Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0884
(271 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 29 0.32
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 29 0.32
At1g20790.1 68414.m02603 F-box family protein contains Pfam:PF00... 29 0.32
At4g38770.1 68417.m05490 proline-rich family protein (PRP4) simi... 29 0.56
At2g32000.1 68415.m03910 DNA topoisomerase family protein simila... 29 0.56
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 27 1.3
At4g26120.1 68417.m03760 ankyrin repeat family protein / BTB/POZ... 27 1.3
At3g57050.3 68416.m06352 cystathionine beta-lyase, chloroplast /... 27 1.3
At3g57050.2 68416.m06351 cystathionine beta-lyase, chloroplast /... 27 1.3
At3g57050.1 68416.m06350 cystathionine beta-lyase, chloroplast /... 27 1.3
At5g21160.1 68418.m02528 La domain-containing protein / proline-... 27 1.7
At4g32300.1 68417.m04596 lectin protein kinase family protein co... 27 1.7
At3g17690.1 68416.m02258 cyclic nucleotide-binding transporter 2... 27 1.7
At1g07530.1 68414.m00806 scarecrow-like transcription factor 14 ... 27 2.2
At2g44270.1 68415.m05509 expressed protein contains Pfam profil... 26 3.0
At1g21790.1 68414.m02727 expressed protein 26 3.0
At4g22010.1 68417.m03185 multi-copper oxidase type I family prot... 26 3.9
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 26 3.9
At5g59570.1 68418.m07465 myb family transcription factor contain... 25 5.2
At5g35035.1 68418.m04138 hypothetical protein 25 5.2
At4g12470.1 68417.m01972 protease inhibitor/seed storage/lipid t... 25 5.2
At4g08380.1 68417.m01384 proline-rich extensin-like family prote... 25 5.2
At1g57870.1 68414.m06566 shaggy-related protein kinase kappa, pu... 25 5.2
At1g49730.3 68414.m05576 protein kinase family protein contains ... 25 5.2
At1g49730.2 68414.m05577 protein kinase family protein contains ... 25 5.2
At1g49730.1 68414.m05575 protein kinase family protein contains ... 25 5.2
At1g32870.1 68414.m04050 no apical meristem (NAM) family protein... 25 5.2
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 25 5.2
At1g09840.3 68414.m01108 shaggy-related protein kinase kappa / A... 25 5.2
At1g09840.2 68414.m01107 shaggy-related protein kinase kappa / A... 25 5.2
At1g09840.1 68414.m01106 shaggy-related protein kinase kappa / A... 25 5.2
At5g38850.1 68418.m04699 disease resistance protein (TIR-NBS-LRR... 25 6.8
At5g21070.1 68418.m02509 expressed protein 25 6.8
At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEME... 25 6.8
At3g61260.1 68416.m06856 DNA-binding family protein / remorin fa... 25 6.8
At3g52250.1 68416.m05742 myb family transcription factor contain... 25 6.8
At3g17700.1 68416.m02259 cyclic nucleotide-binding transporter 1... 25 6.8
At3g09430.1 68416.m01120 hypothetical protein 25 6.8
At2g38440.1 68415.m04721 expressed protein 25 6.8
At5g65165.1 68418.m08196 succinate dehydrogenase, iron-sulphur s... 25 9.0
At4g36730.2 68417.m05212 G-box binding factor 1 (GBF1) identical... 25 9.0
At4g36730.1 68417.m05211 G-box binding factor 1 (GBF1) identical... 25 9.0
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 25 9.0
At3g18050.1 68416.m02296 expressed protein 25 9.0
At3g01670.1 68416.m00098 expressed protein 25 9.0
At2g32930.1 68415.m04037 zinc finger (CCCH-type) family protein ... 25 9.0
At2g30480.2 68415.m03713 expressed protein 25 9.0
At2g30480.1 68415.m03712 expressed protein 25 9.0
At2g13820.1 68415.m01526 protease inhibitor/seed storage/lipid t... 25 9.0
At1g77970.1 68414.m09086 hydroxyproline-rich glycoprotein family... 25 9.0
At1g52030.2 68414.m05870 myrosinase-binding protein, putative (F... 25 9.0
At1g52030.1 68414.m05869 myrosinase-binding protein, putative (F... 25 9.0
At1g50610.1 68414.m05685 leucine-rich repeat transmembrane prote... 25 9.0
At1g16720.1 68414.m02005 expressed protein 25 9.0
At1g15460.1 68414.m01858 anion exchange family protein member of... 25 9.0
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 29.5 bits (63), Expect = 0.32
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 158 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250
P P P V+ + V PIP+P P ++ P
Sbjct: 130 PTPTPAPVAATETVTTPIPEPVPATISSSTP 160
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 29.5 bits (63), Expect = 0.32
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 158 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250
P P P V+ + V PIP+P P ++ P
Sbjct: 130 PTPTPAPVAATETVTTPIPEPVPATISSSTP 160
>At1g20790.1 68414.m02603 F-box family protein contains Pfam:PF00646
F-box domain
Length = 435
Score = 29.5 bits (63), Expect = 0.32
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = +2
Query: 128 HVTVVKKIGVPIPHPVAVSVPQYVKVPIPQP 220
H+ + + +P+P P+A+++P + +P+P P
Sbjct: 372 HMHMPMPMAMPMPMPIAMAMPMPMPMPMPMP 402
Score = 26.2 bits (55), Expect = 3.0
Identities = 10/44 (22%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 128 HVTVVKKIGVPIPHPVAVSVPQYVKVPIP--QPYPVHVTVEQPI 253
HV + + +P+P P+ + + ++ +P+P P P+ + + P+
Sbjct: 350 HVLMPMPMPMPMPMPMPMHMHMHMHMPMPMAMPMPMPIAMAMPM 393
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +2
Query: 128 HVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 253
HV V+ + +P+P P + +P ++ + + P P+ + + PI
Sbjct: 348 HVHVLMPMPMPMPMP--MPMPMHMHMHMHMPMPMAMPMPMPI 387
>At4g38770.1 68417.m05490 proline-rich family protein (PRP4) similar
to proline-rich protein [Arabidopsis thaliana]
gi|6782442|gb|AAF28388; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 448
Score = 28.7 bits (61), Expect = 0.56
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +2
Query: 110 EHTKPYHVTVVKKIGVPIPHPVAVSVPQYV--KVPIPQPYPVH 232
EH Y +VKK P P PV + P V K P P P PV+
Sbjct: 362 EHPPIYIPPIVKK---PCPPPVPIYKPPVVIPKKPCPPPVPVY 401
Score = 27.5 bits (58), Expect = 1.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 158 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQPI 253
P P P + +P ++K P P Y V V P+
Sbjct: 165 PFPLPPPLELPPFLKKPCPPKYSPPVEVPPPV 196
>At2g32000.1 68415.m03910 DNA topoisomerase family protein similar
to DNA topoisomerase III beta-1 (EC 5.99.1.2)(SP:Q9Z321)
{Mus musculus}
Length = 865
Score = 28.7 bits (61), Expect = 0.56
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -2
Query: 138 TVTWYGFVCSVCVWPSGSHSSEGRALASATKRRTTVVLKAIMLP 7
T T G CS+C P+ HS + + + + T+VL + P
Sbjct: 711 TKTGAGMPCSLCPHPTCQHSVRNQGVCACPECEGTLVLDPVSFP 754
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 27.5 bits (58), Expect = 1.3
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +2
Query: 68 RPSEEWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVH 232
RP ++ +P + + PY + V K P P PV S P V P P P PVH
Sbjct: 489 RPVQKPQPPKES-PQPDDPYDQSPVTKRRSPPPAPVN-SPPPPVYSPPPPPPPVH 541
>At4g26120.1 68417.m03760 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 600
Score = 27.5 bits (58), Expect = 1.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 145 LHHGHMVRLRVFCVRVAFGLPFFRRPS 65
+H H+ RLR C V G +F+R S
Sbjct: 486 IHEKHLSRLRALCKTVELGKRYFKRCS 512
>At3g57050.3 68416.m06352 cystathionine beta-lyase, chloroplast /
beta-cystathionase / cysteine lyase (CBL) identical to
SP|P53780 Cystathionine beta-lyase, chloroplast
precursor (EC 4.4.1.8) (CBL) (Beta-cystathionase)
(Cysteine lyase) {Arabidopsis thaliana}
Length = 378
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -3
Query: 230 GPGRVEVWAPSRTAGPTQPPDGESELRSSSPRSHGTASCVLCACGLRAPILQK 72
GP VW S PT P S++R S +H + VL + +P+L +
Sbjct: 215 GPQTKLVWLES----PTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSR 263
>At3g57050.2 68416.m06351 cystathionine beta-lyase, chloroplast /
beta-cystathionase / cysteine lyase (CBL) identical to
SP|P53780 Cystathionine beta-lyase, chloroplast
precursor (EC 4.4.1.8) (CBL) (Beta-cystathionase)
(Cysteine lyase) {Arabidopsis thaliana}
Length = 449
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -3
Query: 230 GPGRVEVWAPSRTAGPTQPPDGESELRSSSPRSHGTASCVLCACGLRAPILQK 72
GP VW S PT P S++R S +H + VL + +P+L +
Sbjct: 200 GPQTKLVWLES----PTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSR 248
>At3g57050.1 68416.m06350 cystathionine beta-lyase, chloroplast /
beta-cystathionase / cysteine lyase (CBL) identical to
SP|P53780 Cystathionine beta-lyase, chloroplast
precursor (EC 4.4.1.8) (CBL) (Beta-cystathionase)
(Cysteine lyase) {Arabidopsis thaliana}
Length = 464
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -3
Query: 230 GPGRVEVWAPSRTAGPTQPPDGESELRSSSPRSHGTASCVLCACGLRAPILQK 72
GP VW S PT P S++R S +H + VL + +P+L +
Sbjct: 215 GPQTKLVWLES----PTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSR 263
>At5g21160.1 68418.m02528 La domain-containing protein /
proline-rich family protein contains proline-rich
extensin domains, INTERPRO:IPR002965, PF05383: La domain
Length = 826
Score = 27.1 bits (57), Expect = 1.7
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +2
Query: 113 HTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHV 235
H PYH + VP+PH P + P P PYPV V
Sbjct: 129 HAVPYHPPPFPPM-VPLPHAAG---PDFPYAPYP-PYPVPV 164
>At4g32300.1 68417.m04596 lectin protein kinase family protein
contains Pfam domains, PF01453: Lectin (probable mannose
binding) and PF00069: Protein kinase domain
Length = 821
Score = 27.1 bits (57), Expect = 1.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 145 LHHGHMVRLRVFCVRVAFGLPFFRRPSAG 59
+HH H+VRLR FC A L + S G
Sbjct: 543 IHHLHLVRLRGFCAEGAHRLLAYEFLSKG 571
>At3g17690.1 68416.m02258 cyclic nucleotide-binding transporter 2 /
CNBT2 (CNGC19) identical to cyclic nucleotide-binding
transporter 2 (CNBT2) GI:8131900 from [Arabidopsis
thaliana]; member of the cyclic nucleotide-gated channel
family (CNGC)- see PMID:11500563
Length = 743
Score = 27.1 bits (57), Expect = 1.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -1
Query: 202 LHVLRDRHSHRMGNRNSDLLHHGHMVRLRVFCVR 101
L +R+R R R+S +LHH +V VF VR
Sbjct: 569 LDSIRERLKQRTYIRSSTVLHHRGLVEKMVFIVR 602
>At1g07530.1 68414.m00806 scarecrow-like transcription factor 14
(SCL14) identical to GB:AAD24412 from [Arabidopsis
thaliana] (Plant J. 18 (1), 111-119 (1999))
Length = 769
Score = 26.6 bits (56), Expect = 2.2
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1
Query: 55 ARQRSAF*RMGARRPHAHRTHEAVPCDRGEEDRSSDSPSGGCVGPAVREGAHTST 219
A ++S + +G + P + A D E +SDSP G C G A + A T+T
Sbjct: 114 AAEKSLYEALGEKYPSSS---SASSVDHPER-LASDSPDGSCSGGAFSDYASTTT 164
>At2g44270.1 68415.m05509 expressed protein contains Pfam profile
PF01171: PP-loop family
Length = 358
Score = 26.2 bits (55), Expect = 3.0
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 122 ASCVLCACGLRAPILQKAERWRALLRE 42
AS + C C LR P+L++ + + + RE
Sbjct: 10 ASRLCCLCNLRRPVLKRPKTLQQICRE 36
>At1g21790.1 68414.m02727 expressed protein
Length = 288
Score = 26.2 bits (55), Expect = 3.0
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -1
Query: 223 VGLRYGHLHVLRDRHSHRMGNRNSDLLHHG 134
VGL H R SHR N +L HG
Sbjct: 258 VGLGLDLFHAFRRERSHRRNQENGNLHDHG 287
>At4g22010.1 68417.m03185 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 541
Score = 25.8 bits (54), Expect = 3.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 224 GRVEVWAPSRTAGPTQPPDGE 162
G + VW+ R P PPDG+
Sbjct: 138 GAIRVWSRPRIPVPFSPPDGD 158
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 25.8 bits (54), Expect = 3.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 164 PHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250
PHP +V + K P +P+P TV+ P
Sbjct: 72 PHPKPPTVKPHPKPPTVKPHPKPPTVKPP 100
Score = 25.0 bits (52), Expect = 6.8
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 89 PEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSV-PQYVKVPI-PQPYPVHVTVEQP 250
P+ T H KP V K PHP +V P + K P P P+P V+ P
Sbjct: 65 PKPPTVKPHPKPPTVKPHPKPPTVKPHPKPPTVKPPHPKPPTKPHPHPKPPIVKPP 120
>At5g59570.1 68418.m07465 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 298
Score = 25.4 bits (53), Expect = 5.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 146 KIGVPIPHPVAVSVPQY 196
K+GVP+P P V +P Y
Sbjct: 235 KLGVPVPVPSMVPIPGY 251
>At5g35035.1 68418.m04138 hypothetical protein
Length = 147
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 180 TATGWGIGTPIFFTTVTWYGF 118
TA G+GT + TTVTW+ F
Sbjct: 18 TAPDRGLGTWVDKTTVTWFKF 38
>At4g12470.1 68417.m01972 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 161
Score = 25.4 bits (53), Expect = 5.2
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 143 KKIGVPIPHPVAVSVPQYVKVPIPQPYPV 229
K + P P PV P VP P P PV
Sbjct: 37 KPVPSPKPKPVQCPPPPRPSVPSPNPRPV 65
>At4g08380.1 68417.m01384 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 437
Score = 25.4 bits (53), Expect = 5.2
Identities = 14/51 (27%), Positives = 18/51 (35%)
Frame = +2
Query: 71 PSEEWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPY 223
P + P + + PY + P P A S P Y P P PY
Sbjct: 116 PPYAYSPPPSPYVYKSPPYVYSSPPPYVYSSPPPYAYSPPPYAYSPPPSPY 166
>At1g57870.1 68414.m06566 shaggy-related protein kinase kappa,
putative / ASK-kappa, putative similar to shaggy-related
protein kinase kappa SP:Q39019 GI:717180 from
[Arabidopsis thaliana]
Length = 420
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 131 VTVVKKIGVPIPHPVAVSVPQYVKVPIPQ--PYPVH 232
V ++K +G P + P Y + PQ P+P H
Sbjct: 293 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWH 328
>At1g49730.3 68414.m05576 protein kinase family protein contains
Pfam PF00069: Protein kinase domain; similar to AtPK2324
(GI:1785621) [Arabidopsis thaliana]; similar to
receptor-like protein kinase (GI:1644291) [Catharanthus
roseus]; similar to somatic embryogenesis receptor-like
kinase (GI:2224911) [Daucus carota]
Length = 394
Score = 25.4 bits (53), Expect = 5.2
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 101 THTEHTKPYHVTVVKKIGVPI 163
T + T PYH+T+V IG+ +
Sbjct: 184 TTSRSTNPYHLTMVPTIGIVV 204
>At1g49730.2 68414.m05577 protein kinase family protein contains
Pfam PF00069: Protein kinase domain; similar to AtPK2324
(GI:1785621) [Arabidopsis thaliana]; similar to
receptor-like protein kinase (GI:1644291) [Catharanthus
roseus]; similar to somatic embryogenesis receptor-like
kinase (GI:2224911) [Daucus carota]
Length = 450
Score = 25.4 bits (53), Expect = 5.2
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 101 THTEHTKPYHVTVVKKIGVPI 163
T + T PYH+T+V IG+ +
Sbjct: 240 TTSRSTNPYHLTMVPTIGIVV 260
>At1g49730.1 68414.m05575 protein kinase family protein contains
Pfam PF00069: Protein kinase domain; similar to AtPK2324
(GI:1785621) [Arabidopsis thaliana]; similar to
receptor-like protein kinase (GI:1644291) [Catharanthus
roseus]; similar to somatic embryogenesis receptor-like
kinase (GI:2224911) [Daucus carota]
Length = 663
Score = 25.4 bits (53), Expect = 5.2
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 101 THTEHTKPYHVTVVKKIGVPI 163
T + T PYH+T+V IG+ +
Sbjct: 240 TTSRSTNPYHLTMVPTIGIVV 260
>At1g32870.1 68414.m04050 no apical meristem (NAM) family protein
similar to to NAC2 (GI:645671) [Arabidopsis thaliana];
contains Pfam PF02365: No apical meristem (NAM) protein
Length = 528
Score = 25.4 bits (53), Expect = 5.2
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 262 TGQDRLLHCDVDRVG 218
TG+DR++HCD VG
Sbjct: 94 TGKDRVIHCDSRPVG 108
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +2
Query: 158 PIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250
P P PV P P P+P P H +P
Sbjct: 91 PAPKPVPCPSPPKPPAPTPKPVPPHGPPPKP 121
>At1g09840.3 68414.m01108 shaggy-related protein kinase kappa /
ASK-kappa (ASK10) identical to shaggy-related protein
kinase kappa SP:Q39019 GI:717180 from [Arabidopsis
thaliana]
Length = 421
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 131 VTVVKKIGVPIPHPVAVSVPQYVKVPIPQ--PYPVH 232
V ++K +G P + P Y + PQ P+P H
Sbjct: 294 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWH 329
>At1g09840.2 68414.m01107 shaggy-related protein kinase kappa /
ASK-kappa (ASK10) identical to shaggy-related protein
kinase kappa SP:Q39019 GI:717180 from [Arabidopsis
thaliana]
Length = 421
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 131 VTVVKKIGVPIPHPVAVSVPQYVKVPIPQ--PYPVH 232
V ++K +G P + P Y + PQ P+P H
Sbjct: 294 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWH 329
>At1g09840.1 68414.m01106 shaggy-related protein kinase kappa /
ASK-kappa (ASK10) identical to shaggy-related protein
kinase kappa SP:Q39019 GI:717180 from [Arabidopsis
thaliana]
Length = 421
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 131 VTVVKKIGVPIPHPVAVSVPQYVKVPIPQ--PYPVH 232
V ++K +G P + P Y + PQ P+P H
Sbjct: 294 VEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWH 329
>At5g38850.1 68418.m04699 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 986
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 256 QDRLLHCDVDRVGLRYGHLHVLRDR 182
Q+RLL +++ G+R HL +RDR
Sbjct: 254 QERLLSKIMNQKGMRIEHLGTIRDR 278
>At5g21070.1 68418.m02509 expressed protein
Length = 225
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +2
Query: 95 GHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKV 205
GHTH+ + + V + VP P A ++P ++ V
Sbjct: 106 GHTHSHNQPMEKMAVAGLVLVPALSPCATTLPVFLAV 142
>At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEMETER
protein [Arabidopsis thaliana] GI:21743571; contains Pfam
profile PF00730: HhH-GPD superfamily base excision DNA
repair protein
Length = 1729
Score = 25.0 bits (52), Expect = 6.8
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 227 PGRVEVWAPSRTAGPTQPPD 168
P + +W P TA QPP+
Sbjct: 1567 PYLLAIWTPGETANSAQPPE 1586
>At3g61260.1 68416.m06856 DNA-binding family protein / remorin
family protein similar to DNA-binding protein gi|601843
[Arabidopsis thaliana], remorin [Solanum tuberosum]
GI:1881585; contains Pfam profiles PF03763: Remorin
C-terminal region, PF03766: Remorin N-terminal region
Length = 212
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/31 (32%), Positives = 12/31 (38%)
Frame = +2
Query: 146 KIGVPIPHPVAVSVPQYVKVPIPQPYPVHVT 238
K+ P P P + P P P P VT
Sbjct: 16 KVTTPAPADTPAPAPAEIPAPAPAPTPADVT 46
>At3g52250.1 68416.m05742 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 1677
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 217 LRYGHLHVLRDRHSHRMGNRNSDLLHH 137
L++ H+ V + R SH + N NS+ LH+
Sbjct: 1063 LKFNHV-VKKPRISHTLHNENSNTLHN 1088
>At3g17700.1 68416.m02259 cyclic nucleotide-binding transporter 1 /
CNBT1 (CNGC20) identical to cyclic nucleotide-binding
transporter 1 (CNBT1) GI:8131898 from [Arabidopsis
thaliana]; member of the cyclic nucleotide-gated channel
(CNGC) family- see PMID:11500563
Length = 764
Score = 25.0 bits (52), Expect = 6.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 202 LHVLRDRHSHRMGNRNSDLLHHGHMVRLRVFCVR 101
L +R+R R +S +LH G +V VF VR
Sbjct: 602 LDAIRERLKQRTYIGSSTVLHRGGLVEKMVFIVR 635
>At3g09430.1 68416.m01120 hypothetical protein
Length = 247
Score = 25.0 bits (52), Expect = 6.8
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 164 PHPVAVSVPQYVKVPIPQPYP 226
P P+A+ P Y P P YP
Sbjct: 43 PKPLAIRYPNYNSPPTPVSYP 63
>At2g38440.1 68415.m04721 expressed protein
Length = 1399
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 112 THEAVPCDRG-EEDRSSDSPSGGCVGPAVREGAH 210
T + VPC G + S D+PS C GP+ +G H
Sbjct: 679 TGKLVPCSAGVGMEVSPDTPSKVC-GPSSADGIH 711
>At5g65165.1 68418.m08196 succinate dehydrogenase, iron-sulphur
subunit, mitochondrial (SDH2-3) nearly identical to
mitochondrial succinate dehydrogenase iron-sulphur
subunit (sdh2-3) [gi:12049602] from Arabidopsis thaliana
Length = 309
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Frame = -3
Query: 176 PPDGESELRSSSPRSH--GTASCVLCAC 99
P DG +S R G C+LCAC
Sbjct: 190 PKDGREHRQSPKDRKKLDGLYECILCAC 217
>At4g36730.2 68417.m05212 G-box binding factor 1 (GBF1) identical to
G-box binding factor 1 SP:P42774 from [Arabidopsis
thaliana]; contains Pfam profile: PF00170 bZIP
transcription factor
Length = 313
Score = 24.6 bits (51), Expect = 9.0
Identities = 16/70 (22%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +2
Query: 23 FKTTXXXXXXXXXXXRPSEEWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVK 202
FKTT P +W+ + + +G P PHP ++
Sbjct: 10 FKTTKPTSSAQEVPPTPYPDWQNSMQAYYGGGGTPNPFFPSPVGSPSPHPYMWGAQHHMM 69
Query: 203 VP--IPQPYP 226
P P PYP
Sbjct: 70 PPYGTPVPYP 79
>At4g36730.1 68417.m05211 G-box binding factor 1 (GBF1) identical to
G-box binding factor 1 SP:P42774 from [Arabidopsis
thaliana]; contains Pfam profile: PF00170 bZIP
transcription factor
Length = 315
Score = 24.6 bits (51), Expect = 9.0
Identities = 16/70 (22%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +2
Query: 23 FKTTXXXXXXXXXXXRPSEEWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVK 202
FKTT P +W+ + + +G P PHP ++
Sbjct: 10 FKTTKPTSSAQEVPPTPYPDWQNSMQAYYGGGGTPNPFFPSPVGSPSPHPYMWGAQHHMM 69
Query: 203 VP--IPQPYP 226
P P PYP
Sbjct: 70 PPYGTPVPYP 79
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 158 PIPHPVAVSVPQYVKVPIPQPY 223
P P P S P YV P P PY
Sbjct: 411 PSPPPPPPSPPPYVYPPPPPPY 432
>At3g18050.1 68416.m02296 expressed protein
Length = 335
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 137 RSHGTASCVLCACGLRAPILQKAERWRALLREGRLL 30
R + T V C CG+R L +E +R + EGRL+
Sbjct: 150 RPNETCDVVYCYCGIRLHPLSCSEAFR-VNDEGRLV 184
>At3g01670.1 68416.m00098 expressed protein
Length = 822
Score = 24.6 bits (51), Expect = 9.0
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +1
Query: 52 SARQRSAF*RMGARRPHAHRTHEAVPCDRGEEDRSSDSPS 171
SA QR A G RRP A R+HE P +D +P+
Sbjct: 27 SAEQRLAD-NAGERRPLAPRSHEDNPFGGHTDDHHVAAPA 65
>At2g32930.1 68415.m04037 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 453
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +2
Query: 104 HTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQPYPVHVT 238
H+ PY+ T + +P P+P A V +++ P P P +T
Sbjct: 332 HSMLLNPYNNTGLAMSSLPTPYPYAPPVSTNLRISSP-PSPSDMT 375
>At2g30480.2 68415.m03713 expressed protein
Length = 566
Score = 24.6 bits (51), Expect = 9.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 207 PYLNPTRSTSQWSNLSCP 260
P+LNP R +S W + P
Sbjct: 460 PFLNPERGSSHWRSSRAP 477
>At2g30480.1 68415.m03712 expressed protein
Length = 621
Score = 24.6 bits (51), Expect = 9.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 207 PYLNPTRSTSQWSNLSCP 260
P+LNP R +S W + P
Sbjct: 460 PFLNPERGSSHWRSSRAP 477
>At2g13820.1 68415.m01526 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein contains Pfam
protease inhibitor/seed storage/LTP family domain
PF00234
Length = 169
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +1
Query: 163 SPSGGCVGPAVREGAHTST-LPGPRHSGAT 249
SP+ G PA+ GA+ +T + PR S A+
Sbjct: 121 SPTAGAGAPALSSGANAATPVSSPRSSDAS 150
>At1g77970.1 68414.m09086 hydroxyproline-rich glycoprotein family
protein
Length = 76
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = +2
Query: 164 PHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250
P P S P+ P P P P + +P
Sbjct: 30 PEPAPTSKPKSTSTPTPIPEPAPTPIPEP 58
>At1g52030.2 68414.m05870 myrosinase-binding protein, putative
(F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
protein-like f-AtMBP [Arabidopsis thaliana]; similar to
myrosinase binding protein GI:1711295 from [Brassica
napus]; contains Pfam PF01419: Jacalin-like lectin
domain; identical to cDNA myrosinase-binding
protein-like protein (MBP1.2) GI:6760446
Length = 642
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/32 (31%), Positives = 11/32 (34%)
Frame = +2
Query: 155 VPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250
+P P P P P P P P V P
Sbjct: 292 LPAPTPAPAPAPAPAPAPAPSPAPASAPVPAP 323
>At1g52030.1 68414.m05869 myrosinase-binding protein, putative
(F-ATMBP) identical to SP|Q9SAV1 Myrosinase binding
protein-like f-AtMBP [Arabidopsis thaliana]; similar to
myrosinase binding protein GI:1711295 from [Brassica
napus]; contains Pfam PF01419: Jacalin-like lectin
domain; identical to cDNA myrosinase-binding
protein-like protein (MBP1.2) GI:6760446
Length = 642
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/32 (31%), Positives = 11/32 (34%)
Frame = +2
Query: 155 VPIPHPVAVSVPQYVKVPIPQPYPVHVTVEQP 250
+P P P P P P P P V P
Sbjct: 292 LPAPTPAPAPAPAPAPAPAPSPAPASAPVPAP 323
>At1g50610.1 68414.m05685 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor-like protein kinase
GB:AAC12254 GI:3015488 from [Lycopersicon esculentum]
Length = 686
Score = 24.6 bits (51), Expect = 9.0
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -2
Query: 162 IGTPIFFTTVTWYGFVCSVCVW 97
+ +P T W+G +CS VW
Sbjct: 70 LSSPCQGNTANWFGVLCSNYVW 91
>At1g16720.1 68414.m02005 expressed protein
Length = 598
Score = 24.6 bits (51), Expect = 9.0
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 71 PSEEWEPEGHTHTEHTKPYHVTVVKKIGVPIPHPVAVSVPQYVKVPIPQP 220
PS++ + + T TK TV KK+ V P P + P +K+ P
Sbjct: 57 PSDKKKTKTRPGTITTKESEETVAKKLDVAPPSPQSPPSPPTLKLDDVNP 106
>At1g15460.1 68414.m01858 anion exchange family protein member of
the PF|00955 Anion exchanger family
Length = 683
Score = 24.6 bits (51), Expect = 9.0
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -2
Query: 177 ATGWGIGTPIFFTTVTWYGFVCSVCVWPSGSHSSEGRALASATKRR 40
A W GT + + + YG V VW + S S+ + L S RR
Sbjct: 226 ARSWRYGTGWYRSFIADYGVPLMVVVWTALSFSTPSK-LPSGVPRR 270
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,681,425
Number of Sequences: 28952
Number of extensions: 146627
Number of successful extensions: 679
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 12,070,560
effective HSP length: 68
effective length of database: 10,101,824
effective search space used: 212138304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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