Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0881
         (454 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q59K17 Cluster: Putative uncharacterized protein; n=1; ...    36   0.41 
UniRef50_A0BIE3 Cluster: Chromosome undetermined scaffold_11, wh...    33   2.9  
UniRef50_A7RH04 Cluster: Predicted protein; n=1; Nematostella ve...    33   3.8  
UniRef50_Q5DUQ6 Cluster: Putative uncharacterized protein; n=1; ...    32   5.0  
UniRef50_Q559I7 Cluster: Putative uncharacterized protein; n=2; ...    32   5.0  
UniRef50_Q5JJM4 Cluster: Peptidylprolyl cis-trans isomerase-like...    32   6.6  
UniRef50_A7Q4N6 Cluster: Chromosome chr10 scaffold_50, whole gen...    32   6.6  
UniRef50_Q6U1Z7 Cluster: Basic pentacysteine 1; n=14; core eudic...    31   8.7  
UniRef50_Q4H395 Cluster: Transcription factor protein; n=1; Cion...    31   8.7  
UniRef50_Q5KHT4 Cluster: Putative uncharacterized protein; n=1; ...    31   8.7  

>UniRef50_Q59K17 Cluster: Putative uncharacterized protein; n=1;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 254

 Score = 35.9 bits (79), Expect = 0.41
 Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = +1

Query: 22  FWNSFSFHVYSCFPCFVSLWSSCLVYFFVLMRIFHLL--ASPEEI 150
           F +S SF   +C  CFVS  SSC V+ F L++IF+ L  AS  E+
Sbjct: 178 FLSSISFSSSAC--CFVSFSSSCSVFSFSLIKIFNFLFAASKSEV 220


>UniRef50_A0BIE3 Cluster: Chromosome undetermined scaffold_11, whole
           genome shotgun sequence; n=5; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_11,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 594

 Score = 33.1 bits (72), Expect = 2.9
 Identities = 15/35 (42%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
 Frame = -3

Query: 452 EKKKRVDDEKSDKKITQK-IRAIKDYQRSKRKNQR 351
           EK+K+ +D+K  K   QK I+ IK+YQ+SK++ ++
Sbjct: 353 EKEKKKEDKKKKKSRFQKQIQLIKNYQKSKKRKKK 387


>UniRef50_A7RH04 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 500

 Score = 32.7 bits (71), Expect = 3.8
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
 Frame = +1

Query: 1   YRSGICYFWNSFSFHVYS---CFPCFVSLWSS-CLVYFFVLMRIFHLLASPEEIYRWG 162
           Y++GI Y WN +SF+ ++        +  WS+ C    F    +   L  PE+I R G
Sbjct: 366 YKTGILYRWNKYSFYAWAWNIVGLLAIMAWSAGCAALMFGFCHLIGKLRVPEDIERKG 423


>UniRef50_Q5DUQ6 Cluster: Putative uncharacterized protein; n=1;
           Bacillus mycoides|Rep: Putative uncharacterized protein
           - Bacillus mycoides
          Length = 204

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 13  ICYFWNSFSFHVYSCFPCFVSLWSSCLVYFFVLMRIFHLL 132
           IC+  N     +Y  F C ++LW+   VYF VL+ I + L
Sbjct: 106 ICFVVNFIFGSIYGFFACTIALWTE-KVYFIVLIPIIYYL 144


>UniRef50_Q559I7 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 1493

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 434 DDEKSDKKITQKIRAIKDYQRSKRKNQRTVITPIG 330
           DD   D   T  +  I + ++S  KN+ T+ITP+G
Sbjct: 761 DDNDGDDDTTMMMTNINNEKKSSNKNKNTIITPLG 795


>UniRef50_Q5JJM4 Cluster: Peptidylprolyl cis-trans isomerase-like
           protein; n=3; Eukaryota|Rep: Peptidylprolyl cis-trans
           isomerase-like protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 698

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 21/65 (32%), Positives = 36/65 (55%)
 Frame = -1

Query: 262 RRTNRHSNKNNIT*YISVRLRNLCGTRDSPRTSTPNDKSLLVTPKDERSASKQKNKPGRS 83
           RR +RH + +     +S R R L   RDSPR  +P+ +    +P+ + S S++++ P R 
Sbjct: 364 RREHRHGDGSPRRRSVSPRRRALPKRRDSPRRDSPSRRR--DSPRRD-SPSRRRDSPRRD 420

Query: 82  STERQ 68
           S  R+
Sbjct: 421 SPSRR 425


>UniRef50_A7Q4N6 Cluster: Chromosome chr10 scaffold_50, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr10 scaffold_50, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 964

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 16  CYFWNSFSFHVYSCFPCFVSLWSSCLVYFFVL 111
           CY+ + F    ++  P  + LW  CL++FFVL
Sbjct: 141 CYWISVFGSFCFALLPFKLLLWHPCLLFFFVL 172


>UniRef50_Q6U1Z7 Cluster: Basic pentacysteine 1; n=14; core
           eudicotyledons|Rep: Basic pentacysteine 1 - Arabidopsis
           thaliana (Mouse-ear cress)
          Length = 283

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 136 SPEEIYRWGC*FWESLWCRIDFGV 207
           +P++ YRWGC  W+S  C  +  V
Sbjct: 200 TPQQCYRWGCGGWQSACCTTNISV 223


>UniRef50_Q4H395 Cluster: Transcription factor protein; n=1; Ciona
           intestinalis|Rep: Transcription factor protein - Ciona
           intestinalis (Transparent sea squirt)
          Length = 372

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = +1

Query: 169 FWESLWCRIDFGV*RICIR*YYFYWSDGSFFSTII 273
           FW++L+C +D+    +    YY+Y  +G F+ +++
Sbjct: 157 FWDNLYCWVDYPRQSMWTSVYYYYMLEGGFYFSLL 191


>UniRef50_Q5KHT4 Cluster: Putative uncharacterized protein; n=1;
           Filobasidiella neoformans|Rep: Putative uncharacterized
           protein - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 747

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 12/33 (36%), Positives = 23/33 (69%)
 Frame = -3

Query: 452 EKKKRVDDEKSDKKITQKIRAIKDYQRSKRKNQ 354
           EK  ++ DEK + K+T K+RA K+ +  +R+++
Sbjct: 232 EKGMQIQDEKDEGKMTVKLRAQKEQEEKRRQDE 264


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 357,963,035
Number of Sequences: 1657284
Number of extensions: 6010540
Number of successful extensions: 22465
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22297
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23511729640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)