Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0881
(454 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00036-15|AAK29857.1| 731|Caenorhabditis elegans Hypothetical p... 33 0.13
AF143149-1|AAD37915.1| 260|Caenorhabditis elegans R151.8B prote... 33 0.13
Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical p... 30 0.91
Z82268-10|CAB05202.1| 972|Caenorhabditis elegans Hypothetical p... 30 0.91
AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical ... 30 0.91
AL021476-1|CAA16317.1| 972|Caenorhabditis elegans Hypothetical ... 30 0.91
AC006777-6|AAK72307.1| 517|Caenorhabditis elegans Hypothetical ... 30 0.91
AF040645-13|AAB94983.1| 148|Caenorhabditis elegans Hypothetical... 29 1.2
AC024744-1|AAL00859.1| 685|Caenorhabditis elegans Hypothetical ... 28 2.8
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 28 3.7
U41546-5|AAC48222.2| 1022|Caenorhabditis elegans Sodium:neurotra... 28 3.7
U21323-11|AAA62556.1| 292|Caenorhabditis elegans Hypothetical p... 28 3.7
U21323-8|AAA62552.1| 294|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 27 4.8
U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin fam... 27 4.8
U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin fam... 27 4.8
U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin iso... 27 4.8
U28732-6|AAB04903.2| 489|Caenorhabditis elegans Hypothetical pr... 27 4.8
U28732-5|AAT92075.1| 495|Caenorhabditis elegans Hypothetical pr... 27 4.8
AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical ... 27 4.8
AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein. 27 6.4
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 27 6.4
AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated... 27 6.4
AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated... 27 6.4
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 27 6.4
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 27 6.4
AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical ... 27 6.4
AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical ... 27 8.4
AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical... 27 8.4
>U00036-15|AAK29857.1| 731|Caenorhabditis elegans Hypothetical
protein R151.8 protein.
Length = 731
Score = 32.7 bits (71), Expect = 0.13
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -1
Query: 262 RRTNRHSNKNNIT*YISVRLRNLCGTRDSPRTST--PNDKSLLVTPKDERSASKQ 104
RRT+ +S K ++ + ++ L T DSP TST P D S +V +RSA +
Sbjct: 556 RRTSTYSEKKSLLLSNAHKISELTATSDSPSTSTQGPTDFSSVVFSPTKRSADPE 610
>AF143149-1|AAD37915.1| 260|Caenorhabditis elegans R151.8B protein
protein.
Length = 260
Score = 32.7 bits (71), Expect = 0.13
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -1
Query: 262 RRTNRHSNKNNIT*YISVRLRNLCGTRDSPRTST--PNDKSLLVTPKDERSASKQ 104
RRT+ +S K ++ + ++ L T DSP TST P D S +V +RSA +
Sbjct: 85 RRTSTYSEKKSLLLSNAHKISELTATSDSPSTSTQGPTDFSSVVFSPTKRSADPE 139
>Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 29.9 bits (64), Expect = 0.91
Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = +1
Query: 1 YRSGICYF--WNSFSFHVYSCFPCFVSLWSSCLVYFFVLMRIFHLLASPEEIYRWG 162
+R G Y+ W S + F F+ W S LV FF IF L + WG
Sbjct: 654 FRPGFTYYNMWISLVGALLCVFVMFIIDWFSALVTFFCFGAIFMYLLHRKPDVNWG 709
>Z82268-10|CAB05202.1| 972|Caenorhabditis elegans Hypothetical
protein Y37A1C.1a protein.
Length = 972
Score = 29.9 bits (64), Expect = 0.91
Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = +1
Query: 1 YRSGICYF--WNSFSFHVYSCFPCFVSLWSSCLVYFFVLMRIFHLLASPEEIYRWG 162
+R G Y+ W S + F F+ W S LV FF IF L + WG
Sbjct: 654 FRPGFTYYNMWISLVGALLCVFVMFIIDWFSALVTFFCFGAIFMYLLHRKPDVNWG 709
>AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 29.9 bits (64), Expect = 0.91
Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = +1
Query: 1 YRSGICYF--WNSFSFHVYSCFPCFVSLWSSCLVYFFVLMRIFHLLASPEEIYRWG 162
+R G Y+ W S + F F+ W S LV FF IF L + WG
Sbjct: 654 FRPGFTYYNMWISLVGALLCVFVMFIIDWFSALVTFFCFGAIFMYLLHRKPDVNWG 709
>AL021476-1|CAA16317.1| 972|Caenorhabditis elegans Hypothetical
protein Y37A1C.1a protein.
Length = 972
Score = 29.9 bits (64), Expect = 0.91
Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Frame = +1
Query: 1 YRSGICYF--WNSFSFHVYSCFPCFVSLWSSCLVYFFVLMRIFHLLASPEEIYRWG 162
+R G Y+ W S + F F+ W S LV FF IF L + WG
Sbjct: 654 FRPGFTYYNMWISLVGALLCVFVMFIIDWFSALVTFFCFGAIFMYLLHRKPDVNWG 709
>AC006777-6|AAK72307.1| 517|Caenorhabditis elegans Hypothetical
protein Y46H3D.4 protein.
Length = 517
Score = 29.9 bits (64), Expect = 0.91
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 350 FSGSFFLIFGNPLLLVSFVLSFYQIFHHRLAFFSR 454
F +FF++F N +L+ F+L + IF+ +F R
Sbjct: 476 FRLNFFILFSNNSILIFFILKVFVIFYSEHSFLVR 510
>AF040645-13|AAB94983.1| 148|Caenorhabditis elegans Hypothetical
protein F52C6.13 protein.
Length = 148
Score = 29.5 bits (63), Expect = 1.2
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +1
Query: 28 NSFSFHVYSCFPCFVSLWSSCLVYFFVLMRIFHLLASPEEIYRW 159
N +S +SCFP F+S +S +V+FF L + ++ PE+++ +
Sbjct: 35 NCYSTINFSCFPFFISRFSE-IVFFFPLSDL--KVSFPEDVHNF 75
>AC024744-1|AAL00859.1| 685|Caenorhabditis elegans Hypothetical
protein Y108G3AL.3 protein.
Length = 685
Score = 28.3 bits (60), Expect = 2.8
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 202 RNLCGTRDSPRTSTPNDKSLLVTPKDERSASKQKNKPGRSST 77
R G PR TPN K+ P RS S KN P R+ +
Sbjct: 501 RKAAGGSHEPRAKTPNQKNKDERPTTRRS-SVDKNAPKRNDS 541
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = -3
Query: 452 EKKKRVDDEKSDKKITQKIRAIKDYQRSKRKNQR 351
EKK+ D+K D+K +K A K+ ++ ++K ++
Sbjct: 228 EKKEEKKDDKKDEKKDEKKEAKKEEKKEEKKEEK 261
>U41546-5|AAC48222.2| 1022|Caenorhabditis elegans
Sodium:neurotransmitter symporterfamily protein 12
protein.
Length = 1022
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 17 VTFGIPSLFMSTLAFPALSLCGAPAWFIFLF*CGSFIFWRHQ 142
VT +P L +S L +SL GA FLF S W+ Q
Sbjct: 366 VTATVPYLLLSILLLRGISLPGANKGLTFLFTVDSTKLWKWQ 407
>U21323-11|AAA62556.1| 292|Caenorhabditis elegans Hypothetical
protein C45G9.4 protein.
Length = 292
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -1
Query: 169 TSTPNDKSLLVTPKDERSAS-KQKNKPGRSS 80
T+ DK LV+PK ++ S K K KP RSS
Sbjct: 3 TAITPDKKKLVSPKPTKTTSDKSKTKPRRSS 33
>U21323-8|AAA62552.1| 294|Caenorhabditis elegans Hypothetical
protein C45G9.9 protein.
Length = 294
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -1
Query: 169 TSTPNDKSLLVTPKDERSAS-KQKNKPGRSS 80
T+ DK LV+PK ++ S K K KP RSS
Sbjct: 3 TAITPDKKKLVSPKPTKTTSDKSKTKPRRSS 33
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 27.5 bits (58), Expect = 4.8
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -1
Query: 178 SPRTSTPNDKSL-LVTPKDERSASKQKNKPGRSSTER 71
S R +P+ + L LV KD++++++ P RSST +
Sbjct: 615 SSRAGSPSKQILQLVESKDDQTSTENSESPSRSSTPK 651
>Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical
protein Y53C12B.3a protein.
Length = 867
Score = 27.5 bits (58), Expect = 4.8
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -1
Query: 178 SPRTSTPNDKSL-LVTPKDERSASKQKNKPGRSSTER 71
S R +P+ + L LV KD++++++ P RSST +
Sbjct: 612 SSRAGSPSKQILQLVESKDDQTSTENSESPSRSSTPK 648
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = -3
Query: 452 EKKKRVDDEKSDKKITQKIRAIKDYQRSKRKNQRTVI 342
+KKK +++EK K +K R ++ +R K+ N+ T +
Sbjct: 601 KKKKALEEEKKRKIAEEKARQKQEKERKKQANKCTFL 637
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -1
Query: 187 TRDSPRTSTPNDKSLLVTPKDERSASKQKNKPGRSSTERQ 68
TRD R+ +P +S +P RS ++ PG ++R+
Sbjct: 185 TRDRSRSRSPRRRSRSRSPTRSRSPPARRRSPGSDRSDRK 224
>U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin family
protein 8, isoformb protein.
Length = 447
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -1
Query: 184 RDSPRTSTPNDKSLLVTPKDERSASKQKNKPGRSST 77
R S R+ + ND+S L PK+ RSAS +K SS+
Sbjct: 403 RRSSRSGSENDESELEEPKN-RSASPRKRSSSSSSS 437
>U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin family
protein 8, isoforma protein.
Length = 466
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -1
Query: 184 RDSPRTSTPNDKSLLVTPKDERSASKQKNKPGRSST 77
R S R+ + ND+S L PK+ RSAS +K SS+
Sbjct: 422 RRSSRSGSENDESELEEPKN-RSASPRKRSSSSSSS 456
>U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin
isoform 8 protein.
Length = 466
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -1
Query: 184 RDSPRTSTPNDKSLLVTPKDERSASKQKNKPGRSST 77
R S R+ + ND+S L PK+ RSAS +K SS+
Sbjct: 422 RRSSRSGSENDESELEEPKN-RSASPRKRSSSSSSS 456
>U28732-6|AAB04903.2| 489|Caenorhabditis elegans Hypothetical
protein F45E1.7a protein.
Length = 489
Score = 27.5 bits (58), Expect = 4.8
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = -1
Query: 184 RDSPRTSTPNDKSLLVTPKDERSASKQKNKPGRSSTERQ 68
+ SP++S+ +D S + K +A+K KN+P +++T+ Q
Sbjct: 356 KSSPKSSSESDTSTFDSRKHNSTANKYKNQP-QNTTQIQ 393
>U28732-5|AAT92075.1| 495|Caenorhabditis elegans Hypothetical
protein F45E1.7b protein.
Length = 495
Score = 27.5 bits (58), Expect = 4.8
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = -1
Query: 184 RDSPRTSTPNDKSLLVTPKDERSASKQKNKPGRSSTERQ 68
+ SP++S+ +D S + K +A+K KN+P +++T+ Q
Sbjct: 362 KSSPKSSSESDTSTFDSRKHNSTANKYKNQP-QNTTQIQ 399
>AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical
protein F20H11.4 protein.
Length = 446
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -3
Query: 452 EKKKRVDDEKS--DKKITQKIRAIKDYQRSKRKNQRTVITP 336
EK K DD K DKK +K KD + K KN+++ + P
Sbjct: 54 EKSKVPDDGKKQEDKKEVKKEEKKKDEKNKKSKNRKSKMKP 94
>AY714779-1|AAU14146.1| 1338|Caenorhabditis elegans UNC-89 protein.
Length = 1338
Score = 27.1 bits (57), Expect = 6.4
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Frame = -1
Query: 199 NLCGTRDSPRTSTPNDKS-LLVTPKDERS----ASKQKNKPG 89
NL SPR STP KS ++++P+ E S + ++ KPG
Sbjct: 635 NLSPNPKSPRRSTPGTKSPVVLSPRQEHSMEVLIATKRGKPG 676
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = -3
Query: 452 EKKKRVDDEKSDKKITQKIRAIKDYQRSKRKNQR 351
EKK+ +D+K +KK +K KD ++ ++K+++
Sbjct: 92 EKKEEKEDKKEEKKEEKKEDDKKDEKKDEKKDEK 125
Score = 26.6 bits (56), Expect = 8.4
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = -3
Query: 452 EKKKRVDDEKSDKKITQKIRAIKDYQRSKRKNQR 351
EKK+ +EK DKK +K +D ++ ++K+++
Sbjct: 88 EKKEEKKEEKEDKKEEKKEEKKEDDKKDEKKDEK 121
>AF003131-8|AAP68959.1| 1393|Caenorhabditis elegans Uncoordinated
protein 89, isoform c protein.
Length = 1393
Score = 27.1 bits (57), Expect = 6.4
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Frame = -1
Query: 199 NLCGTRDSPRTSTPNDKS-LLVTPKDERS----ASKQKNKPG 89
NL SPR STP KS ++++P+ E S + ++ KPG
Sbjct: 599 NLSPNPKSPRRSTPGTKSPVVLSPRQEHSMEVLIATKRGKPG 640
>AF003131-7|AAV34798.1| 1396|Caenorhabditis elegans Uncoordinated
protein 89, isoform d protein.
Length = 1396
Score = 27.1 bits (57), Expect = 6.4
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Frame = -1
Query: 199 NLCGTRDSPRTSTPNDKS-LLVTPKDERS----ASKQKNKPG 89
NL SPR STP KS ++++P+ E S + ++ KPG
Sbjct: 602 NLSPNPKSPRRSTPGTKSPVVLSPRQEHSMEVLIATKRGKPG 643
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.1 bits (57), Expect = 6.4
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Frame = -1
Query: 199 NLCGTRDSPRTSTPNDKS-LLVTPKDERS----ASKQKNKPG 89
NL SPR STP KS ++++P+ E S + ++ KPG
Sbjct: 6647 NLSPNPKSPRRSTPGTKSPVVLSPRQEHSMEVLIATKRGKPG 6688
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.1 bits (57), Expect = 6.4
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Frame = -1
Query: 199 NLCGTRDSPRTSTPNDKS-LLVTPKDERS----ASKQKNKPG 89
NL SPR STP KS ++++P+ E S + ++ KPG
Sbjct: 7287 NLSPNPKSPRRSTPGTKSPVVLSPRQEHSMEVLIATKRGKPG 7328
>AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical
protein F49H12.5 protein.
Length = 257
Score = 27.1 bits (57), Expect = 6.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -3
Query: 452 EKKKRVDDEKSDKKITQKIRAIKDYQRSKRKNQR 351
EKK +EK DKK +K K+ + K+K+++
Sbjct: 183 EKKVEKKEEKKDKKKDEKKEEKKEKKEDKKKDEK 216
>AL117199-4|CAN99722.1| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 26.6 bits (56), Expect = 8.4
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -1
Query: 202 RNLCGTRDSPRTSTPNDKSLLVTP-KDERSASKQKN-KPGRSSTERQ 68
R C + N+K+ P + +++ SK KN KPG SST++Q
Sbjct: 1053 RTSCPSSKKRPKLAENEKNAASPPTRHQQNGSKDKNEKPGCSSTKKQ 1099
>AL117195-32|CAB60770.3| 1342|Caenorhabditis elegans Hypothetical
protein Y57A10A.1 protein.
Length = 1342
Score = 26.6 bits (56), Expect = 8.4
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -1
Query: 202 RNLCGTRDSPRTSTPNDKSLLVTP-KDERSASKQKN-KPGRSSTERQ 68
R C + N+K+ P + +++ SK KN KPG SST++Q
Sbjct: 1053 RTSCPSSKKRPKLAENEKNAASPPTRHQQNGSKDKNEKPGCSSTKKQ 1099
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,384,690
Number of Sequences: 27780
Number of extensions: 151405
Number of successful extensions: 747
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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