 Score = 27.9 bits (59), Expect = 1.4 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = +2 Query: 149 IGVPIPHPVAVSVPQYVKVPIPQPYPVHVTV 241 + P P V V+ P V+VP P PV V V Sbjct: 839 VATPPPVRVTVATPPPVRVPAATPLPVRVPV 869 Score = 27.1 bits (57), Expect = 2.4 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = +2 Query: 122 PYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 253 P V V +P+ PVA P V++P+ P PV V V P+ Sbjct: 852 PPPVRVPAATPLPVRVPVATLPP--VRLPVATPPPVRVPVATPL 893 Score = 25.4 bits (53), Expect = 7.2 Identities = 11/22 (50%), Positives = 15/22 (68%) Frame = +2 Query: 185 VPQYVKVPIPQPYPVHVTVEQP 250 +P+Y+ VP+ P PV VTV P Sbjct: 832 LPRYI-VPVATPPPVRVTVATP 852 Score = 25.0 bits (52), Expect = 9.5 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = +2 Query: 158 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 253 P+ PVA P V+VP+ P P++V + P+ Sbjct: 874 PVRLPVATPPP--VRVPVATPLPLYVFLLLPL 903 >SB_40737| Best HMM Match : Extensin_2 (HMM E-Value=2.2) Length = 409 Score = 27.5 bits (58), Expect = 1.8 Identities = 11/51 (21%), Positives = 23/51 (45%) Frame = +2 Query: 98 HTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250 HT+ + PYH+ ++ P + + P + + PY +++T P Sbjct: 17 HTYIIYASPYHIYII--YASPYHIYIMYASPYHTYIIYASPYHIYITYASP 65 Score = 25.0 bits (52), Expect = 9.5 Identities = 10/51 (19%), Positives = 21/51 (41%) Frame = +2 Query: 98 HTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250 HT+ + PYH ++ P + + P + + PY +++ P Sbjct: 97 HTYIIYASPYHTNII--YASPYHTYIIYASPYHTYIIYASPYHIYIIYASP 145 Score = 25.0 bits (52), Expect = 9.5 Identities = 10/51 (19%), Positives = 22/51 (43%) Frame = +2 Query: 98 HTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250 HT+ + PYH+ ++ P + + P ++ + PY ++ P Sbjct: 177 HTYIIYASPYHIYII--YASPYHTYITYASPYHICITYASPYHTYIIYAFP 225 >SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1283 Score = 27.5 bits (58), Expect = 1.8 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = +2 Query: 137 VVKKIGVPIPHPVAVSVPQ-YVKVPIPQPYPVHVTVEQPI 253 ++K + + P V+ P +P+P+P P H E P+ Sbjct: 1070 IIKTVTQEVETPPRVATPPGQPPLPVPRPAPAHAPAEVPL 1109 >SB_2633| Best HMM Match : Drf_FH1 (HMM E-Value=4) Length = 179 Score = 27.5 bits (58), Expect = 1.8 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 4/36 (11%) Frame = +2 Query: 158 PIPHPVAVSVPQY--VKVPIPQPYP--VHVTVEQPI 253 PI HP+ V +P +KV +P +P VH+ + PI Sbjct: 63 PIKHPIKVHLPNKHPIKVHLPNKHPIKVHLPNKHPI 98 >SB_45434| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 156 Score = 27.5 bits (58), Expect = 1.8 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = -1 Query: 241 HCDVDRVGLRYGHLHVLRDRHSH 173 H RV Y + HVL DRH H Sbjct: 2 HTSTSRVPKPYNYKHVLLDRHEH 24 >SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1) Length = 682 Score = 27.5 bits (58), Expect = 1.8 Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Frame = +2 Query: 137 VVKKIGVPIPHPVAVSVPQ-YVKVPIPQPYPVHVTVEQPI 253 ++K + + P V+ P +P+P+P P H E P+ Sbjct: 203 IIKTVTQEVETPPRVATPPGQPPLPVPRPAPAHAPAEVPL 242 >SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5) Length = 752 Score = 27.1 bits (57), Expect = 2.4 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = -1 Query: 208 GHLHVLRDRHSHRMGNRNSDLLHH 137 G + R +HSHRM + +S++L H Sbjct: 163 GDAELSRKKHSHRMTSSDSEILKH 186 >SB_52084| Best HMM Match : Vicilin_N (HMM E-Value=1.7) Length = 520 Score = 27.1 bits (57), Expect = 2.4 Identities = 10/24 (41%), Positives = 16/24 (66%) Frame = -1 Query: 208 GHLHVLRDRHSHRMGNRNSDLLHH 137 G + R +HSHRM + +S++L H Sbjct: 73 GDAELSRKKHSHRMTSSDSEILKH 96 >SB_46623| Best HMM Match : LEA_2 (HMM E-Value=9.9) Length = 196 Score = 27.1 bits (57), Expect = 2.4 Identities = 12/43 (27%), Positives = 24/43 (55%) Frame = +2 Query: 128 HVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPIL 256 HV++ +G+P+ ++V P + V + P + +VE P+L Sbjct: 92 HVSLEGTVGLPVLLELSVGSPVLLDVSVKLPMLLESSVELPVL 134 >SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05) Length = 397 Score = 27.1 bits (57), Expect = 2.4 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%) Frame = -1 Query: 223 VGLRYGHLHV--LRDRHSHRMGNRNSDLLHHGHMVR 122 + LRYGH+H+ + D + +S L HGH+ R Sbjct: 69 LALRYGHVHIADMIDNYPMAPPKTSSKLWLHGHLDR 104 >SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 999 Score = 26.6 bits (56), Expect = 3.1 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 1/52 (1%) Frame = +1 Query: 91 RRPHAHR-THEAVPCDRGEEDRSSDSPSGGCVGPAVREGAHTSTLPGPRHSG 243 + PHA+R T A D EE+ +S G G P PR+ G Sbjct: 551 KSPHANRRTKFAHSDDESEEEYTSRKRGVGSKGDTAENSMRRKPKPSPRNKG 602 >SB_54822| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1652 Score = 26.6 bits (56), Expect = 3.1 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Frame = -3 Query: 137 RSHGTASC-VLCACGLRAPILQKAERWRALLREGR 36 +S G+A C + CA G R P Q A L++G+ Sbjct: 420 KSGGSARCRISCASGQRTPFCQVPTTSEAFLKKGK 454 >SB_54769| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 168 Score = 26.6 bits (56), Expect = 3.1 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -1 Query: 181 HSHRMGNRNSDLLHHGHMVRLRV 113 +S +G SDLLH G +VR RV Sbjct: 42 NSRGVGGHTSDLLHGGCLVRTRV 64 >SB_20246| Best HMM Match : RVT_1 (HMM E-Value=1.4e-30) Length = 1191 Score = 26.6 bits (56), Expect = 3.1 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = -1 Query: 154 SDLLHHGHMVRLRVFCVRVAFGLPFFRRPSAGE 56 S L +H H RL +C ++A PF + P E Sbjct: 19 STLEYHRHNKRLTTWCQKMASSTPFVKPPKVLE 51 >SB_25832| Best HMM Match : fn3 (HMM E-Value=4.2e-08) Length = 313 Score = 26.6 bits (56), Expect = 3.1 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = +1 Query: 121 AVPCDRGEEDRSSDSPSGGCVGPAVREGAHTS 216 A P + G + SDS + G VGPA EGA T+ Sbjct: 187 ATPSNTGARE-GSDSATVGSVGPAHGEGACTT 217 >SB_18606| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1401 Score = 26.6 bits (56), Expect = 3.1 Identities = 12/47 (25%), Positives = 21/47 (44%) Frame = +2 Query: 113 HTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 253 H+ + + ++ P+P P V Q + P P P VT +P+ Sbjct: 961 HSLDGTLATIPELPTPVPSPRLVPSTQPSQASSPNPQPCEVTRPRPL 1007 >SB_58981| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 794 Score = 26.2 bits (55), Expect = 4.1 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 3/64 (4%) Frame = +2 Query: 68 RPSEEWEPEGHTHTEHTKPYH---VTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVT 238 +PS P+ H +T HT H V + K P+ S P V P QP VH Sbjct: 709 QPSNVHTPDNHLNTVHTPDNHPSTVHIPDKQLSPVHTQDNQSSP--VHTPDNQPSTVHTP 766 Query: 239 VEQP 250 QP Sbjct: 767 DNQP 770 >SB_53649| Best HMM Match : FKBP_C (HMM E-Value=4.1e-05) Length = 639 Score = 26.2 bits (55), Expect = 4.1 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Frame = +2 Query: 71 PSEEWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP-QPYP 226 P E EPE T + P+H G P PH PQ + P P QP+P Sbjct: 452 PEEHVEPEPTLATGSSNPHH------HGNPHPHGNPRPKPQLPQRPTPIQPHP 498 >SB_36094| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 64 Score = 26.2 bits (55), Expect = 4.1 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = -3 Query: 215 EVWAPSRTAGPTQPPDGESELRSSSPRS 132 E+ S+T P QPP+ + E P S Sbjct: 23 EIKGASKTTPPNQPPEPDDETMEQQPES 50 >SB_49246| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 90 Score = 26.2 bits (55), Expect = 4.1 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +3 Query: 207 PYLNPTRSTSQWSNLSCPVYK 269 P LNP+ +T W N S P+++ Sbjct: 5 PSLNPSFTTPMWKNKSTPMWR 25 >SB_39075| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 105 Score = 26.2 bits (55), Expect = 4.1 Identities = 11/40 (27%), Positives = 20/40 (50%) Frame = -1 Query: 235 DVDRVGLRYGHLHVLRDRHSHRMGNRNSDLLHHGHMVRLR 116 D R +R H +RD+H +R+ + + H+ R+R Sbjct: 50 DKHRNRIRDNKRHAIRDKHRNRIRDNKRHAIRDKHIQRIR 89 >SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) Length = 453 Score = 26.2 bits (55), Expect = 4.1 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = -1 Query: 205 HLHVLRDRHSHRMGNRNSDLLHHGHMVRLRVF 110 H H R RH HR +R+ HH + R R F Sbjct: 323 HHHHQRHRHRHRHRHRHHHHHHHEYNRRHRYF 354 >SB_38058| Best HMM Match : TP2 (HMM E-Value=0.072) Length = 399 Score = 25.8 bits (54), Expect = 5.5 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = +2 Query: 125 YHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTV 241 Y V+V K+ V PV P KVP+ PV+ V Sbjct: 62 YKVSVNYKVSVNYKFPVNYKFPVNYKVPVNYKVPVNYKV 100 Score = 25.8 bits (54), Expect = 5.5 Identities = 14/39 (35%), Positives = 18/39 (46%) Frame = +2 Query: 125 YHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTV 241 Y V K+ V PV VP KVP+ +PV+ V Sbjct: 122 YKFPVNYKVSVNYKVPVNYKVPVNYKVPVNYKFPVNYKV 160 >SB_21513| Best HMM Match : Extensin_2 (HMM E-Value=4) Length = 484 Score = 25.8 bits (54), Expect = 5.5 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = +2 Query: 119 KPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVT 238 +P+ +V V PHP SV +V PQP+ V+ Sbjct: 347 QPHKASVSTAPQVTAPHPHKASVSTAPQVTAPQPHKASVS 386 >SB_54456| Best HMM Match : EGF (HMM E-Value=2.3e-31) Length = 491 Score = 25.8 bits (54), Expect = 5.5 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 6/36 (16%) Frame = +2 Query: 161 IPHPVAVSVPQY--VKVPIPQPY----PVHVTVEQP 250 +P PV V+ P + ++P P P+ P+H TV+ P Sbjct: 266 VPFPVMVNRPVHHTERIPFPVPFVVNRPIHHTVQVP 301 Score = 25.4 bits (53), Expect = 7.2 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +2 Query: 155 VPIPHPVAVSVPQYVKVPIPQPYPV 229 +P P P V+ P + V +P P PV Sbjct: 282 IPFPVPFVVNRPIHHTVQVPYPVPV 306 >SB_47087| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 332 Score = 25.8 bits (54), Expect = 5.5 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Frame = -3 Query: 146 SSPRSHGTASCVLCACGLRA-PILQKAERWRALLREGRLL 30 SS + + C+LC CG+ A +L E W LLR+ + L Sbjct: 155 SSVQEYFDFECMLC-CGIPAIEMLGSKEDWENLLRKAKQL 193 >SB_33399| Best HMM Match : Ank (HMM E-Value=0) Length = 1416 Score = 25.8 bits (54), Expect = 5.5 Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Frame = +2 Query: 116 TKPYHVTVVKKIGVPIPHPVAVSVPQYVKV-PIPQPYP 226 ++P +T + P+PH + + P Y P+P P Sbjct: 1201 SQPLFITTPGALFTPLPHETSATSPPYTSASPVPTTTP 1238 >SB_26666| Best HMM Match : Pkinase (HMM E-Value=3.7e-38) Length = 1215 Score = 25.8 bits (54), Expect = 5.5 Identities = 16/51 (31%), Positives = 21/51 (41%) Frame = +2 Query: 77 EEWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPV 229 +E PE + P H + + V P P S P VPI Q YP+ Sbjct: 810 DEDAPEYIDQVSSSPPQHDYMPTQASVSSPVPSPPSSPLVSAVPINQRYPL 860 >SB_24958| Best HMM Match : S-methyl_trans (HMM E-Value=1.6e-40) Length = 560 Score = 25.8 bits (54), Expect = 5.5 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +2 Query: 71 PSEEWEPEGHTHTEHTKPYHVTVVK 145 P W EG TH E +KP + VK Sbjct: 67 PYSTWTLEGWTHKERSKPTSYSQVK 91 >SB_49312| Best HMM Match : Mucin (HMM E-Value=0.19) Length = 925 Score = 25.4 bits (53), Expect = 7.2 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = +2 Query: 68 RPSEEWEPEGHTHTEHTKPYH 130 RPSEE +P G+ H K H Sbjct: 495 RPSEEIDPSGYVHMPSVKRPH 515 >SB_44542| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 486 Score = 25.4 bits (53), Expect = 7.2 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +2 Query: 170 PVAVSVPQYVKVPIPQPYPVHVTVEQ 247 P+ VP+ KV P PV +T EQ Sbjct: 8 PMGKRVPKVAKVKNKAPAPVQITAEQ 33 >SB_24471| Best HMM Match : Lectin_C (HMM E-Value=2.7e-12) Length = 695 Score = 25.4 bits (53), Expect = 7.2 Identities = 10/25 (40%), Positives = 13/25 (52%) Frame = -3 Query: 227 PGRVEVWAPSRTAGPTQPPDGESEL 153 PG AP+ PTQPP G ++ Sbjct: 26 PGASTTIAPAPAPAPTQPPSGGGDV 50 >SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) Length = 1728 Score = 25.4 bits (53), Expect = 7.2 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +2 Query: 107 TEHTKPY-HVTVVKKIGVPIPHPVAVSVPQYVKV 205 ++ KPY H V+KI VP+ + QY+KV Sbjct: 297 SQDIKPYTHARTVEKIVVPLGDQIVRVKTQYLKV 330 >SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) Length = 2436 Score = 25.4 bits (53), Expect = 7.2 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -3 Query: 188 GPTQPPDGESELRSSSPRSHG 126 GP +P D + S SPRS G Sbjct: 881 GPNRPKDSDDTATSRSPRSKG 901 >SB_11461| Best HMM Match : NHL (HMM E-Value=0) Length = 819 Score = 25.4 bits (53), Expect = 7.2 Identities = 11/14 (78%), Positives = 11/14 (78%) Frame = +1 Query: 142 EEDRSSDSPSGGCV 183 E DRSSDS S GCV Sbjct: 649 EPDRSSDSQSTGCV 662 >SB_5940| Best HMM Match : Antimicrobial_3 (HMM E-Value=2.4) Length = 409 Score = 25.4 bits (53), Expect = 7.2 Identities = 19/55 (34%), Positives = 25/55 (45%) Frame = +2 Query: 77 EEWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTV 241 EE H H + HVTV + V + V V+V +V V + VHVTV Sbjct: 46 EEERVSLHVHVTVSLHVHVTVSLHVHVTVSLHVHVTVSLHVHVTV--SLHVHVTV 98 Score = 25.0 bits (52), Expect = 9.5 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = +2 Query: 98 HTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTV 241 H H + HVTV + V + V V+V +V V + VHVTV Sbjct: 69 HVHVTVSLHVHVTVSLHVHVTVSLHVHVTVSLHVHVTV--SLHVHVTV 114 >SB_3917| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 38 Score = 25.4 bits (53), Expect = 7.2 Identities = 11/36 (30%), Positives = 18/36 (50%) Frame = +2 Query: 140 VKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQ 247 V K + P V V QY+ + P+ Y + T+E+ Sbjct: 2 VLKYVITFTMPAEVFVSQYIDISTPEYYMIKETIER 37 >SB_1963| Best HMM Match : rve (HMM E-Value=0.022) Length = 931 Score = 25.4 bits (53), Expect = 7.2 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +1 Query: 61 QRSAF*RMGARRPHAHRTHEAVPCDR 138 ++SA GA+ PHA H A CD+ Sbjct: 250 EKSAENEKGAKTPHAASNHIARKCDK 275 >SB_41992| Best HMM Match : efhand (HMM E-Value=2.4e-10) Length = 1303 Score = 25.0 bits (52), Expect = 9.5 Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%) Frame = +1 Query: 127 PCDRGEEDRSSDSPSG-GCVGPA 192 PC+RG + D+PSG G +GPA Sbjct: 683 PCERGPA-KPDDTPSGTGEIGPA 704 >SB_41191| Best HMM Match : PadR (HMM E-Value=8.6) Length = 276 Score = 25.0 bits (52), Expect = 9.5 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -2 Query: 111 SVCVWPSGSHSSEGRALASATKRRTTVVLKAIMLP 7 S C +P + S++ + + S TKR L A MLP Sbjct: 37 SSCSFPENATSTKSKLIHSNTKRDRNNNLSAPMLP 71 >SB_35377| Best HMM Match : Peptidase_A17 (HMM E-Value=0) Length = 1400 Score = 25.0 bits (52), Expect = 9.5 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = -2 Query: 105 CVWPSGSHSSEGRALASATKRRTTVVLK 22 CV+ G HS+ A S K R +V+K Sbjct: 385 CVYCKGKHSTHNCATVSDPKARKDIVVK 412 >SB_13566| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1008 Score = 25.0 bits (52), Expect = 9.5 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = -2 Query: 105 CVWPSGSHSSEGRALASATKRRTTVVLK 22 CV+ G HS+ A S K R +V+K Sbjct: 283 CVYCKGKHSTHNCATVSDPKARKDIVVK 310 >SB_13210| Best HMM Match : CtaG_Cox11 (HMM E-Value=3.2) Length = 478 Score = 25.0 bits (52), Expect = 9.5 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 3/41 (7%) Frame = +2 Query: 113 HTKPYHVTVVKKIG---VPIPHPVAVSVPQYVKVPIPQPYP 226 + KP + VV K G +PI HP P Y + PI P Sbjct: 60 NAKPASLQVVAKPGAPAIPIFHPSIQLAPHYSQPPIVHRQP 100 >SB_4101| Best HMM Match : SRP19 (HMM E-Value=9.7) Length = 699 Score = 25.0 bits (52), Expect = 9.5 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Frame = -2 Query: 102 VWPSGSHSSEGRALAS-ATKRRTTVVLKAIM 13 +W SG + ++ RAL S ATK R V + ++ Sbjct: 298 MWDSGKYKTKARALTSAATKTREAKVQEVLI 328 >SB_3212| Best HMM Match : APC10 (HMM E-Value=0.36) Length = 646 Score = 25.0 bits (52), Expect = 9.5 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = +2 Query: 140 VKKIGVPIPHPVAVSVPQY 196 VKK+ VP+P P+ +S +Y Sbjct: 29 VKKLTVPVPIPLQISSKEY 47 >SB_51220| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1601 Score = 25.0 bits (52), Expect = 9.5 Identities = 12/38 (31%), Positives = 20/38 (52%) Frame = +2 Query: 134 TVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQ 247 TV+K + + P V V QY+ P+ Y + T+E+ Sbjct: 1432 TVLKYV-ITFTMPAEVFVSQYIDTSTPEYYMIKETIER 1468 >SB_50351| Best HMM Match : I-set (HMM E-Value=0.00016) Length = 419 Score = 25.0 bits (52), Expect = 9.5 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = -3 Query: 200 SRTAGPTQPPDGESELRSSSPRSHGTASCVLCACGL 93 S+T PP G+S+ + SSP HGT + + L Sbjct: 253 SQTNNHLFPPTGQSD-KQSSPPPHGTVRQTIISSSL 287 >SB_37985| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 586 Score = 25.0 bits (52), Expect = 9.5 Identities = 13/61 (21%), Positives = 26/61 (42%) Frame = +2 Query: 89 PEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPILSCL* 268 PE T P + + P+ HP+A + + P+ +P+ ++ P+ + L Sbjct: 300 PENSLIDSKTTPLATPLDHSLATPLDHPLATPLDHPLATPL--DHPLATPLDHPLATPLD 357 Query: 269 G 271 G Sbjct: 358 G 358 >SB_27390| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 110 Score = 25.0 bits (52), Expect = 9.5 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = -2 Query: 153 PIFFTTVTWYGFVCSVCVW 97 PI TT+TW + VC+W Sbjct: 45 PIALTTLTWEMCLLYVCLW 63 >SB_25887| Best HMM Match : Peptidase_A17 (HMM E-Value=0) Length = 1378 Score = 25.0 bits (52), Expect = 9.5 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = -2 Query: 105 CVWPSGSHSSEGRALASATKRRTTVVLK 22 CV+ G HS+ A S K R +V+K Sbjct: 364 CVYCKGKHSTHNCATVSDPKARKDIVVK 391 >SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081) Length = 524 Score = 25.0 bits (52), Expect = 9.5 Identities = 11/26 (42%), Positives = 13/26 (50%) Frame = +2 Query: 158 PIPHPVAVSVPQYVKVPIPQPYPVHV 235 P P P P+ P P+P PVHV Sbjct: 272 PEPEPEPEPEPEPEPEPEPEPEPVHV 297 >SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27) Length = 522 Score = 25.0 bits (52), Expect = 9.5 Identities = 12/46 (26%), Positives = 17/46 (36%) Frame = +1 Query: 94 RPHAHRTHEAVPCDRGEEDRSSDSPSGGCVGPAVREGAHTSTLPGP 231 RP +P DR E S+ + C+ P + T P P Sbjct: 387 RPRHRPAQRPLPADRRSEPLSAKTIVSSCLAPLLVRPLETIPAPAP 432 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,963,035 Number of Sequences: 59808 Number of extensions: 221072 Number of successful extensions: 1042 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 887 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1027 length of database: 16,821,457 effective HSP length: 66 effective length of database: 12,874,129 effective search space used: 296104967 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -