Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0884
(271 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical pr... 39 6e-04
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 35 0.007
L15313-8|AAA28196.1| 469|Caenorhabditis elegans Hypothetical pr... 31 0.15
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 30 0.20
U53151-2|AAN73859.1| 385|Caenorhabditis elegans Serpentine rece... 30 0.26
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 29 0.34
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 29 0.34
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 29 0.34
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 29 0.34
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 29 0.34
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 29 0.34
Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical pr... 28 0.79
Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical pr... 28 0.79
Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical p... 28 0.79
Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical p... 28 0.79
U41036-5|AAV28332.1| 475|Caenorhabditis elegans Hypothetical pr... 28 0.79
AF022974-9|AAC48035.3| 566|Caenorhabditis elegans Hypothetical ... 27 1.8
AF016682-3|AAB66186.2| 308|Caenorhabditis elegans Hypothetical ... 27 1.8
U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to tran... 27 2.4
U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to tran... 27 2.4
Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z46241-10|CAH19082.1| 268|Caenorhabditis elegans Hypothetical p... 26 3.2
Z46241-9|CAA86322.2| 270|Caenorhabditis elegans Hypothetical pr... 26 3.2
U41009-8|AAA82282.2| 500|Caenorhabditis elegans Hypothetical pr... 26 3.2
AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAue... 26 3.2
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 26 3.2
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 26 3.2
U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical pr... 26 4.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 26 4.2
Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z50044-4|CAA90356.1| 164|Caenorhabditis elegans Hypothetical pr... 25 5.6
U40030-2|AAR12978.2| 292|Caenorhabditis elegans Hypothetical pr... 25 5.6
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 25 5.6
AF106575-10|AAC78167.1| 153|Caenorhabditis elegans Hypothetical... 25 5.6
AF098986-6|AAC67427.1| 484|Caenorhabditis elegans Hypothetical ... 25 5.6
Z69383-4|CAA93411.2| 326|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical pr... 25 7.3
U61945-3|AAB03126.2| 451|Caenorhabditis elegans Hypothetical pr... 25 7.3
U39850-7|AAM45370.1| 573|Caenorhabditis elegans Polyq (poly glu... 25 7.3
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 25 7.3
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 25 7.3
AC006610-4|AAK85450.1| 246|Caenorhabditis elegans Hypothetical ... 25 7.3
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 25 9.7
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 25 9.7
U29535-11|AAK31456.1| 947|Caenorhabditis elegans Hypothetical p... 25 9.7
AL132949-34|CAB61101.3| 574|Caenorhabditis elegans Hypothetical... 25 9.7
AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical ... 25 9.7
>U46675-2|AAB52644.1| 125|Caenorhabditis elegans Hypothetical
protein F35A5.5 protein.
Length = 125
Score = 38.7 bits (86), Expect = 6e-04
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 122 PYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPILSC 262
P + + P+P PV V +P + +P+P P PV V V+ SC
Sbjct: 6 PIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPVPVQSNCCSC 52
Score = 34.7 bits (76), Expect = 0.009
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 149 IGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 253
I +PIP PV V P VP+P P P+ + + P+
Sbjct: 5 IPIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPV 39
Score = 33.5 bits (73), Expect = 0.021
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 122 PYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTV 241
P + + + VP P P V VP + +P+P P PV V V
Sbjct: 4 PIPIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPVPVPV 43
Score = 32.3 bits (70), Expect = 0.048
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 155 VPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 253
+P P P+ + P V P+PQP PV + + P+
Sbjct: 1 MPPPIPIPIPAPVPVPAPVPQPVPVPMPMPMPM 33
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 35.1 bits (77), Expect = 0.007
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 155 VPIPHPVAVSVPQYVKVPIPQPYPVH 232
VP+P PV V VP V VP+P P PV+
Sbjct: 156 VPVPVPVQVPVPIRVPVPVPVPTPVY 181
Score = 29.9 bits (64), Expect = 0.26
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +2
Query: 104 HTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTV 241
H P V V ++ VP+P P V P Y VP P P P V
Sbjct: 155 HVPVPVPVQVPVPIRVPVPVPVPTPVYQPTYCAVP-PCPAPAATPV 199
Score = 28.3 bits (60), Expect = 0.79
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 158 PIPHPVAVS-VPQYVKVPIPQ--PYPVHVTVEQPI 253
P P PVA V Q+V VP+P P P+ V V P+
Sbjct: 142 PCPAPVAPQPVIQHVPVPVPVQVPVPIRVPVPVPV 176
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 164 PHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250
P PV VP V V +P P V V V P
Sbjct: 149 PQPVIQHVPVPVPVQVPVPIRVPVPVPVP 177
>L15313-8|AAA28196.1| 469|Caenorhabditis elegans Hypothetical
protein ZK353.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.15
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +2
Query: 146 KIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVE 244
++ P P P V VP PIP P PV ++
Sbjct: 125 QLSTPSPSPAPVQVPASTDAPIPAPTPVTAPIQ 157
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 30.3 bits (65), Expect = 0.20
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 131 VTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPV 229
V V + P+P PV VP+ PI +P PV
Sbjct: 108 VAVTLPVPEPVPEPVPEPVPESTPEPISEPLPV 140
Score = 27.9 bits (59), Expect = 1.0
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 149 IGVPIPHPVAVSVPQYVKVPIPQPY--PVHVTVEQP 250
+ +P+P PV VP+ V P+P P+ V E+P
Sbjct: 110 VTLPVPEPVPEPVPEPVPESTPEPISEPLPVVQEEP 145
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 140 VKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPIL 256
V K+ V +P P V P+ V P+P+ P ++ P++
Sbjct: 105 VPKVAVTLPVPEPV--PEPVPEPVPESTPEPISEPLPVV 141
>U53151-2|AAN73859.1| 385|Caenorhabditis elegans Serpentine
receptor, class r protein10 protein.
Length = 385
Score = 29.9 bits (64), Expect = 0.26
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 171 GWGIGTPIFFTTVTWYGFVCSVCVW 97
GWG G FF +GFVCS+CV+
Sbjct: 72 GWGEGN--FFGYSALFGFVCSLCVF 94
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 29.5 bits (63), Expect = 0.34
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 158 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250
P P P V P+ V + P P PV + VE+P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 1669
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 29.5 bits (63), Expect = 0.34
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 158 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250
P P P V P+ V + P P PV + VE+P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 1669
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 29.5 bits (63), Expect = 0.34
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 158 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250
P P P V P+ V + P P PV + VE+P
Sbjct: 460 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 490
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 29.5 bits (63), Expect = 0.34
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 158 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250
P P P V P+ V + P P PV + VE+P
Sbjct: 460 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 490
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 29.5 bits (63), Expect = 0.34
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 158 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250
P P P V P+ V + P P PV + VE+P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 1669
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 29.5 bits (63), Expect = 0.34
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 158 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250
P P P V P+ V + P P PV + VE+P
Sbjct: 1639 PEPEPEPVPEPEPVVISEPVPEPVPIVVEEP 1669
>Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 28.3 bits (60), Expect = 0.79
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +2
Query: 80 EWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 214
E EPE + E K ++ KK+ P P P P V VP+P
Sbjct: 749 EQEPESESEPEPAKKTKRSL-KKVKEPEPEPEEYEQPTPVPVPVP 792
>Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 28.3 bits (60), Expect = 0.79
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +2
Query: 80 EWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 214
E EPE + E K ++ KK+ P P P P V VP+P
Sbjct: 747 EQEPESESEPEPAKKTKRSL-KKVKEPEPEPEEYEQPTPVPVPVP 790
>Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 28.3 bits (60), Expect = 0.79
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +2
Query: 80 EWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 214
E EPE + E K ++ KK+ P P P P V VP+P
Sbjct: 749 EQEPESESEPEPAKKTKRSL-KKVKEPEPEPEEYEQPTPVPVPVP 792
>Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 28.3 bits (60), Expect = 0.79
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +2
Query: 80 EWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIP 214
E EPE + E K ++ KK+ P P P P V VP+P
Sbjct: 747 EQEPESESEPEPAKKTKRSL-KKVKEPEPEPEEYEQPTPVPVPVP 790
>U41036-5|AAV28332.1| 475|Caenorhabditis elegans Hypothetical
protein T14E8.4 protein.
Length = 475
Score = 28.3 bits (60), Expect = 0.79
Identities = 12/51 (23%), Positives = 23/51 (45%)
Frame = +2
Query: 71 PSEEWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPY 223
P+ +++P T + +V + G P+ P + P+ V +P PY
Sbjct: 241 PNSKFKPRPTTSQSNGPVIKTVIVDERGAPMNQPTSTQKPKVVHKFLPNPY 291
>AF022974-9|AAC48035.3| 566|Caenorhabditis elegans Hypothetical
protein F26G5.1 protein.
Length = 566
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +2
Query: 95 GHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYV-KVPIPQPYPVHV 235
G E T H ++G PIP +V P Y+ + P+P P +
Sbjct: 412 GPAEVESTPRNHPAKKDQLGEPIPSRSSVPTPGYLTQEPLPSSLPFQI 459
>AF016682-3|AAB66186.2| 308|Caenorhabditis elegans Hypothetical
protein T07D3.6 protein.
Length = 308
Score = 27.1 bits (57), Expect = 1.8
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 155 VPIPHPVAVSVPQYVKVPIP 214
VPI HP +S+ +K+P+P
Sbjct: 82 VPIYHPTCISILSQMKLPVP 101
>U13642-8|AAG00040.1| 428|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform a
protein.
Length = 428
Score = 26.6 bits (56), Expect = 2.4
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -1
Query: 229 DRVGLRYGHLHVLRDRHSHRMGNRNS-DLLHHGH 131
++V GH+H HSH G+ +S D HGH
Sbjct: 339 EQVPYSNGHIHKSEGNHSHDNGHGHSHDHNDHGH 372
>U13642-7|AAZ32791.1| 446|Caenorhabditis elegans Similar to
transporter of divalentcations protein 1, isoform b
protein.
Length = 446
Score = 26.6 bits (56), Expect = 2.4
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -1
Query: 229 DRVGLRYGHLHVLRDRHSHRMGNRNS-DLLHHGH 131
++V GH+H HSH G+ +S D HGH
Sbjct: 357 EQVPYSNGHIHKSEGNHSHDNGHGHSHDHNDHGH 390
>Z81135-1|CAB03453.1| 627|Caenorhabditis elegans Hypothetical
protein W01G7.1 protein.
Length = 627
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 146 KIGVPIPHPVAVSVPQYVKVPIPQPYPV 229
K+ +PI P VS P V PIP P+
Sbjct: 554 KLPLPIVTPPVVSTPAPVITPIPAALPI 581
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/55 (21%), Positives = 24/55 (43%)
Frame = +2
Query: 89 PEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 253
P+ + ++ + HV + P P+ + P Y P P+P T ++P+
Sbjct: 14 PQAYGQNQNQQYQHVQQFSQFSQPSAAPLNNAPPNYAANPF--PFPTATTSQEPV 66
>Z46241-10|CAH19082.1| 268|Caenorhabditis elegans Hypothetical
protein C38D4.6b protein.
Length = 268
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 158 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250
P P V+ P Y +P QP+P+ + QP
Sbjct: 20 PTTVPADVTWPHYPMMPFMQPHPLREKMLQP 50
>Z46241-9|CAA86322.2| 270|Caenorhabditis elegans Hypothetical
protein C38D4.6a protein.
Length = 270
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 158 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250
P P V+ P Y +P QP+P+ + QP
Sbjct: 20 PTTVPADVTWPHYPMMPFMQPHPLREKMLQP 50
>U41009-8|AAA82282.2| 500|Caenorhabditis elegans Hypothetical
protein C06E7.4 protein.
Length = 500
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 89 PEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKV 205
P H H H + H V+K PI + V V + KV
Sbjct: 259 PHHHNHHNHQQLQHHQVIKSPQPPITKTIEVKVERSEKV 297
>AY438643-1|AAR00670.1| 627|Caenorhabditis elegans abnormal DAuer
Formation DAF-5,a Ski oncogene homolog involved in a
neuronal TGF betapathway (71.0 kD) (daf-5) protein.
Length = 627
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 146 KIGVPIPHPVAVSVPQYVKVPIPQPYPV 229
K+ +PI P VS P V PIP P+
Sbjct: 554 KLPLPIVTPPVVSTPAPVITPIPAALPI 581
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 86 EPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYP 226
E T T + + TV K +GV +P P+ ++P + V + P P
Sbjct: 1555 ESAHQTQTLRSAVHTPTVPKILGVTVPEPLRSTIPG-ITVDLVDPVP 1600
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 164 PHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250
P PV V PQ+ P P+P P QP
Sbjct: 2021 PQPVVVQRPQFRPQPQPRPQPQPQPQPQP 2049
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/48 (25%), Positives = 19/48 (39%)
Frame = +2
Query: 86 EPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPV 229
+P H E + T+++K P P PV Q P+ Y +
Sbjct: 1690 QPAEPNHVEEYQNTVDTIIEKSATPAPAPVTQPAVQPAPGPVEHRYEI 1737
>U41017-1|AAC48211.1| 343|Caenorhabditis elegans Hypothetical
protein T26C11.2 protein.
Length = 343
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 119 KPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYP 226
KP+ ++ +P P P+ S P+ P P P+P
Sbjct: 75 KPFPKPMLFPKPMPFPKPMPKSKPKSEPFPNPMPFP 110
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +2
Query: 158 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250
P P P+ S P+ P P P+P + +P
Sbjct: 16 PFPKPMPKSKPKSEPFPSPMPFPKPMPKPKP 46
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +2
Query: 155 VPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250
+P P P+ S P+ P P P+P + +P
Sbjct: 151 MPFPKPMPKSKPKSEPFPNPMPFPKPMPKPKP 182
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +2
Query: 158 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 253
P P P + P+ + +P P P+P + +P+
Sbjct: 120 PKPFPKPMLFPKPMPIPKPMPFPKPMLFPKPM 151
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 119 KPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPV 229
KP+ ++ +PIP P+ P P+P P P+
Sbjct: 121 KPFPKPMLFPKPMPIPKPMPFPKPMLFPKPMPFPKPM 157
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +2
Query: 155 VPIPHPVAVSVPQYVKVPIPQPYPVHVTVE 244
VP+ PV V P + P+P P P + +
Sbjct: 1111 VPVAAPVPVPTPFTIPPPVPPPPPTATSTQ 1140
>Z83120-6|CAB76722.1| 809|Caenorhabditis elegans Hypothetical
protein R06A4.9 protein.
Length = 809
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = -3
Query: 197 RTAGPTQPPDGESE-LRSSSPRSH 129
RT P QPP GE E R P SH
Sbjct: 697 RTMVPNQPPSGEPEHWRGPPPVSH 720
>Z50044-4|CAA90356.1| 164|Caenorhabditis elegans Hypothetical
protein F22B5.4 protein.
Length = 164
Score = 25.4 bits (53), Expect = 5.6
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = -2
Query: 153 PIFFTTVTWYGFVCSVCVWPSG 88
P+F T W+ CS W G
Sbjct: 81 PLFVLTAAWFVLFCSASYWSFG 102
>U40030-2|AAR12978.2| 292|Caenorhabditis elegans Hypothetical
protein T13C2.7 protein.
Length = 292
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 158 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPILSCL 265
P PHP+ V++P K I + VT E+P L CL
Sbjct: 186 PTPHPLEVNLPNRSKSHIGFLPEIVVTEERPKL-CL 220
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 154 SSDSPSGGCVGPAVREGAHTSTLPGPRHSGAT 249
S +S +G C GP+ R + TS G AT
Sbjct: 640 SPESGAGVCTGPSTRSQSITSVASGKTSRSAT 671
>AF106575-10|AAC78167.1| 153|Caenorhabditis elegans Hypothetical
protein K04F1.8 protein.
Length = 153
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -1
Query: 259 GQDRLLHCDVDRVGLRYGHLHVLRDRHSHRMGNRNSDLL 143
G++R L D+ + +R+G +H D +G +DL+
Sbjct: 98 GKNRFLKVDIGSIPIRHGWIHRTLDIELTNVGIVTTDLI 136
>AF098986-6|AAC67427.1| 484|Caenorhabditis elegans Hypothetical
protein C36C9.5 protein.
Length = 484
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 211 TSTLPGPRHSGATYPVL 261
TS LP P H+G+TY +L
Sbjct: 291 TSGLPRPGHNGSTYSML 307
>Z69383-4|CAA93411.2| 326|Caenorhabditis elegans Hypothetical
protein F13E9.9 protein.
Length = 326
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 205 HLHVLRDRHSHRMGNRNSD 149
HLHV RDRH H + + D
Sbjct: 256 HLHVHRDRHYHDERHAHQD 274
>Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical
protein T13H5.4 protein.
Length = 500
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 104 HTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPV 229
H E + +TV +KI + H V+ Q VK + + Y V
Sbjct: 12 HEERERLIDITVKEKIAEKLTHKAKVNSEQRVKTFVDRYYSV 53
>U61945-3|AAB03126.2| 451|Caenorhabditis elegans Hypothetical
protein C49C8.5 protein.
Length = 451
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -3
Query: 215 EVWAPSRTAGPTQPPDGESELRSSSPRSHGTAS 117
E+ + T GPT+PP ++L S T+S
Sbjct: 170 EITGTTPTPGPTEPPTTTAKLPSDCDEVESTSS 202
>U39850-7|AAM45370.1| 573|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform e
protein.
Length = 573
Score = 25.0 bits (52), Expect = 7.3
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = +1
Query: 82 MGARRPHAHRTHEAVPCDRGEEDRSSDSPSGGCVGPAVREGAHTSTLPGPRHS 240
M P +H R S DS G PA R AH S++PGP S
Sbjct: 1 MNVSSPSTQASHFNQFQKRPTSSASVDSNDDGVHIPAKRM-AHASSVPGPSRS 52
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 158 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250
PIP PV + P P+P P++ +E P
Sbjct: 157 PIPTPVPILEPPPPPPPVPPLSPLYKVLEIP 187
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +2
Query: 122 PYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHV 235
P +V ++ P P P A V Q P+P P P +
Sbjct: 60 PAPASVQQQPEAPAPAPTAPDVQQPGPAPVPVPEPAQL 97
>AC006610-4|AAK85450.1| 246|Caenorhabditis elegans Hypothetical
protein C30F12.4 protein.
Length = 246
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Frame = +2
Query: 158 PIPHPVAVSVP----QYVKVPIPQPYPVHVTVEQPILS 259
P P V VS+P QY+ + Q P + ++QPI++
Sbjct: 76 PQPQMVPVSMPMVQQQYMMPQMAQMMPQQIVMQQPIMT 113
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -2
Query: 168 WGIGTPIFFTTVTWYGFVCSVCVWPSGSHSSEGRA 64
WG + + T + + SVC WPS S G+A
Sbjct: 1266 WGRKVVMTCPSGTVFNPLLSVCDWPSAVPSCSGQA 1300
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 188 PQYVKVPIPQPYPVHVTVEQPILSC 262
P + +P+P P PV P L+C
Sbjct: 778 PPFFALPVPPPPPVPPPPPPPFLTC 802
>Z70203-2|CAA94105.1| 685|Caenorhabditis elegans Hypothetical
protein C05G5.2 protein.
Length = 685
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 137 VVKKIGVPI-PHPVA-VSVPQYVKVPIPQPYPV 229
V K +P+ P+ V VP+ V +P P+P PV
Sbjct: 501 VAKTESIPVVKKPIEPVVVPKAVDIPAPKPTPV 533
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 24.6 bits (51), Expect = 9.7
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 140 VKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250
V+K P+P PV P V P P PV + P
Sbjct: 207 VEKAPEPVPAPVEQIAPPPAPVQDPAPAPVEPSDPAP 243
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +2
Query: 158 PIPHPV-AVSVPQYVKVPIPQPYPVHVTVEQP 250
P P PV A + + P+PQPYP P
Sbjct: 407 PTPPPVLAPVINTATQPPLPQPYPTRYRPAPP 438
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -3
Query: 203 PSRTAGPTQPPDGESELRSSSPRSHGTASCVLCACGLRAP 84
P+RTA T+ + ++ +++P S SC C G P
Sbjct: 76 PARTARRTRRDNYGAQPIAANPPSSAAGSCCTCQVGPPGP 115
>U29535-11|AAK31456.1| 947|Caenorhabditis elegans Hypothetical
protein C25H3.11 protein.
Length = 947
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/55 (21%), Positives = 24/55 (43%)
Frame = +1
Query: 4 VRQHDRF*NNSRPSLSSARQRSAF*RMGARRPHAHRTHEAVPCDRGEEDRSSDSP 168
+ D N S P +++ Q S + P H+T ++VP + + ++ P
Sbjct: 817 MEMRDMIENTSYPLFTTSSQASQMKSISNSCPDLHKTEKSVPARQSKSHQNHHIP 871
>AL132949-34|CAB61101.3| 574|Caenorhabditis elegans Hypothetical
protein Y53F4B.27a protein.
Length = 574
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = -3
Query: 176 PPDGESELRSSSPRSHGTASCVLCACGLRAPILQKAERWRA 54
PP G +R + + SC +C+ +A + K W++
Sbjct: 67 PPSGNYAIRVENKKKSSLISCAVCSASGQATV--KFRHWQS 105
>AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical
protein R10F2.6 protein.
Length = 1150
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 212 VWAPSRTAGPTQPPDGESELRSSSPRSHGTASCV 111
+W P R P DG +LRS + +S + S V
Sbjct: 466 MWVPFRDVKPPYLHDGSDDLRSINSQSLSSQSDV 499
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,007,588
Number of Sequences: 27780
Number of extensions: 156327
Number of successful extensions: 818
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,740,198
effective HSP length: 68
effective length of database: 10,851,158
effective search space used: 227874318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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