Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0881
(454 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g01930.2 68415.m00128 expressed protein 31 0.28
At2g01930.1 68415.m00127 expressed protein 31 0.28
At4g20160.1 68417.m02949 expressed protein ; expression supporte... 30 0.64
At1g14685.3 68414.m01750 expressed protein 30 0.64
At1g14685.2 68414.m01749 expressed protein 30 0.64
At1g14685.1 68414.m01748 expressed protein 30 0.64
At5g49740.1 68418.m06159 ferric reductase-like transmembrane com... 30 0.84
At1g68120.1 68414.m07781 expressed protein 30 0.84
At2g39320.1 68415.m04827 OTU-like cysteine protease family prote... 29 1.1
At5g62640.1 68418.m07862 proline-rich family protein contains pr... 28 2.6
At1g52155.1 68414.m05886 expressed protein 28 3.4
At5g49730.1 68418.m06158 ferric reductase-like transmembrane com... 27 4.5
At1g65280.1 68414.m07402 DNAJ heat shock N-terminal domain-conta... 27 4.5
At1g05570.1 68414.m00575 callose synthase 1 (CALS1) / 1,3-beta-g... 27 4.5
At4g38250.1 68417.m05402 amino acid transporter family protein l... 27 5.9
At1g17480.1 68414.m02145 calmodulin-binding family protein low s... 27 5.9
At5g60530.1 68418.m07590 late embryogenesis abundant protein-rel... 27 7.8
At5g40010.1 68418.m04852 AAA-type ATPase family protein contains... 27 7.8
At5g04670.1 68418.m00475 expressed protein BRL protein, Homo sap... 27 7.8
>At2g01930.2 68415.m00128 expressed protein
Length = 283
Score = 31.5 bits (68), Expect = 0.28
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 136 SPEEIYRWGC*FWESLWCRIDFGV 207
+P++ YRWGC W+S C + V
Sbjct: 200 TPQQCYRWGCGGWQSACCTTNISV 223
>At2g01930.1 68415.m00127 expressed protein
Length = 283
Score = 31.5 bits (68), Expect = 0.28
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 136 SPEEIYRWGC*FWESLWCRIDFGV 207
+P++ YRWGC W+S C + V
Sbjct: 200 TPQQCYRWGCGGWQSACCTTNISV 223
>At4g20160.1 68417.m02949 expressed protein ; expression supported by
MPSS
Length = 1188
Score = 30.3 bits (65), Expect = 0.64
Identities = 27/128 (21%), Positives = 53/128 (41%), Gaps = 1/128 (0%)
Frame = -1
Query: 454 SRKKSESMMKNLIKR*HKRYEQ*RITKDQKERTRERLLLQ*AMMIQLSRSMSQAIQSKVK 275
S + SE+ I+R E+ ++ +E+ +ER LQ + R+ +++
Sbjct: 778 SLRNSEAKSTKEIERQEVTQEEKSVSHGSREKDKERNSLQYGEKMCFLRNSEAKSTKEIE 837
Query: 274 R**LRRTNRHSNKNNIT*YISVRLRNLCGTRDSPRTS-TPNDKSLLVTPKDERSASKQKN 98
R + ++ + S + +N D T PNDK + P+DE S ++
Sbjct: 838 RNKSQEVSQGEESASHGSRESAKEKNSSQQDDETSTHRNPNDKKGIKEPEDEESKKVERE 897
Query: 97 KPGRSSTE 74
+ G + E
Sbjct: 898 ETGENVEE 905
>At1g14685.3 68414.m01750 expressed protein
Length = 279
Score = 30.3 bits (65), Expect = 0.64
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 136 SPEEIYRWGC*FWESLWC 189
+P++ YRWGC W+S C
Sbjct: 196 APQQCYRWGCGGWQSACC 213
>At1g14685.2 68414.m01749 expressed protein
Length = 279
Score = 30.3 bits (65), Expect = 0.64
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 136 SPEEIYRWGC*FWESLWC 189
+P++ YRWGC W+S C
Sbjct: 196 APQQCYRWGCGGWQSACC 213
>At1g14685.1 68414.m01748 expressed protein
Length = 279
Score = 30.3 bits (65), Expect = 0.64
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 136 SPEEIYRWGC*FWESLWC 189
+P++ YRWGC W+S C
Sbjct: 196 APQQCYRWGCGGWQSACC 213
>At5g49740.1 68418.m06159 ferric reductase-like transmembrane
component family protein similar to ferric-chelate
reductase (FRO1) [Pisum sativum] GI:15341529; contains
Pfam profile PF01794: Ferric reductase like
transmembrane componenent
Length = 747
Score = 29.9 bits (64), Expect = 0.84
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 353 SGSFFLIFGNPLLLVSFVLSFYQIFHHRLAFFSR 454
+GS FLIF P+L+++ + S Y I F++
Sbjct: 77 TGSMFLIFSGPILVIAILASLYLIISGEETVFTK 110
>At1g68120.1 68414.m07781 expressed protein
Length = 270
Score = 29.9 bits (64), Expect = 0.84
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 139 PEEIYRWGC*FWESLWC 189
P++ YRWGC W+S C
Sbjct: 188 PQQCYRWGCGGWQSACC 204
>At2g39320.1 68415.m04827 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 189
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 452 EKKKRVDDEKSDKKITQKIRAIKDYQRSKRKNQR 351
EKKK +D+K DK+ +K + K+ + K K R
Sbjct: 148 EKKKDKEDKKKDKEDKKKAKVQKEKKEKKEKKNR 181
>At5g62640.1 68418.m07862 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 520
Score = 28.3 bits (60), Expect = 2.6
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -1
Query: 214 SVRLRNLCGTRDSPRTSTPNDKSLLVTPKDERSASKQKNKPGRSS 80
SVR+R T P+ T SL TP+ SA+ K +P ++S
Sbjct: 449 SVRVRRESATVTKPKPKTSIASSLSFTPRAMASAATVKVEPAKTS 493
>At1g52155.1 68414.m05886 expressed protein
Length = 235
Score = 27.9 bits (59), Expect = 3.4
Identities = 9/16 (56%), Positives = 15/16 (93%)
Frame = +2
Query: 386 LLLVSFVLSFYQIFHH 433
LL++++++SFY IFHH
Sbjct: 66 LLILNYMISFYVIFHH 81
>At5g49730.1 68418.m06158 ferric reductase-like transmembrane
component family protein similar to ferric-chelate
reductase (FRO1) [Pisum sativum] GI:15341529; contains
Pfam profile PF01794: Ferric reductase like
transmembrane componenent
Length = 738
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 353 SGSFFLIFGNPLLLVSFVLSFYQI 424
+G+ FLIF P+L++S + S Y I
Sbjct: 68 TGTMFLIFSCPILVISVLASLYLI 91
>At1g65280.1 68414.m07402 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226
DnaJ domain
Length = 598
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = -3
Query: 452 EKKKRVDDEKSDKKITQKIRAIKDYQRSKRKNQR 351
EK+++ + E+ KKI +K R +D ++ K+ +R
Sbjct: 56 EKRRKREKERKRKKIERKERKRRDMKKKKKTKKR 89
>At1g05570.1 68414.m00575 callose synthase 1 (CALS1) /
1,3-beta-glucan synthase 1 nearly identical to callose
synthase 1 catalytic subunit [Arabidopsis thaliana]
GI:13649388
Length = 1922
Score = 27.5 bits (58), Expect = 4.5
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +1
Query: 19 YFWNSFSFHVYSCFPCFVSLWSSCLVYFFVLMRIFHLLAS 138
Y W+ F H + ++LWS ++ +F+ +I++ + S
Sbjct: 672 YSWHEFFPHAKNNLGVVIALWSPVILVYFMDTQIWYAIVS 711
>At4g38250.1 68417.m05402 amino acid transporter family protein low
similarity to lysosomal amino acid transporter 1 [Rattus
norvegicus] GI:14571904; contains Pfam profile PF01490:
Transmembrane amino acid transporter protein
Length = 436
Score = 27.1 bits (57), Expect = 5.9
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +1
Query: 58 FPCFVSLW--SSCLVYFFVLMRIFHLLASPEEI 150
F F+SL S+C V FVL +FHLL EE+
Sbjct: 369 FADFLSLVGSSTCCVLGFVLPALFHLLVFKEEM 401
>At1g17480.1 68414.m02145 calmodulin-binding family protein low
similarity to SF16 protein [Helianthus annuus]
GI:560150; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 371
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -2
Query: 129 KMKDPHQNKKINQAGAPQRDKAGKARVDMKREGIPK 22
++KDP + + G+P+ K K ++ MK+EG K
Sbjct: 164 ELKDPVKQTEKGWCGSPRSIKEVKTKLQMKQEGAIK 199
>At5g60530.1 68418.m07590 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 439
Score = 26.6 bits (56), Expect = 7.8
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -3
Query: 452 EKKKRVDDEKSDKKITQKIRAIKDYQRSKRKNQ 354
EKK +++ EK DK+ +K R K+ + ++K++
Sbjct: 97 EKKDKLEKEKKDKERKEKERKEKERKAKEKKDK 129
>At5g40010.1 68418.m04852 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 514
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = -3
Query: 452 EKKKRVDDEKSDKKITQKIRAIKDYQRSKRKNQR 351
E K+R++DE+ KK ++I+ K ++ +K ++
Sbjct: 469 EAKRRIEDEEKKKKEEEEIKRKKREEKKIKKEEK 502
>At5g04670.1 68418.m00475 expressed protein BRL protein, Homo
sapiens, EMBL:AF005067
Length = 766
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = -3
Query: 449 KKKRVDDEKSDKKITQKIRAIKDYQRSKRKNQR 351
K+KR+ + S + + +R++K Y+R ++ +QR
Sbjct: 122 KRKRLCEPSSSDRSEEPLRSLKFYRRRRKLSQR 154
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,785,808
Number of Sequences: 28952
Number of extensions: 136338
Number of successful extensions: 554
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 742437000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -