BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0881 (454 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At2g01930.2 68415.m00128 expressed protein 31 0.28 At2g01930.1 68415.m00127 expressed protein 31 0.28 At4g20160.1 68417.m02949 expressed protein ; expression supporte... 30 0.64 At1g14685.3 68414.m01750 expressed protein 30 0.64 At1g14685.2 68414.m01749 expressed protein 30 0.64 At1g14685.1 68414.m01748 expressed protein 30 0.64 At5g49740.1 68418.m06159 ferric reductase-like transmembrane com... 30 0.84 At1g68120.1 68414.m07781 expressed protein 30 0.84 At2g39320.1 68415.m04827 OTU-like cysteine protease family prote... 29 1.1 At5g62640.1 68418.m07862 proline-rich family protein contains pr... 28 2.6 At1g52155.1 68414.m05886 expressed protein 28 3.4 At5g49730.1 68418.m06158 ferric reductase-like transmembrane com... 27 4.5 At1g65280.1 68414.m07402 DNAJ heat shock N-terminal domain-conta... 27 4.5 At1g05570.1 68414.m00575 callose synthase 1 (CALS1) / 1,3-beta-g... 27 4.5 At4g38250.1 68417.m05402 amino acid transporter family protein l... 27 5.9 At1g17480.1 68414.m02145 calmodulin-binding family protein low s... 27 5.9 At5g60530.1 68418.m07590 late embryogenesis abundant protein-rel... 27 7.8 At5g40010.1 68418.m04852 AAA-type ATPase family protein contains... 27 7.8 At5g04670.1 68418.m00475 expressed protein BRL protein, Homo sap... 27 7.8 >At2g01930.2 68415.m00128 expressed protein Length = 283 Score = 31.5 bits (68), Expect = 0.28 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +1 Query: 136 SPEEIYRWGC*FWESLWCRIDFGV 207 +P++ YRWGC W+S C + V Sbjct: 200 TPQQCYRWGCGGWQSACCTTNISV 223 >At2g01930.1 68415.m00127 expressed protein Length = 283 Score = 31.5 bits (68), Expect = 0.28 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +1 Query: 136 SPEEIYRWGC*FWESLWCRIDFGV 207 +P++ YRWGC W+S C + V Sbjct: 200 TPQQCYRWGCGGWQSACCTTNISV 223 >At4g20160.1 68417.m02949 expressed protein ; expression supported by MPSS Length = 1188 Score = 30.3 bits (65), Expect = 0.64 Identities = 27/128 (21%), Positives = 53/128 (41%), Gaps = 1/128 (0%) Frame = -1 Query: 454 SRKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLLLQ*AMMIQLSRSMSQAIQSKVK 275 S + SE+ I+R E+ ++ +E+ +ER LQ + R+ +++ Sbjct: 778 SLRNSEAKSTKEIERQEVTQEEKSVSHGSREKDKERNSLQYGEKMCFLRNSEAKSTKEIE 837 Query: 274 R**LRRTNRHSNKNNIT*YISVRLRNLCGTRDSPRTS-TPNDKSLLVTPKDERSASKQKN 98 R + ++ + S + +N D T PNDK + P+DE S ++ Sbjct: 838 RNKSQEVSQGEESASHGSRESAKEKNSSQQDDETSTHRNPNDKKGIKEPEDEESKKVERE 897 Query: 97 KPGRSSTE 74 + G + E Sbjct: 898 ETGENVEE 905 >At1g14685.3 68414.m01750 expressed protein Length = 279 Score = 30.3 bits (65), Expect = 0.64 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = +1 Query: 136 SPEEIYRWGC*FWESLWC 189 +P++ YRWGC W+S C Sbjct: 196 APQQCYRWGCGGWQSACC 213 >At1g14685.2 68414.m01749 expressed protein Length = 279 Score = 30.3 bits (65), Expect = 0.64 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = +1 Query: 136 SPEEIYRWGC*FWESLWC 189 +P++ YRWGC W+S C Sbjct: 196 APQQCYRWGCGGWQSACC 213 >At1g14685.1 68414.m01748 expressed protein Length = 279 Score = 30.3 bits (65), Expect = 0.64 Identities = 9/18 (50%), Positives = 13/18 (72%) Frame = +1 Query: 136 SPEEIYRWGC*FWESLWC 189 +P++ YRWGC W+S C Sbjct: 196 APQQCYRWGCGGWQSACC 213 >At5g49740.1 68418.m06159 ferric reductase-like transmembrane component family protein similar to ferric-chelate reductase (FRO1) [Pisum sativum] GI:15341529; contains Pfam profile PF01794: Ferric reductase like transmembrane componenent Length = 747 Score = 29.9 bits (64), Expect = 0.84 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +2 Query: 353 SGSFFLIFGNPLLLVSFVLSFYQIFHHRLAFFSR 454 +GS FLIF P+L+++ + S Y I F++ Sbjct: 77 TGSMFLIFSGPILVIAILASLYLIISGEETVFTK 110 >At1g68120.1 68414.m07781 expressed protein Length = 270 Score = 29.9 bits (64), Expect = 0.84 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +1 Query: 139 PEEIYRWGC*FWESLWC 189 P++ YRWGC W+S C Sbjct: 188 PQQCYRWGCGGWQSACC 204 >At2g39320.1 68415.m04827 OTU-like cysteine protease family protein contains Pfam profile PF02338: OTU-like cysteine protease Length = 189 Score = 29.5 bits (63), Expect = 1.1 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -3 Query: 452 EKKKRVDDEKSDKKITQKIRAIKDYQRSKRKNQR 351 EKKK +D+K DK+ +K + K+ + K K R Sbjct: 148 EKKKDKEDKKKDKEDKKKAKVQKEKKEKKEKKNR 181 >At5g62640.1 68418.m07862 proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 520 Score = 28.3 bits (60), Expect = 2.6 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -1 Query: 214 SVRLRNLCGTRDSPRTSTPNDKSLLVTPKDERSASKQKNKPGRSS 80 SVR+R T P+ T SL TP+ SA+ K +P ++S Sbjct: 449 SVRVRRESATVTKPKPKTSIASSLSFTPRAMASAATVKVEPAKTS 493 >At1g52155.1 68414.m05886 expressed protein Length = 235 Score = 27.9 bits (59), Expect = 3.4 Identities = 9/16 (56%), Positives = 15/16 (93%) Frame = +2 Query: 386 LLLVSFVLSFYQIFHH 433 LL++++++SFY IFHH Sbjct: 66 LLILNYMISFYVIFHH 81 >At5g49730.1 68418.m06158 ferric reductase-like transmembrane component family protein similar to ferric-chelate reductase (FRO1) [Pisum sativum] GI:15341529; contains Pfam profile PF01794: Ferric reductase like transmembrane componenent Length = 738 Score = 27.5 bits (58), Expect = 4.5 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +2 Query: 353 SGSFFLIFGNPLLLVSFVLSFYQI 424 +G+ FLIF P+L++S + S Y I Sbjct: 68 TGTMFLIFSCPILVISVLASLYLI 91 >At1g65280.1 68414.m07402 DNAJ heat shock N-terminal domain-containing protein contains Pfam profile PF00226 DnaJ domain Length = 598 Score = 27.5 bits (58), Expect = 4.5 Identities = 11/34 (32%), Positives = 22/34 (64%) Frame = -3 Query: 452 EKKKRVDDEKSDKKITQKIRAIKDYQRSKRKNQR 351 EK+++ + E+ KKI +K R +D ++ K+ +R Sbjct: 56 EKRRKREKERKRKKIERKERKRRDMKKKKKTKKR 89 >At1g05570.1 68414.m00575 callose synthase 1 (CALS1) / 1,3-beta-glucan synthase 1 nearly identical to callose synthase 1 catalytic subunit [Arabidopsis thaliana] GI:13649388 Length = 1922 Score = 27.5 bits (58), Expect = 4.5 Identities = 10/40 (25%), Positives = 22/40 (55%) Frame = +1 Query: 19 YFWNSFSFHVYSCFPCFVSLWSSCLVYFFVLMRIFHLLAS 138 Y W+ F H + ++LWS ++ +F+ +I++ + S Sbjct: 672 YSWHEFFPHAKNNLGVVIALWSPVILVYFMDTQIWYAIVS 711 >At4g38250.1 68417.m05402 amino acid transporter family protein low similarity to lysosomal amino acid transporter 1 [Rattus norvegicus] GI:14571904; contains Pfam profile PF01490: Transmembrane amino acid transporter protein Length = 436 Score = 27.1 bits (57), Expect = 5.9 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%) Frame = +1 Query: 58 FPCFVSLW--SSCLVYFFVLMRIFHLLASPEEI 150 F F+SL S+C V FVL +FHLL EE+ Sbjct: 369 FADFLSLVGSSTCCVLGFVLPALFHLLVFKEEM 401 >At1g17480.1 68414.m02145 calmodulin-binding family protein low similarity to SF16 protein [Helianthus annuus] GI:560150; contains Pfam profile PF00612: IQ calmodulin-binding motif Length = 371 Score = 27.1 bits (57), Expect = 5.9 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = -2 Query: 129 KMKDPHQNKKINQAGAPQRDKAGKARVDMKREGIPK 22 ++KDP + + G+P+ K K ++ MK+EG K Sbjct: 164 ELKDPVKQTEKGWCGSPRSIKEVKTKLQMKQEGAIK 199 >At5g60530.1 68418.m07590 late embryogenesis abundant protein-related / LEA protein-related similar to late embryogenesis abundant protein [Picea glauca] GI:1350543 Length = 439 Score = 26.6 bits (56), Expect = 7.8 Identities = 11/33 (33%), Positives = 22/33 (66%) Frame = -3 Query: 452 EKKKRVDDEKSDKKITQKIRAIKDYQRSKRKNQ 354 EKK +++ EK DK+ +K R K+ + ++K++ Sbjct: 97 EKKDKLEKEKKDKERKEKERKEKERKAKEKKDK 129 >At5g40010.1 68418.m04852 AAA-type ATPase family protein contains Pfam profile: ATPase family PF00004 Length = 514 Score = 26.6 bits (56), Expect = 7.8 Identities = 10/34 (29%), Positives = 22/34 (64%) Frame = -3 Query: 452 EKKKRVDDEKSDKKITQKIRAIKDYQRSKRKNQR 351 E K+R++DE+ KK ++I+ K ++ +K ++ Sbjct: 469 EAKRRIEDEEKKKKEEEEIKRKKREEKKIKKEEK 502 >At5g04670.1 68418.m00475 expressed protein BRL protein, Homo sapiens, EMBL:AF005067 Length = 766 Score = 26.6 bits (56), Expect = 7.8 Identities = 10/33 (30%), Positives = 22/33 (66%) Frame = -3 Query: 449 KKKRVDDEKSDKKITQKIRAIKDYQRSKRKNQR 351 K+KR+ + S + + +R++K Y+R ++ +QR Sbjct: 122 KRKRLCEPSSSDRSEEPLRSLKFYRRRRKLSQR 154 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,785,808 Number of Sequences: 28952 Number of extensions: 136338 Number of successful extensions: 554 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 534 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 553 length of database: 12,070,560 effective HSP length: 75 effective length of database: 9,899,160 effective search space used: 742437000 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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