BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0881 (454 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 1.2 AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 4.7 AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 4.7 AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 4.7 AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 4.7 AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 4.7 AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 4.7 AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 4.7 AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 4.7 AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 8.3 AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 8.3 AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 21 8.3 >AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera ORF for hypotheticalprotein. ). Length = 998 Score = 23.4 bits (48), Expect = 1.2 Identities = 6/23 (26%), Positives = 13/23 (56%) Frame = +1 Query: 13 ICYFWNSFSFHVYSCFPCFVSLW 81 ICY ++ + + CF+++W Sbjct: 658 ICYLGKAYLMYAIAGSQCFINIW 680 Score = 21.8 bits (44), Expect = 3.6 Identities = 7/17 (41%), Positives = 10/17 (58%) Frame = +2 Query: 44 MSTLAFPALSLCGAPAW 94 +S L P + +C AP W Sbjct: 537 LSLLGGPLVMVCSAPVW 553 >AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 21.4 bits (43), Expect = 4.7 Identities = 11/37 (29%), Positives = 22/37 (59%) Frame = -1 Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341 R++ E M++ +R H+R ++ I + + R RE+ L Sbjct: 37 RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73 >AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 21.4 bits (43), Expect = 4.7 Identities = 11/37 (29%), Positives = 22/37 (59%) Frame = -1 Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341 R++ E M++ +R H+R ++ I + + R RE+ L Sbjct: 37 RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73 >AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 21.4 bits (43), Expect = 4.7 Identities = 11/37 (29%), Positives = 22/37 (59%) Frame = -1 Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341 R++ E M++ +R H+R ++ I + + R RE+ L Sbjct: 37 RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73 >AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 21.4 bits (43), Expect = 4.7 Identities = 11/37 (29%), Positives = 22/37 (59%) Frame = -1 Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341 R++ E M++ +R H+R ++ I + + R RE+ L Sbjct: 37 RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73 >AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 21.4 bits (43), Expect = 4.7 Identities = 11/37 (29%), Positives = 22/37 (59%) Frame = -1 Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341 R++ E M++ +R H+R ++ I + + R RE+ L Sbjct: 37 RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73 >AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 21.4 bits (43), Expect = 4.7 Identities = 11/37 (29%), Positives = 22/37 (59%) Frame = -1 Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341 R++ E M++ +R H+R ++ I + + R RE+ L Sbjct: 37 RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73 >AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. Length = 400 Score = 21.4 bits (43), Expect = 4.7 Identities = 11/37 (29%), Positives = 22/37 (59%) Frame = -1 Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341 R++ E M++ +R H+R ++ I + + R RE+ L Sbjct: 37 RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73 >AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex determiner protein. Length = 401 Score = 21.4 bits (43), Expect = 4.7 Identities = 11/37 (29%), Positives = 22/37 (59%) Frame = -1 Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341 R++ E M++ +R H+R ++ I + + R RE+ L Sbjct: 37 RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73 >AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter transporter-1B protein. Length = 593 Score = 20.6 bits (41), Expect = 8.3 Identities = 7/25 (28%), Positives = 13/25 (52%) Frame = +1 Query: 64 CFVSLWSSCLVYFFVLMRIFHLLAS 138 C +S W++ + +F+LL S Sbjct: 105 CVLSCWTNIYYIIILAWALFYLLVS 129 >AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter transporter-1B protein. Length = 646 Score = 20.6 bits (41), Expect = 8.3 Identities = 7/25 (28%), Positives = 13/25 (52%) Frame = +1 Query: 64 CFVSLWSSCLVYFFVLMRIFHLLAS 138 C +S W++ + +F+LL S Sbjct: 158 CVLSCWTNIYYIIILAWALFYLLVS 182 >AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase precursor protein. Length = 156 Score = 20.6 bits (41), Expect = 8.3 Identities = 5/11 (45%), Positives = 10/11 (90%) Frame = +3 Query: 252 FVLLNYYLFTF 284 F+L+NY++F + Sbjct: 16 FILINYFIFLY 26 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 100,968 Number of Sequences: 438 Number of extensions: 1978 Number of successful extensions: 15 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 15 length of database: 146,343 effective HSP length: 53 effective length of database: 123,129 effective search space used: 11943513 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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