Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0881
(454 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 1.2
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 4.7
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 4.7
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 4.7
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 4.7
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 4.7
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 4.7
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 4.7
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 4.7
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 8.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 8.3
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 21 8.3
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 23.4 bits (48), Expect = 1.2
Identities = 6/23 (26%), Positives = 13/23 (56%)
Frame = +1
Query: 13 ICYFWNSFSFHVYSCFPCFVSLW 81
ICY ++ + + CF+++W
Sbjct: 658 ICYLGKAYLMYAIAGSQCFINIW 680
Score = 21.8 bits (44), Expect = 3.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2
Query: 44 MSTLAFPALSLCGAPAW 94
+S L P + +C AP W
Sbjct: 537 LSLLGGPLVMVCSAPVW 553
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 4.7
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -1
Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341
R++ E M++ +R H+R ++ I + + R RE+ L
Sbjct: 37 RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 4.7
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -1
Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341
R++ E M++ +R H+R ++ I + + R RE+ L
Sbjct: 37 RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 4.7
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -1
Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341
R++ E M++ +R H+R ++ I + + R RE+ L
Sbjct: 37 RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 4.7
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -1
Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341
R++ E M++ +R H+R ++ I + + R RE+ L
Sbjct: 37 RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 4.7
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -1
Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341
R++ E M++ +R H+R ++ I + + R RE+ L
Sbjct: 37 RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 4.7
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -1
Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341
R++ E M++ +R H+R ++ I + + R RE+ L
Sbjct: 37 RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 4.7
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -1
Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341
R++ E M++ +R H+R ++ I + + R RE+ L
Sbjct: 37 RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 4.7
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -1
Query: 451 RKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLL 341
R++ E M++ +R H+R ++ I + + R RE+ L
Sbjct: 37 RRRREWMIQQEREREHERLKKKMILEYELRRAREKKL 73
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 20.6 bits (41), Expect = 8.3
Identities = 7/25 (28%), Positives = 13/25 (52%)
Frame = +1
Query: 64 CFVSLWSSCLVYFFVLMRIFHLLAS 138
C +S W++ + +F+LL S
Sbjct: 105 CVLSCWTNIYYIIILAWALFYLLVS 129
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 20.6 bits (41), Expect = 8.3
Identities = 7/25 (28%), Positives = 13/25 (52%)
Frame = +1
Query: 64 CFVSLWSSCLVYFFVLMRIFHLLAS 138
C +S W++ + +F+LL S
Sbjct: 158 CVLSCWTNIYYIIILAWALFYLLVS 182
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 20.6 bits (41), Expect = 8.3
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +3
Query: 252 FVLLNYYLFTF 284
F+L+NY++F +
Sbjct: 16 FILINYFIFLY 26
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,968
Number of Sequences: 438
Number of extensions: 1978
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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