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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0881
         (454 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   1.2  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   4.7  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   4.7  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   4.7  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   4.7  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   4.7  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   4.7  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   4.7  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   4.7  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   8.3  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   8.3  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   8.3  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = +1

Query: 13  ICYFWNSFSFHVYSCFPCFVSLW 81
           ICY   ++  +  +   CF+++W
Sbjct: 658 ICYLGKAYLMYAIAGSQCFINIW 680



 Score = 21.8 bits (44), Expect = 3.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 44  MSTLAFPALSLCGAPAW 94
           +S L  P + +C AP W
Sbjct: 537 LSLLGGPLVMVCSAPVW 553


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -1

Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341
           R++ E M++   +R H+R ++  I + +  R RE+ L
Sbjct: 37  RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -1

Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341
           R++ E M++   +R H+R ++  I + +  R RE+ L
Sbjct: 37  RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -1

Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341
           R++ E M++   +R H+R ++  I + +  R RE+ L
Sbjct: 37  RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -1

Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341
           R++ E M++   +R H+R ++  I + +  R RE+ L
Sbjct: 37  RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -1

Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341
           R++ E M++   +R H+R ++  I + +  R RE+ L
Sbjct: 37  RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -1

Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341
           R++ E M++   +R H+R ++  I + +  R RE+ L
Sbjct: 37  RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -1

Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341
           R++ E M++   +R H+R ++  I + +  R RE+ L
Sbjct: 37  RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = -1

Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341
           R++ E M++   +R H+R ++  I + +  R RE+ L
Sbjct: 37  RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +1

Query: 64  CFVSLWSSCLVYFFVLMRIFHLLAS 138
           C +S W++      +   +F+LL S
Sbjct: 105 CVLSCWTNIYYIIILAWALFYLLVS 129


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +1

Query: 64  CFVSLWSSCLVYFFVLMRIFHLLAS 138
           C +S W++      +   +F+LL S
Sbjct: 158 CVLSCWTNIYYIIILAWALFYLLVS 182


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = +3

Query: 252 FVLLNYYLFTF 284
           F+L+NY++F +
Sbjct: 16  FILINYFIFLY 26


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,968
Number of Sequences: 438
Number of extensions: 1978
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)

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